RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 TRRAPQ9Y4A5 3859 aa9.95□□□□□ -0.82
SMARCD3-205ENST00000469154 IGLV4-60A0A075B6I1 120 aa9.94□□□□□ -0.82
SMARCD3-205ENST00000469154 IGKV3OR2-268A0A0C4DH90 116 aa9.94□□□□□ -0.82
SMARCD3-205ENST00000469154 IGHV3OR16-9A0A0B4J2B5 98 aa9.94□□□□□ -0.82
SMARCD3-205ENST00000469154 LINC00158P58513 81 aa9.94□□□□□ -0.82
SMARCD3-205ENST00000469154 LINC00337Q8N6G1 96 aa9.94□□□□□ -0.82
SMARCD3-205ENST00000469154 LINC00482Q8N8I6 264 aa9.94□□□□□ -0.82
SMARCD3-205ENST00000469154 A0A087WZ39 114 aa9.93□□□□□ -0.82
SMARCD3-205ENST00000469154 IBA57-AS1B1ANH7 110 aa9.93□□□□□ -0.82
SMARCD3-205ENST00000469154 IGKV2-28A0A075B6P5 120 aa9.93□□□□□ -0.82
SMARCD3-205ENST00000469154 IGKV2D-28P01615 120 aa9.93□□□□□ -0.82
SMARCD3-205ENST00000469154 INAFM2P0DMQ5 153 aa9.93□□□□□ -0.82
SMARCD3-205ENST00000469154 SPATA3Q8NHX4 192 aa9.93□□□□□ -0.82
SMARCD3-205ENST00000469154 IMUPQ9GZP8 106 aa9.92□□□□□ -0.82
SMARCD3-205ENST00000469154 B5MCH6 92 aa9.91□□□□□ -0.82
SMARCD3-205ENST00000469154 C22orf24Q9Y442 160 aa9.91□□□□□ -0.82
SMARCD3-205ENST00000469154 MALP21145 153 aa9.91□□□□□ -0.82
SMARCD3-205ENST00000469154 CCL18P55774 89 aa9.91□□□□□ -0.82
SMARCD3-205ENST00000469154 CCDC179H3BU77 68 aa9.9□□□□□ -0.82
SMARCD3-205ENST00000469154 LINC00643Q86TS7 51 aa9.9□□□□□ -0.82
SMARCD3-205ENST00000469154 KIR2DL5BQ8NHK3 375 aa9.9□□□□□ -0.82
SMARCD3-205ENST00000469154 H0YGX0 51 aa9.9□□□□□ -0.83
SMARCD3-205ENST00000469154 SMIM11BQ8TCY0 68 aa9.9□□□□□ -0.83
SMARCD3-205ENST00000469154 LINC00959A0A1B0GUT2 108 aa9.89□□□□□ -0.83
SMARCD3-205ENST00000469154 DNAL4O96015 105 aa9.89□□□□□ -0.83
SMARCD3-205ENST00000469154 C5orf38Q86SI9 138 aa9.89□□□□□ -0.83
SMARCD3-205ENST00000469154 LINC00612Q8N6U2 182 aa9.88□□□□□ -0.83
SMARCD3-205ENST00000469154 Q9HAA7 133 aa9.88□□□□□ -0.83
SMARCD3-205ENST00000469154 SS18L2Q9UHA2 77 aa9.88□□□□□ -0.83
SMARCD3-205ENST00000469154 SDIM1Q6ZPB5 146 aa9.88□□□□□ -0.83
SMARCD3-205ENST00000469154 SMCR5Q8TEV8 140 aa9.87□□□□□ -0.83
SMARCD3-205ENST00000469154 PFN2P35080 140 aa9.87□□□□□ -0.83
SMARCD3-205ENST00000469154 DEFB130BP0DP73 79 aa9.86□□□□□ -0.83
SMARCD3-205ENST00000469154 DEFB130AP0DP74 79 aa9.86□□□□□ -0.83
SMARCD3-205ENST00000469154 SS18Q15532 418 aa9.86□□□□□ -0.83
SMARCD3-205ENST00000469154 MDFIQ99750 246 aa9.86□□□□□ -0.83
SMARCD3-205ENST00000469154 A0A087WYN8 130 aa9.85□□□□□ -0.83
SMARCD3-205ENST00000469154 A0A1B0GUV1 79 aa9.85□□□□□ -0.83
SMARCD3-205ENST00000469154 PAX4O43316 350 aa9.85□□□□□ -0.83
SMARCD3-205ENST00000469154 GYPEP15421 78 aa9.85□□□□□ -0.83
SMARCD3-205ENST00000469154 C6orf226Q5I0X4 101 aa9.85□□□□□ -0.83
SMARCD3-205ENST00000469154 LINC01561Q8N1V8 128 aa9.85□□□□□ -0.83
SMARCD3-205ENST00000469154 GAGE2AQ6NT46 116 aa9.85□□□□□ -0.83
SMARCD3-205ENST00000469154 Q8IZM0 81 aa9.84□□□□□ -0.83
SMARCD3-205ENST00000469154 FAM236AA0A1B0GUQ0 79 aa9.83□□□□□ -0.84
SMARCD3-205ENST00000469154 FAM236BA0A1B0GV22 79 aa9.83□□□□□ -0.84
SMARCD3-205ENST00000469154 CXCL5P42830 114 aa9.83□□□□□ -0.84
SMARCD3-205ENST00000469154 C9orf66Q5T8R8 295 aa9.83□□□□□ -0.84
SMARCD3-205ENST00000469154 WFDC9Q8NEX5 89 aa9.83□□□□□ -0.84
SMARCD3-205ENST00000469154 XCL1P47992 114 aa9.83□□□□□ -0.84
SMARCD3-205ENST00000469154 OR13C6PQ8NH95 151 aa9.83□□□□□ -0.84
SMARCD3-205ENST00000469154 C11orf68Q9H3H3 251 aaKnown RBP9.83□□□□□ -0.84
SMARCD3-205ENST00000469154 PKD1L1Q8TDX9 2849 aa9.82□□□□□ -0.84
SMARCD3-205ENST00000469154 SMIM9A6NGZ8 99 aa9.82□□□□□ -0.84
SMARCD3-205ENST00000469154 PRO0255Q9UI72 69 aa9.82□□□□□ -0.84
SMARCD3-205ENST00000469154 LECT2O14960 151 aa9.81□□□□□ -0.84
SMARCD3-205ENST00000469154 OBSCN-AS1Q96MR7 158 aa9.81□□□□□ -0.84
SMARCD3-205ENST00000469154 ATP5G1P05496 136 aa9.81□□□□□ -0.84
SMARCD3-205ENST00000469154 X6R8D5 127 aa9.81□□□□□ -0.84
SMARCD3-205ENST00000469154 OXLD1Q5BKU9 147 aa9.78□□□□□ -0.84
SMARCD3-205ENST00000469154 C14orf132Q9NPU4 83 aa9.78□□□□□ -0.84
SMARCD3-205ENST00000469154 ANK2Q01484 3957 aa9.78□□□□□ -0.84
SMARCD3-205ENST00000469154 LYRM9A8MSI8 78 aa9.77□□□□□ -0.84
SMARCD3-205ENST00000469154 CLPSL2Q6UWE3 100 aa9.77□□□□□ -0.84
SMARCD3-205ENST00000469154 KLK5Q9Y337 293 aaPredicted RBP9.77□□□□□ -0.84
SMARCD3-205ENST00000469154 ORMDL1Q9P0S3 153 aa9.77□□□□□ -0.85
SMARCD3-205ENST00000469154 A0A1B0GX51 115 aa9.76□□□□□ -0.85
SMARCD3-205ENST00000469154 COX17Q14061 63 aa9.76□□□□□ -0.85
SMARCD3-205ENST00000469154 NDUFC2O95298 119 aa9.76□□□□□ -0.85
SMARCD3-205ENST00000469154 C9orf129Q5T035 196 aaKnown RBP9.76□□□□□ -0.85
SMARCD3-205ENST00000469154 CD164L2Q6UWJ8 174 aa9.76□□□□□ -0.85
SMARCD3-205ENST00000469154 A0A096LPF7 62 aa9.75□□□□□ -0.85
SMARCD3-205ENST00000469154 LINC00167Q96N53 147 aa9.75□□□□□ -0.85
SMARCD3-205ENST00000469154 WIPF1O43516 503 aa9.74□□□□□ -0.85
SMARCD3-205ENST00000469154 KIAA0087Q14695 138 aa9.74□□□□□ -0.85
SMARCD3-205ENST00000469154 Q6JHZ5 121 aa9.74□□□□□ -0.85
SMARCD3-205ENST00000469154 LINC00269Q8N2A0 174 aa9.74□□□□□ -0.85
SMARCD3-205ENST00000469154 SLPIP03973 132 aa9.73□□□□□ -0.85
SMARCD3-205ENST00000469154 CHCHD10Q8WYQ3 142 aaPredicted RBP9.73□□□□□ -0.85
SMARCD3-205ENST00000469154 TMEM126AQ9H061 195 aa9.73□□□□□ -0.85
SMARCD3-205ENST00000469154 NCR3O14931 201 aa9.73□□□□□ -0.85
SMARCD3-205ENST00000469154 CMYA5Q8N3K9 4069 aa9.73□□□□□ -0.85
SMARCD3-205ENST00000469154 IGHV4-28A0A0C4DH34 117 aa9.72□□□□□ -0.85
SMARCD3-205ENST00000469154 NANOS2P60321 138 aaKnown RBP9.72□□□□□ -0.85
SMARCD3-205ENST00000469154 C3orf22Q8N5N4 141 aa9.72□□□□□ -0.85
SMARCD3-205ENST00000469154 MGAM2Q2M2H8 2515 aa9.71□□□□□ -0.85
SMARCD3-205ENST00000469154 UQCRQO14949 82 aa9.71□□□□□ -0.85
SMARCD3-205ENST00000469154 HIST1H4AP62805 103 aaKnown RBP9.71□□□□□ -0.85
SMARCD3-205ENST00000469154 REG3AQ06141 175 aa9.71□□□□□ -0.85
SMARCD3-205ENST00000469154 NOTCH1P46531 2555 aa9.71□□□□□ -0.86
SMARCD3-205ENST00000469154 ANGP03950 147 aaKnown RBP9.71□□□□□ -0.86
SMARCD3-205ENST00000469154 JMJD7-PLA2G4BH0Y9G9 81 aa9.7□□□□□ -0.86
SMARCD3-205ENST00000469154 Q8N814 137 aa9.7□□□□□ -0.86
SMARCD3-205ENST00000469154 LINC00846Q9NV44 126 aa9.7□□□□□ -0.86
SMARCD3-205ENST00000469154 ATOX1O00244 68 aa9.7□□□□□ -0.86
SMARCD3-205ENST00000469154 KRTAP10-11P60412 298 aa9.7□□□□□ -0.86
SMARCD3-205ENST00000469154 C9orf153Q5TBE3 101 aa9.7□□□□□ -0.86
SMARCD3-205ENST00000469154 CCKP06307 115 aa9.68□□□□□ -0.86
SMARCD3-205ENST00000469154 APOC4P55056 127 aa9.68□□□□□ -0.86
SMARCD3-205ENST00000469154 DAD1P61803 113 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms