RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 J3QLI3 93 aa3.27□□□□□ -1.89
RBM39-227ENST00000470563 LINC00694P0DN24 101 aa3.27□□□□□ -1.89
RBM39-227ENST00000470563 CMC4P56277 68 aaPredicted RBP3.27□□□□□ -1.89
RBM39-227ENST00000470563 SMCR5Q8TEV8 140 aa3.27□□□□□ -1.89
RBM39-227ENST00000470563 CNOT1A5YKK6 2376 aaKnown RBP3.27□□□□□ -1.89
RBM39-227ENST00000470563 ACACAQ13085 2346 aa3.27□□□□□ -1.89
RBM39-227ENST00000470563 NCOR1O75376 2440 aa3.27□□□□□ -1.89
RBM39-227ENST00000470563 XIRP2A4UGR9 3374 aa3.26□□□□□ -1.89
RBM39-227ENST00000470563 GPR179Q6PRD1 2367 aa3.26□□□□□ -1.89
RBM39-227ENST00000470563 SPTBN5Q9NRC6 3674 aaKnown RBP3.26□□□□□ -1.89
RBM39-227ENST00000470563 IGKV3-7A0A075B6H7 116 aa3.26□□□□□ -1.89
RBM39-227ENST00000470563 TRAV12-2A0A075B6T6 113 aa3.26□□□□□ -1.89
RBM39-227ENST00000470563 F5H768 121 aa3.26□□□□□ -1.89
RBM39-227ENST00000470563 MSMBP08118 114 aa3.26□□□□□ -1.89
RBM39-227ENST00000470563 ATP5EP56381 51 aaPredicted RBP3.26□□□□□ -1.89
RBM39-227ENST00000470563 DEFB1P60022 68 aa3.26□□□□□ -1.89
RBM39-227ENST00000470563 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
RBM39-227ENST00000470563 LINC00167Q96N53 147 aa3.26□□□□□ -1.89
RBM39-227ENST00000470563 ORMDL1Q9P0S3 153 aa3.26□□□□□ -1.89
RBM39-227ENST00000470563 ABCA2Q9BZC7 2435 aa3.25□□□□□ -1.89
RBM39-227ENST00000470563 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.25□□□□□ -1.89
RBM39-227ENST00000470563 IGKV2-29A2NJV5 120 aaPredicted RBP3.25□□□□□ -1.89
RBM39-227ENST00000470563 B4DSR2 109 aa3.25□□□□□ -1.89
RBM39-227ENST00000470563 TMEM256-PLSCR3K7ERE1 68 aa3.25□□□□□ -1.89
RBM39-227ENST00000470563 UBE2L6O14933 153 aa3.25□□□□□ -1.89
RBM39-227ENST00000470563 CCKP06307 115 aa3.25□□□□□ -1.89
RBM39-227ENST00000470563 RNASE13Q5GAN3 156 aaKnown RBP3.25□□□□□ -1.89
RBM39-227ENST00000470563 LYPD5Q6UWN5 251 aa3.25□□□□□ -1.89
RBM39-227ENST00000470563 SOSTDC1Q6X4U4 206 aa3.25□□□□□ -1.89
RBM39-227ENST00000470563 FAM19A5Q7Z5A7 132 aaPredicted RBP3.25□□□□□ -1.89
RBM39-227ENST00000470563 C10orf105Q8TEF2 133 aa3.25□□□□□ -1.89
RBM39-227ENST00000470563 COX7B2Q8TF08 81 aa3.25□□□□□ -1.89
RBM39-227ENST00000470563 UPK3BQ9BT76 320 aa3.25□□□□□ -1.89
RBM39-227ENST00000470563 TMEM243Q9BU79 118 aa3.25□□□□□ -1.89
RBM39-227ENST00000470563 SND1-IT1Q9HBX3 110 aa3.25□□□□□ -1.89
RBM39-227ENST00000470563 C8orf17Q9NRJ1 99 aa3.25□□□□□ -1.89
RBM39-227ENST00000470563 CDC42SE2Q9NRR3 84 aa3.25□□□□□ -1.89
RBM39-227ENST00000470563 C22orf24Q9Y442 160 aa3.25□□□□□ -1.89
RBM39-227ENST00000470563 RP1L1Q8IWN7 2480 aaPredicted RBP3.25□□□□□ -1.89
RBM39-227ENST00000470563 CEP250Q9BV73 2442 aa3.24□□□□□ -1.89
RBM39-227ENST00000470563 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
RBM39-227ENST00000470563 NDUFC1O43677 76 aa3.24□□□□□ -1.89
RBM39-227ENST00000470563 PDE6GP18545 87 aa3.24□□□□□ -1.89
RBM39-227ENST00000470563 NPC2P61916 151 aa3.24□□□□□ -1.89
RBM39-227ENST00000470563 LY6EQ16553 131 aa3.24□□□□□ -1.89
RBM39-227ENST00000470563 BRD3OSQ6XYD6 125 aa3.24□□□□□ -1.89
RBM39-227ENST00000470563 TMEM86BQ8N661 226 aa3.24□□□□□ -1.89
RBM39-227ENST00000470563 DPH3Q96FX2 82 aa3.24□□□□□ -1.89
RBM39-227ENST00000470563 TRIOO75962 3097 aa3.24□□□□□ -1.89
RBM39-227ENST00000470563 VCANP13611 3396 aa3.23□□□□□ -1.89
RBM39-227ENST00000470563 USP34Q70CQ2 3546 aa3.23□□□□□ -1.89
RBM39-227ENST00000470563 IGLV4-60A0A075B6I1 120 aa3.23□□□□□ -1.89
RBM39-227ENST00000470563 SMIM26A0A096LP01 95 aa3.23□□□□□ -1.89
RBM39-227ENST00000470563 LOC107984640A0A0U1RRK4 108 aa3.23□□□□□ -1.89
RBM39-227ENST00000470563 TRBV6-4A0A1B0GX49 114 aa3.23□□□□□ -1.89
RBM39-227ENST00000470563 DEFB131AP59861 70 aa3.23□□□□□ -1.89
RBM39-227ENST00000470563 BLCAPP62952 87 aa3.23□□□□□ -1.89
RBM39-227ENST00000470563 COX6A2Q02221 97 aa3.23□□□□□ -1.89
RBM39-227ENST00000470563 COX17Q14061 63 aa3.23□□□□□ -1.89
RBM39-227ENST00000470563 RBMY1FQ15415 496 aaKnown RBP3.23□□□□□ -1.89
RBM39-227ENST00000470563 Q8N2B8 174 aa3.23□□□□□ -1.89
RBM39-227ENST00000470563 MIR7-3HGQ8N6C7 128 aa3.23□□□□□ -1.89
RBM39-227ENST00000470563 SMIM11BQ8TCY0 68 aa3.23□□□□□ -1.89
RBM39-227ENST00000470563 C4orf3Q8WVX3 66 aa3.23□□□□□ -1.89
RBM39-227ENST00000470563 CCL19Q99731 98 aa3.23□□□□□ -1.89
RBM39-227ENST00000470563 UBL5Q9BZL1 73 aa3.23□□□□□ -1.89
RBM39-227ENST00000470563 SERP1Q9Y6X1 66 aa3.23□□□□□ -1.89
RBM39-227ENST00000470563 EP300Q09472 2414 aaPredicted RBP3.23□□□□□ -1.89
RBM39-227ENST00000470563 COL6A6A6NMZ7 2263 aa3.23□□□□□ -1.89
RBM39-227ENST00000470563 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.22□□□□□ -1.896e-9■■■■□ 20.5
RBM39-227ENST00000470563 IGKV2-28A0A075B6P5 120 aa3.22□□□□□ -1.89
RBM39-227ENST00000470563 TRAV7A0A075B6U4 112 aa3.22□□□□□ -1.89
RBM39-227ENST00000470563 LOC110117498A0A087WWA1 95 aa3.22□□□□□ -1.89
RBM39-227ENST00000470563 IGHV3-73A0A0B4J1V6 119 aa3.22□□□□□ -1.89
RBM39-227ENST00000470563 TRAV13-1A0A0B4J241 112 aa3.22□□□□□ -1.89
RBM39-227ENST00000470563 IGKV2D-28P01615 120 aa3.22□□□□□ -1.89
RBM39-227ENST00000470563 Q8IZM0 81 aa3.22□□□□□ -1.89
RBM39-227ENST00000470563 LINC00337Q8N6G1 96 aa3.22□□□□□ -1.89
RBM39-227ENST00000470563 SPANXA2-OT1Q8N9U9 137 aa3.22□□□□□ -1.89
RBM39-227ENST00000470563 DYNLRB2Q8TF09 96 aa3.22□□□□□ -1.89
RBM39-227ENST00000470563 C14orf132Q9NPU4 83 aa3.22□□□□□ -1.89
RBM39-227ENST00000470563 LINC00846Q9NV44 126 aa3.22□□□□□ -1.89
RBM39-227ENST00000470563 V9GYY9 64 aa3.22□□□□□ -1.89
RBM39-227ENST00000470563 SPTBN1Q01082 2364 aaKnown RBP3.21□□□□□ -1.9
RBM39-227ENST00000470563 FAM236DA0A1B0GTK5 79 aa3.21□□□□□ -1.9
RBM39-227ENST00000470563 KNCNA6PVL3 124 aa3.21□□□□□ -1.9
RBM39-227ENST00000470563 LECT2O14960 151 aa3.21□□□□□ -1.9
RBM39-227ENST00000470563 ERC2-IT1O76042 136 aa3.21□□□□□ -1.9
RBM39-227ENST00000470563 FAM236CP0DP71 79 aa3.21□□□□□ -1.9
RBM39-227ENST00000470563 CCL18P55774 89 aa3.21□□□□□ -1.9
RBM39-227ENST00000470563 KRTAP12-2P59991 146 aa3.21□□□□□ -1.9
RBM39-227ENST00000470563 DEFB104AQ8WTQ1 72 aa3.21□□□□□ -1.9
RBM39-227ENST00000470563 CACNA1HO95180 2353 aa3.2□□□□□ -1.9
RBM39-227ENST00000470563 WDFY3Q8IZQ1 3526 aa3.2□□□□□ -1.9
RBM39-227ENST00000470563 PIEZO2Q9H5I5 2752 aa3.2□□□□□ -1.9
RBM39-227ENST00000470563 IGKV2D-24A0A075B6R9 120 aa3.2□□□□□ -1.9
RBM39-227ENST00000470563 TRGV1A0A0A0MS02 117 aa3.2□□□□□ -1.9
RBM39-227ENST00000470563 ATP5J2P56134 94 aa3.2□□□□□ -1.9
RBM39-227ENST00000470563 LINC00158P58513 81 aa3.2□□□□□ -1.9
RBM39-227ENST00000470563 KLKP1Q107X0 134 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms