RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 IGLV10-54A0A075B6I4 117 aa6.35□□□□□ -1.39
SMC1A-205ENST00000469129 GAGE12HA6NDE8 117 aa6.35□□□□□ -1.39
SMC1A-205ENST00000469129 GAGE10A6NGK3 116 aa6.35□□□□□ -1.39
SMC1A-205ENST00000469129 NHLRC4P0CG21 123 aaPredicted RBP6.35□□□□□ -1.39
SMC1A-205ENST00000469129 CCL18P55774 89 aa6.35□□□□□ -1.39
SMC1A-205ENST00000469129 CKS1BP61024 79 aa6.35□□□□□ -1.39
SMC1A-205ENST00000469129 FOXI1Q12951 378 aa6.35□□□□□ -1.39
SMC1A-205ENST00000469129 ESRGQ1W209 222 aa6.35□□□□□ -1.39
SMC1A-205ENST00000469129 ADAMTSL4-AS1Q5T5F5 129 aa6.35□□□□□ -1.39
SMC1A-205ENST00000469129 Q8N3U1 123 aa6.35□□□□□ -1.39
SMC1A-205ENST00000469129 UBE2WQ96B02 151 aa6.35□□□□□ -1.39
SMC1A-205ENST00000469129 SPCS1Q9Y6A9 102 aa6.35□□□□□ -1.39
SMC1A-205ENST00000469129 TENM3Q9P273 2699 aa6.34□□□□□ -1.39
SMC1A-205ENST00000469129 TSPAN13O95857 204 aa6.34□□□□□ -1.39
SMC1A-205ENST00000469129 CFC1BP0CG36 223 aa6.34□□□□□ -1.39
SMC1A-205ENST00000469129 CFC1P0CG37 223 aa6.34□□□□□ -1.39
SMC1A-205ENST00000469129 LINC00308Q8TCZ7 52 aa6.34□□□□□ -1.39
SMC1A-205ENST00000469129 DNAH10OSP0CZ25 163 aa6.33□□□□□ -1.4
SMC1A-205ENST00000469129 Q1RN00 199 aa6.33□□□□□ -1.4
SMC1A-205ENST00000469129 ENHOQ6UWT2 76 aa6.33□□□□□ -1.4
SMC1A-205ENST00000469129 MUC7Q8TAX7 377 aa6.33□□□□□ -1.4
SMC1A-205ENST00000469129 NAA38Q9BRA0 125 aaKnown RBP6.33□□□□□ -1.4
SMC1A-205ENST00000469129 C1orf43Q9BWL3 253 aa6.33□□□□□ -1.4
SMC1A-205ENST00000469129 ERG28Q9UKR5 140 aa6.33□□□□□ -1.4
SMC1A-205ENST00000469129 KLK5Q9Y337 293 aaPredicted RBP6.33□□□□□ -1.4
SMC1A-205ENST00000469129 TGP01266 2768 aa6.33□□□□□ -1.4
SMC1A-205ENST00000469129 LINC00158P58513 81 aa6.32□□□□□ -1.4
SMC1A-205ENST00000469129 NPC2P61916 151 aa6.32□□□□□ -1.4
SMC1A-205ENST00000469129 SPAG11BQ08648 103 aa6.32□□□□□ -1.4
SMC1A-205ENST00000469129 COX17Q14061 63 aa6.32□□□□□ -1.4
SMC1A-205ENST00000469129 DAND5Q8N907 189 aa6.32□□□□□ -1.4
SMC1A-205ENST00000469129 UPK3BQ9BT76 320 aa6.32□□□□□ -1.4
SMC1A-205ENST00000469129 DNAH9Q9NYC9 4486 aa6.31□□□□□ -1.4
SMC1A-205ENST00000469129 A0A0U1RRA0 63 aa6.31□□□□□ -1.4
SMC1A-205ENST00000469129 MIR7-3HGQ8N6C7 128 aa6.31□□□□□ -1.4
SMC1A-205ENST00000469129 RMI2Q96E14 147 aa6.31□□□□□ -1.4
SMC1A-205ENST00000469129 TRBV20-1A0A075B6N2 111 aa6.3□□□□□ -1.4
SMC1A-205ENST00000469129 LOC107984156A0A0G2JMH3 177 aa6.3□□□□□ -1.4
SMC1A-205ENST00000469129 PSMB2P49721 201 aa6.3□□□□□ -1.4
SMC1A-205ENST00000469129 KIAA0087Q14695 138 aa6.3□□□□□ -1.4
SMC1A-205ENST00000469129 ARL17AQ8IVW1 177 aa6.3□□□□□ -1.4
SMC1A-205ENST00000469129 NUPR2A6NF83 97 aa6.29□□□□□ -1.4
SMC1A-205ENST00000469129 F8WDY8 70 aa6.29□□□□□ -1.4
SMC1A-205ENST00000469129 COX6CP09669 75 aa6.29□□□□□ -1.4
SMC1A-205ENST00000469129 RPL13AP40429 203 aaKnown RBP6.29□□□□□ -1.4
SMC1A-205ENST00000469129 LINC00588Q9Y4M8 146 aa6.29□□□□□ -1.4
SMC1A-205ENST00000469129 GVQW2A0A096LPI5 108 aaPredicted RBP6.28□□□□□ -1.4
SMC1A-205ENST00000469129 TRAV13-2A0A0B4J235 113 aa6.28□□□□□ -1.4
SMC1A-205ENST00000469129 TRBV30A0A0K0K1B3 111 aa6.28□□□□□ -1.4
SMC1A-205ENST00000469129 ZNF561-AS1K7EIQ3 104 aa6.28□□□□□ -1.4
SMC1A-205ENST00000469129 EIF4EBP3O60516 100 aaPredicted RBP6.28□□□□□ -1.4
SMC1A-205ENST00000469129 PFN2P35080 140 aa6.28□□□□□ -1.4
SMC1A-205ENST00000469129 C2orf82Q6UX34 121 aa6.28□□□□□ -1.4
SMC1A-205ENST00000469129 SOSTDC1Q6X4U4 206 aa6.28□□□□□ -1.4
SMC1A-205ENST00000469129 SND1-IT1Q9HBX3 110 aa6.28□□□□□ -1.4
SMC1A-205ENST00000469129 IGKV2D-24A0A075B6R9 120 aa6.27□□□□□ -1.41
SMC1A-205ENST00000469129 H7C2G1 150 aa6.27□□□□□ -1.41
SMC1A-205ENST00000469129 SCGB1C2P0DMR2 95 aa6.27□□□□□ -1.41
SMC1A-205ENST00000469129 UBE2DNLQ8IWF7 75 aa6.27□□□□□ -1.41
SMC1A-205ENST00000469129 C2orf48Q96LS8 159 aa6.27□□□□□ -1.41
SMC1A-205ENST00000469129 HUWE1Q7Z6Z7 4374 aaKnown RBP6.27□□□□□ -1.41
SMC1A-205ENST00000469129 KRTAP26-1Q6PEX3 210 aa6.26□□□□□ -1.41
SMC1A-205ENST00000469129 NTN5Q8WTR8 489 aaPredicted RBP6.26□□□□□ -1.41
SMC1A-205ENST00000469129 NDUFC2O95298 119 aa6.25□□□□□ -1.41
SMC1A-205ENST00000469129 CAMK2N2Q96S95 79 aa6.25□□□□□ -1.41
SMC1A-205ENST00000469129 Q9HAA7 133 aa6.25□□□□□ -1.41
SMC1A-205ENST00000469129 F8W1H4 67 aa6.24□□□□□ -1.41
SMC1A-205ENST00000469129 TRIAP1O43715 76 aa6.24□□□□□ -1.41
SMC1A-205ENST00000469129 ATXN8Q156A1 80 aa6.24□□□□□ -1.41
SMC1A-205ENST00000469129 C15orf56Q8N910 161 aa6.24□□□□□ -1.41
SMC1A-205ENST00000469129 APLNQ9ULZ1 77 aa6.24□□□□□ -1.41
SMC1A-205ENST00000469129 H3BMG7 143 aa6.23□□□□□ -1.41
SMC1A-205ENST00000469129 TCL1BO95988 128 aa6.23□□□□□ -1.41
SMC1A-205ENST00000469129 UNQ6190/PRO20217Q6UXQ8 127 aa6.23□□□□□ -1.41
SMC1A-205ENST00000469129 HIGD2BQ4VC39 106 aa6.22□□□□□ -1.41
SMC1A-205ENST00000469129 TTC32Q5I0X7 151 aa6.22□□□□□ -1.41
SMC1A-205ENST00000469129 C6orf223Q8N319 242 aa6.22□□□□□ -1.41
SMC1A-205ENST00000469129 COL7A1Q02388 2944 aa6.21□□□□□ -1.42
SMC1A-205ENST00000469129 C10orf25Q5T742 122 aa6.21□□□□□ -1.42
SMC1A-205ENST00000469129 LINC00337Q8N6G1 96 aa6.21□□□□□ -1.42
SMC1A-205ENST00000469129 C6orf48Q9UBA6 75 aa6.21□□□□□ -1.42
SMC1A-205ENST00000469129 IGKV2-28A0A075B6P5 120 aa6.2□□□□□ -1.42
SMC1A-205ENST00000469129 IGKV2D-28P01615 120 aa6.2□□□□□ -1.42
SMC1A-205ENST00000469129 RPL28P46779 137 aaKnown RBP6.2□□□□□ -1.42
SMC1A-205ENST00000469129 SYCNQ0VAF6 134 aa6.2□□□□□ -1.42
SMC1A-205ENST00000469129 RNF151Q2KHN1 245 aa6.2□□□□□ -1.42
SMC1A-205ENST00000469129 C9orf116Q5BN46 136 aaPredicted RBP6.2□□□□□ -1.42
SMC1A-205ENST00000469129 LINC00526Q96FQ7 95 aa6.2□□□□□ -1.42
SMC1A-205ENST00000469129 NDUFC2-KCTD14E9PQ53 114 aa6.19□□□□□ -1.42
SMC1A-205ENST00000469129 K7ERU9 68 aa6.19□□□□□ -1.42
SMC1A-205ENST00000469129 M0QXV9 152 aa6.19□□□□□ -1.42
SMC1A-205ENST00000469129 LST1O00453 97 aa6.19□□□□□ -1.42
SMC1A-205ENST00000469129 LINC01620Q4KN68 170 aa6.19□□□□□ -1.42
SMC1A-205ENST00000469129 Q6ZRU5 148 aa6.19□□□□□ -1.42
SMC1A-205ENST00000469129 OR13C6PQ8NH95 151 aa6.19□□□□□ -1.42
SMC1A-205ENST00000469129 CARD19Q96LW7 228 aa6.19□□□□□ -1.42
SMC1A-205ENST00000469129 WWC2-AS2Q96NR7 200 aa6.19□□□□□ -1.42
SMC1A-205ENST00000469129 TRBV10-2A0A0K0K1G8 114 aa6.18□□□□□ -1.42
SMC1A-205ENST00000469129 USP17L23D6RBM5 183 aa6.18□□□□□ -1.42
SMC1A-205ENST00000469129 TMEM126AQ9H061 195 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms