RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 KIAA1644Q3SXP7 199 aa18.94■□□□□ 0.62
HMG20B-209ENST00000470356 GEMIN7Q9H840 131 aaKnown RBP18.94■□□□□ 0.62
HMG20B-209ENST00000470356 RNF213Q63HN8 5207 aa18.93■□□□□ 0.62
HMG20B-209ENST00000470356 TRAV9-1A0A075B6T8 112 aa18.93■□□□□ 0.62
HMG20B-209ENST00000470356 ADCYAP1P18509 176 aa18.92■□□□□ 0.62
HMG20B-209ENST00000470356 UQCC3Q6UW78 93 aa18.91■□□□□ 0.62
HMG20B-209ENST00000470356 ERASQ7Z444 233 aa18.91■□□□□ 0.62
HMG20B-209ENST00000470356 TMEM218A2RU14 115 aa18.89■□□□□ 0.61
HMG20B-209ENST00000470356 LINC00469Q8N7U9 141 aa18.89■□□□□ 0.61
HMG20B-209ENST00000470356 F8VRH5 84 aa18.88■□□□□ 0.61
HMG20B-209ENST00000470356 SCGB3A1Q96QR1 104 aa18.88■□□□□ 0.61
HMG20B-209ENST00000470356 IGLV1-50A0A075B6I6 118 aa18.87■□□□□ 0.61
HMG20B-209ENST00000470356 KRTAP1-4P0C5Y4 121 aa18.87■□□□□ 0.61
HMG20B-209ENST00000470356 XAGE1AQ9HD64 81 aa18.86■□□□□ 0.61
HMG20B-209ENST00000470356 C22orf24Q9Y442 160 aa18.85■□□□□ 0.61
HMG20B-209ENST00000470356 CXCL5P42830 114 aa18.84■□□□□ 0.61
HMG20B-209ENST00000470356 GNB1LQ9BYB4 327 aa18.84■□□□□ 0.61
HMG20B-209ENST00000470356 LINC01546A6NGU7 62 aa18.83■□□□□ 0.6
HMG20B-209ENST00000470356 LINC01549A6NIU2 74 aa18.83■□□□□ 0.6
HMG20B-209ENST00000470356 TINCRA0A1B0GVN0 87 aa18.82■□□□□ 0.6
HMG20B-209ENST00000470356 LBHQ53QV2 105 aaPredicted RBP18.82■□□□□ 0.6
HMG20B-209ENST00000470356 SMIM1B2RUZ4 78 aa18.81■□□□□ 0.6
HMG20B-209ENST00000470356 S100PP25815 95 aa18.81■□□□□ 0.6
HMG20B-209ENST00000470356 PDZD11Q5EBL8 140 aa18.8■□□□□ 0.6
HMG20B-209ENST00000470356 SEC11CQ9BY50 192 aa18.8■□□□□ 0.6
HMG20B-209ENST00000470356 IGLV5-45A0A087WSX0 123 aa18.79■□□□□ 0.6
HMG20B-209ENST00000470356 NUPR1O60356 82 aa18.79■□□□□ 0.6
HMG20B-209ENST00000470356 ZNF861PO60384 105 aa18.79■□□□□ 0.6
HMG20B-209ENST00000470356 CST9LQ9H4G1 147 aa18.78■□□□□ 0.6
HMG20B-209ENST00000470356 TP73-AS1Q9UF72 201 aa18.78■□□□□ 0.6
HMG20B-209ENST00000470356 IFITM2Q01629 132 aa18.77■□□□□ 0.6
HMG20B-209ENST00000470356 COX7B2Q8TF08 81 aa18.77■□□□□ 0.6
HMG20B-209ENST00000470356 COX19Q49B96 90 aa18.76■□□□□ 0.59
HMG20B-209ENST00000470356 RPL13AP40429 203 aaKnown RBP18.75■□□□□ 0.59
HMG20B-209ENST00000470356 MRPL55Q7Z7F7 128 aaKnown RBP18.74■□□□□ 0.59
HMG20B-209ENST00000470356 CARHSP1Q9Y2V2 147 aaKnown RBP18.74■□□□□ 0.59
HMG20B-209ENST00000470356 PMVKQ15126 192 aa18.72■□□□□ 0.59
HMG20B-209ENST00000470356 FA2HQ7L5A8 372 aa18.71■□□□□ 0.59
HMG20B-209ENST00000470356 MRPL18Q9H0U6 180 aaKnown RBP18.7■□□□□ 0.58
HMG20B-209ENST00000470356 SPINK8P0C7L1 97 aa18.69■□□□□ 0.58
HMG20B-209ENST00000470356 FABP9Q0Z7S8 132 aa18.69■□□□□ 0.58
HMG20B-209ENST00000470356 SMCO4Q9NRQ5 59 aa18.69■□□□□ 0.58
HMG20B-209ENST00000470356 LPAP08519 4548 aa18.67■□□□□ 0.58
HMG20B-209ENST00000470356 BCE1O60756 84 aa18.66■□□□□ 0.58
HMG20B-209ENST00000470356 LINC00167Q96N53 147 aa18.66■□□□□ 0.58
HMG20B-209ENST00000470356 C10orf91Q5T1B1 145 aa18.65■□□□□ 0.58
HMG20B-209ENST00000470356 H3BRM9 83 aa18.64■□□□□ 0.57
HMG20B-209ENST00000470356 RPL28P46779 137 aaKnown RBP18.64■□□□□ 0.57
HMG20B-209ENST00000470356 COMMD7Q86VX2 200 aa18.64■□□□□ 0.57
HMG20B-209ENST00000470356 RAB5BP61020 215 aa18.63■□□□□ 0.57
HMG20B-209ENST00000470356 RPL37AP8A6NKH3 93 aa18.62■□□□□ 0.57
HMG20B-209ENST00000470356 RHEBQ15382 184 aa18.62■□□□□ 0.57
HMG20B-209ENST00000470356 IGLV5-37A0A075B6J1 123 aa18.61■□□□□ 0.57
HMG20B-209ENST00000470356 RPS10P5Q9NQ39 176 aa18.61■□□□□ 0.57
HMG20B-209ENST00000470356 ATP5LO75964 103 aa18.59■□□□□ 0.57
HMG20B-209ENST00000470356 IGLC3P0DOY3 106 aa18.59■□□□□ 0.57
HMG20B-209ENST00000470356 GAGE10A6NGK3 116 aa18.58■□□□□ 0.56
HMG20B-209ENST00000470356 A0A096LNJ9 63 aa18.57■□□□□ 0.56
HMG20B-209ENST00000470356 IGLV5-39A0A0G2JS06 123 aa18.57■□□□□ 0.56
HMG20B-209ENST00000470356 NKAPP1Q8N9T2 125 aa18.55■□□□□ 0.56
HMG20B-209ENST00000470356 NDUFA6P56556 154 aa18.54■□□□□ 0.56
HMG20B-209ENST00000470356 URB1-AS1Q96HZ7 61 aa18.54■□□□□ 0.56
HMG20B-209ENST00000470356 LINC00614P0C842 121 aa18.53■□□□□ 0.56
HMG20B-209ENST00000470356 C18orf32Q8TCD1 76 aa18.53■□□□□ 0.56
HMG20B-209ENST00000470356 A0A087X002 238 aa18.52■□□□□ 0.56
HMG20B-209ENST00000470356 PRR4Q16378 134 aa18.52■□□□□ 0.56
HMG20B-209ENST00000470356 TRAPPC1Q9Y5R8 145 aa18.52■□□□□ 0.56
HMG20B-209ENST00000470356 ZNF22P17026 224 aaPredicted RBP18.51■□□□□ 0.55
HMG20B-209ENST00000470356 PFN2P35080 140 aa18.51■□□□□ 0.55
HMG20B-209ENST00000470356 CRYGAP11844 174 aa18.5■□□□□ 0.55
HMG20B-209ENST00000470356 KRTAP13-1Q8IUC0 172 aa18.5■□□□□ 0.55
HMG20B-209ENST00000470356 HBDP02042 147 aa18.49■□□□□ 0.55
HMG20B-209ENST00000470356 UBE2AP49459 152 aa18.47■□□□□ 0.55
HMG20B-209ENST00000470356 ERG28Q9UKR5 140 aa18.46■□□□□ 0.55
HMG20B-209ENST00000470356 SCO1O75880 301 aa18.45■□□□□ 0.54
HMG20B-209ENST00000470356 TSPAN13O95857 204 aa18.45■□□□□ 0.54
HMG20B-209ENST00000470356 COX17Q14061 63 aa18.45■□□□□ 0.54
HMG20B-209ENST00000470356 PMCHL1Q16048 86 aa18.45■□□□□ 0.54
HMG20B-209ENST00000470356 SND1-IT1Q9HBX3 110 aa18.45■□□□□ 0.54
HMG20B-209ENST00000470356 IGKV2-28A0A075B6P5 120 aa18.44■□□□□ 0.54
HMG20B-209ENST00000470356 IGKV2D-28P01615 120 aa18.44■□□□□ 0.54
HMG20B-209ENST00000470356 TYMSOSQ8TAI1 123 aa18.44■□□□□ 0.54
HMG20B-209ENST00000470356 VPREB1P12018 145 aa18.42■□□□□ 0.54
HMG20B-209ENST00000470356 BAGE3Q86Y29 109 aa18.42■□□□□ 0.54
HMG20B-209ENST00000470356 C11orf86A6NJI1 115 aa18.41■□□□□ 0.54
HMG20B-209ENST00000470356 ANAPC11Q9NYG5 84 aa18.41■□□□□ 0.54
HMG20B-209ENST00000470356 SFTA2Q6UW10 78 aa18.4■□□□□ 0.54
HMG20B-209ENST00000470356 RPL24P83731 157 aaKnown RBP18.39■□□□□ 0.53
HMG20B-209ENST00000470356 ZNF625Q96I27 306 aaPredicted RBP18.39■□□□□ 0.53
HMG20B-209ENST00000470356 TMEM170BQ5T4T1 132 aa18.38■□□□□ 0.53
HMG20B-209ENST00000470356 APOC3P02656 99 aa18.37■□□□□ 0.53
HMG20B-209ENST00000470356 FAM229BQ4G0N7 80 aa18.37■□□□□ 0.53
HMG20B-209ENST00000470356 KRTAP13-2Q52LG2 175 aa18.36■□□□□ 0.53
HMG20B-209ENST00000470356 TMEM126AQ9H061 195 aa18.35■□□□□ 0.53
HMG20B-209ENST00000470356 SNAPINO95295 136 aa18.33■□□□□ 0.52
HMG20B-209ENST00000470356 TMEM238C9JI98 176 aa18.32■□□□□ 0.52
HMG20B-209ENST00000470356 PRLHP81277 87 aa18.32■□□□□ 0.52
HMG20B-209ENST00000470356 SVBPQ8N300 66 aa18.32■□□□□ 0.52
HMG20B-209ENST00000470356 Q8NDZ9 215 aa18.32■□□□□ 0.52
HMG20B-209ENST00000470356 CHTOPQ9Y3Y2 248 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms