RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 SSNA1O43805 119 aa2.6□□□□□ -1.99
VPS8-219ENST00000469479 RPS20P60866 119 aaKnown RBP2.6□□□□□ -1.99
VPS8-219ENST00000469479 SERF2P84101 59 aa2.6□□□□□ -1.99
VPS8-219ENST00000469479 KRTAP13-2Q52LG2 175 aa2.6□□□□□ -1.99
VPS8-219ENST00000469479 ENKURQ8TC29 256 aa2.6□□□□□ -1.99
VPS8-219ENST00000469479 PPP1R1CQ8WVI7 109 aa2.6□□□□□ -1.99
VPS8-219ENST00000469479 MRAP2Q96G30 205 aa2.6□□□□□ -1.99
VPS8-219ENST00000469479 MARVELD1Q9BSK0 173 aa2.6□□□□□ -1.99
VPS8-219ENST00000469479 PSMG3Q9BT73 122 aaPredicted RBP2.6□□□□□ -1.99
VPS8-219ENST00000469479 CCDC32Q9BV29 185 aa2.6□□□□□ -1.99
VPS8-219ENST00000469479 ACTR3CQ9C0K3 210 aaPredicted RBP2.6□□□□□ -1.99
VPS8-219ENST00000469479 CYTL1Q9NRR1 136 aa2.6□□□□□ -1.99
VPS8-219ENST00000469479 LINC00846Q9NV44 126 aa2.6□□□□□ -1.99
VPS8-219ENST00000469479 TP73-AS1Q9UF72 201 aa2.6□□□□□ -1.99
VPS8-219ENST00000469479 HSPB11Q9Y547 144 aa2.6□□□□□ -1.99
VPS8-219ENST00000469479 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.59□□□□□ -1.99
VPS8-219ENST00000469479 TRBV30A0A0K0K1B3 111 aa2.59□□□□□ -1.99
VPS8-219ENST00000469479 IGKV2-29A2NJV5 120 aaPredicted RBP2.59□□□□□ -1.99
VPS8-219ENST00000469479 CTRLP40313 264 aa2.59□□□□□ -1.99
VPS8-219ENST00000469479 CCL20P78556 96 aa2.59□□□□□ -1.99
VPS8-219ENST00000469479 C6orf226Q5I0X4 101 aa2.59□□□□□ -1.99
VPS8-219ENST00000469479 RPL7L1Q6DKI1 246 aaKnown RBP2.59□□□□□ -1.99
VPS8-219ENST00000469479 TMUB2Q71RG4 321 aa2.59□□□□□ -1.99
VPS8-219ENST00000469479 STOML3Q8TAV4 291 aa2.59□□□□□ -1.99
VPS8-219ENST00000469479 PACRGQ96M98 296 aaPredicted RBP2.59□□□□□ -1.99
VPS8-219ENST00000469479 CDC42SE2Q9NRR3 84 aa2.59□□□□□ -1.99
VPS8-219ENST00000469479 USH2AO75445 5202 aa2.58□□□□□ -2
VPS8-219ENST00000469479 MACF1Q9UPN3 7388 aaKnown RBP2.58□□□□□ -2
VPS8-219ENST00000469479 E9PLD3 99 aa2.58□□□□□ -2
VPS8-219ENST00000469479 NDUFC2-KCTD14E9PQ53 114 aa2.58□□□□□ -2
VPS8-219ENST00000469479 I3L3M4 83 aa2.58□□□□□ -2
VPS8-219ENST00000469479 ATP5LO75964 103 aa2.58□□□□□ -2
VPS8-219ENST00000469479 MPC2O95563 127 aa2.58□□□□□ -2
VPS8-219ENST00000469479 AKR1C3P42330 323 aa2.58□□□□□ -2
VPS8-219ENST00000469479 DEFA1P59665 94 aa2.58□□□□□ -2
VPS8-219ENST00000469479 KRTAP19-2Q3LHN2 52 aa2.58□□□□□ -2
VPS8-219ENST00000469479 SMIM15Q7Z3B0 74 aa2.58□□□□□ -2
VPS8-219ENST00000469479 MTURNQ8N3F0 131 aa2.58□□□□□ -2
VPS8-219ENST00000469479 TNFSF18Q9UNG2 199 aa2.58□□□□□ -2
VPS8-219ENST00000469479 CSDC2Q9Y534 153 aaKnown RBP2.58□□□□□ -2
VPS8-219ENST00000469479 SYNE2Q8WXH0 6885 aaKnown RBP2.58□□□□□ -2
VPS8-219ENST00000469479 FXYD6-FXYD2A0A087WZ82 144 aa2.57□□□□□ -2
VPS8-219ENST00000469479 MUC21A0A140T8X8 626 aa2.57□□□□□ -2
VPS8-219ENST00000469479 RAB19A4D1S5 217 aa2.57□□□□□ -2
VPS8-219ENST00000469479 SDHAF1A6NFY7 115 aa2.57□□□□□ -2
VPS8-219ENST00000469479 KRTAP4-16G5E9R7 235 aaPredicted RBP2.57□□□□□ -2
VPS8-219ENST00000469479 SPINK1P00995 79 aa2.57□□□□□ -2
VPS8-219ENST00000469479 UBE2AP49459 152 aa2.57□□□□□ -2
VPS8-219ENST00000469479 COX6B2Q6YFQ2 88 aa2.57□□□□□ -2
VPS8-219ENST00000469479 ORAOV1Q8WV07 137 aa2.57□□□□□ -2
VPS8-219ENST00000469479 DHRS4-AS1Q9P1J3 65 aa2.57□□□□□ -2
VPS8-219ENST00000469479 CTXND1A0A1B0GTU2 59 aa2.56□□□□□ -2
VPS8-219ENST00000469479 C7orf77A4D0Y5 90 aa2.56□□□□□ -2
VPS8-219ENST00000469479 ARPC5O15511 151 aa2.56□□□□□ -2
VPS8-219ENST00000469479 IGLC6P0CF74 106 aa2.56□□□□□ -2
VPS8-219ENST00000469479 PMCHP20382 165 aa2.56□□□□□ -2
VPS8-219ENST00000469479 ATP6V0CP27449 155 aa2.56□□□□□ -2
VPS8-219ENST00000469479 UBE2G2P60604 165 aa2.56□□□□□ -2
VPS8-219ENST00000469479 RPS29P62273 56 aaKnown RBP2.56□□□□□ -2
VPS8-219ENST00000469479 LYZL1Q6UWQ5 148 aa2.56□□□□□ -2
VPS8-219ENST00000469479 MRPL55Q7Z7F7 128 aaKnown RBP2.56□□□□□ -2
VPS8-219ENST00000469479 C5orf38Q86SI9 138 aa2.56□□□□□ -2
VPS8-219ENST00000469479 BAGE2Q86Y30 109 aa2.56□□□□□ -2
VPS8-219ENST00000469479 S100ZQ8WXG8 99 aa2.56□□□□□ -2
VPS8-219ENST00000469479 GNB1LQ9BYB4 327 aa2.56□□□□□ -2
VPS8-219ENST00000469479 C6orf48Q9UBA6 75 aa2.56□□□□□ -2
VPS8-219ENST00000469479 C22orf24Q9Y442 160 aa2.56□□□□□ -2
VPS8-219ENST00000469479 IGLV8-61A0A075B6I0 122 aa2.55□□□□□ -2
VPS8-219ENST00000469479 TRAV13-1A0A0B4J241 112 aa2.55□□□□□ -2
VPS8-219ENST00000469479 TRBV6-5A0A0K0K1A5 114 aa2.55□□□□□ -2
VPS8-219ENST00000469479 IFNA1P01562 189 aa2.55□□□□□ -2
VPS8-219ENST00000469479 C9orf129Q5T035 196 aaKnown RBP2.55□□□□□ -2
VPS8-219ENST00000469479 UNQ6190/PRO20217Q6UXQ8 127 aa2.55□□□□□ -2
VPS8-219ENST00000469479 GATD1Q8NB37 220 aa2.55□□□□□ -2
VPS8-219ENST00000469479 TGIF2-C20orf24A0A0A6YYL0 155 aa2.54□□□□□ -2
VPS8-219ENST00000469479 TRBV27A0A0K0K1C4 114 aa2.54□□□□□ -2
VPS8-219ENST00000469479 A0A1B0GWB2 263 aa2.54□□□□□ -2
VPS8-219ENST00000469479 C9JQL5 133 aa2.54□□□□□ -2
VPS8-219ENST00000469479 SLC25A20O43772 301 aa2.54□□□□□ -2
VPS8-219ENST00000469479 PFDN1O60925 122 aa2.54□□□□□ -2
VPS8-219ENST00000469479 KRTAP13-1Q8IUC0 172 aa2.54□□□□□ -2
VPS8-219ENST00000469479 C9orf62Q8N4C0 152 aa2.54□□□□□ -2
VPS8-219ENST00000469479 SMIM12Q96EX1 92 aa2.54□□□□□ -2
VPS8-219ENST00000469479 TIMM21Q9BVV7 248 aa2.54□□□□□ -2
VPS8-219ENST00000469479 CNFNQ9BYD5 112 aa2.54□□□□□ -2
VPS8-219ENST00000469479 GEMIN7Q9H840 131 aaKnown RBP2.54□□□□□ -2
VPS8-219ENST00000469479 ST20Q9HBF5 79 aa2.54□□□□□ -2
VPS8-219ENST00000469479 BIN3Q9NQY0 253 aa2.54□□□□□ -2
VPS8-219ENST00000469479 ZNF706Q9Y5V0 76 aaPredicted RBP2.54□□□□□ -2
VPS8-219ENST00000469479 IGHV3OR16-9A0A0B4J2B5 98 aa2.53□□□□□ -2
VPS8-219ENST00000469479 ZNF727A8MUV8 499 aa2.53□□□□□ -2
VPS8-219ENST00000469479 TCAPO15273 167 aa2.53□□□□□ -2
VPS8-219ENST00000469479 PPP1R17O96001 155 aa2.53□□□□□ -2
VPS8-219ENST00000469479 FCER1GP30273 86 aa2.53□□□□□ -2
VPS8-219ENST00000469479 RPL32P62910 135 aaKnown RBP2.53□□□□□ -2
VPS8-219ENST00000469479 RGS21Q2M5E4 152 aa2.53□□□□□ -2
VPS8-219ENST00000469479 BORCS7-ASMTA0A0B4J1R7 106 aa2.52□□□□□ -2.01
VPS8-219ENST00000469479 MAP1LC3B2A6NCE7 125 aa2.52□□□□□ -2.01
VPS8-219ENST00000469479 GIPP09681 153 aaPredicted RBP2.52□□□□□ -2.01
VPS8-219ENST00000469479 FOXA3P55318 350 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms