RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 C2orf82Q6UX34 121 aa13.76□□□□□ -0.21
TMEM53-207ENST00000468117 TIMM17BO60830 172 aa13.76□□□□□ -0.21
TMEM53-207ENST00000468117 APOMO95445 188 aa13.76□□□□□ -0.21
TMEM53-207ENST00000468117 CIRBPQ14011 172 aaKnown RBP13.76□□□□□ -0.21
TMEM53-207ENST00000468117 NHP2Q9NX24 153 aaKnown RBP13.76□□□□□ -0.21
TMEM53-207ENST00000468117 Q6ZVH6 145 aa13.75□□□□□ -0.21
TMEM53-207ENST00000468117 A0A1B0GV90 55 aa13.74□□□□□ -0.21
TMEM53-207ENST00000468117 MUSTN1Q8IVN3 82 aa13.74□□□□□ -0.21
TMEM53-207ENST00000468117 SPANXDQ9BXN6 97 aa13.74□□□□□ -0.21
TMEM53-207ENST00000468117 SPANXCQ9NY87 97 aa13.74□□□□□ -0.21
TMEM53-207ENST00000468117 SMIM13P0DJ93 91 aa13.74□□□□□ -0.21
TMEM53-207ENST00000468117 NPC2P61916 151 aa13.74□□□□□ -0.21
TMEM53-207ENST00000468117 CFAP161Q6P656 301 aa13.74□□□□□ -0.21
TMEM53-207ENST00000468117 K7ERJ3 54 aa13.73□□□□□ -0.21
TMEM53-207ENST00000468117 CKS1BP61024 79 aa13.73□□□□□ -0.21
TMEM53-207ENST00000468117 LINC00526Q96FQ7 95 aa13.73□□□□□ -0.21
TMEM53-207ENST00000468117 SPAG11BQ08648 103 aa13.73□□□□□ -0.21
TMEM53-207ENST00000468117 TAX1BP3O14907 124 aa13.72□□□□□ -0.21
TMEM53-207ENST00000468117 SFTA2Q6UW10 78 aa13.71□□□□□ -0.21
TMEM53-207ENST00000468117 C6orf223Q8N319 242 aa13.71□□□□□ -0.21
TMEM53-207ENST00000468117 RAB37Q96AX2 223 aa13.71□□□□□ -0.22
TMEM53-207ENST00000468117 TMEM238LA0A1B0GVL6 79 aa13.7□□□□□ -0.22
TMEM53-207ENST00000468117 A6NJY4 79 aa13.7□□□□□ -0.22
TMEM53-207ENST00000468117 EIF4EBP3O60516 100 aaPredicted RBP13.7□□□□□ -0.22
TMEM53-207ENST00000468117 KRTAP1-5Q9BYS1 174 aa13.7□□□□□ -0.22
TMEM53-207ENST00000468117 A4D1N5 150 aa13.69□□□□□ -0.22
TMEM53-207ENST00000468117 CXCL5P42830 114 aa13.69□□□□□ -0.22
TMEM53-207ENST00000468117 PFN2P35080 140 aa13.68□□□□□ -0.22
TMEM53-207ENST00000468117 RPL24P83731 157 aaKnown RBP13.68□□□□□ -0.22
TMEM53-207ENST00000468117 HIGD2BQ4VC39 106 aa13.68□□□□□ -0.22
TMEM53-207ENST00000468117 C15orf56Q8N910 161 aa13.68□□□□□ -0.22
TMEM53-207ENST00000468117 ERG28Q9UKR5 140 aa13.68□□□□□ -0.22
TMEM53-207ENST00000468117 LINC00158P58513 81 aa13.67□□□□□ -0.22
TMEM53-207ENST00000468117 LINC00308Q8TCZ7 52 aa13.66□□□□□ -0.22
TMEM53-207ENST00000468117 A0A1B0GWB2 263 aa13.66□□□□□ -0.22
TMEM53-207ENST00000468117 C10orf25Q5T742 122 aa13.66□□□□□ -0.22
TMEM53-207ENST00000468117 UNQ6190/PRO20217Q6UXQ8 127 aa13.66□□□□□ -0.22
TMEM53-207ENST00000468117 MIR7-3HGQ8N6C7 128 aa13.66□□□□□ -0.22
TMEM53-207ENST00000468117 MUC7Q8TAX7 377 aa13.66□□□□□ -0.22
TMEM53-207ENST00000468117 IFITM1P13164 125 aa13.65□□□□□ -0.22
TMEM53-207ENST00000468117 COX11Q9Y6N1 276 aa13.65□□□□□ -0.22
TMEM53-207ENST00000468117 VPS13DQ5THJ4 4388 aa13.65□□□□□ -0.22
TMEM53-207ENST00000468117 ZNF561-AS1K7EIQ3 104 aa13.64□□□□□ -0.23
TMEM53-207ENST00000468117 CFC1BP0CG36 223 aa13.64□□□□□ -0.23
TMEM53-207ENST00000468117 CFC1P0CG37 223 aa13.64□□□□□ -0.23
TMEM53-207ENST00000468117 C9orf116Q5BN46 136 aaPredicted RBP13.64□□□□□ -0.23
TMEM53-207ENST00000468117 CASC10Q5T4H9 136 aa13.64□□□□□ -0.23
TMEM53-207ENST00000468117 SOSTDC1Q6X4U4 206 aa13.64□□□□□ -0.23
TMEM53-207ENST00000468117 RMI2Q96E14 147 aa13.64□□□□□ -0.23
TMEM53-207ENST00000468117 DNAH10Q8IVF4 4471 aa13.64□□□□□ -0.23
TMEM53-207ENST00000468117 NTN5Q8WTR8 489 aaPredicted RBP13.64□□□□□ -0.23
TMEM53-207ENST00000468117 NAA38Q9BRA0 125 aaKnown RBP13.64□□□□□ -0.23
TMEM53-207ENST00000468117 C9orf118A6NHY6 69 aa13.6□□□□□ -0.23
TMEM53-207ENST00000468117 H3BUT2 72 aa13.59□□□□□ -0.23
TMEM53-207ENST00000468117 WWC2-AS2Q96NR7 200 aa13.59□□□□□ -0.23
TMEM53-207ENST00000468117 CAMK2N2Q96S95 79 aa13.59□□□□□ -0.23
TMEM53-207ENST00000468117 GVQW2A0A096LPI5 108 aaPredicted RBP13.59□□□□□ -0.23
TMEM53-207ENST00000468117 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.59□□□□□ -0.23
TMEM53-207ENST00000468117 COPS9Q8WXC6 57 aa13.59□□□□□ -0.23
TMEM53-207ENST00000468117 COX17Q14061 63 aa13.58□□□□□ -0.24
TMEM53-207ENST00000468117 C6orf48Q9UBA6 75 aa13.58□□□□□ -0.24
TMEM53-207ENST00000468117 NBDYA0A0U1RRE5 68 aa13.57□□□□□ -0.24
TMEM53-207ENST00000468117 A0A0B4J2C4 111 aa13.57□□□□□ -0.24
TMEM53-207ENST00000468117 USP17L23D6RBM5 183 aa13.57□□□□□ -0.24
TMEM53-207ENST00000468117 PGPEP1Q9NXJ5 209 aa13.57□□□□□ -0.24
TMEM53-207ENST00000468117 PRO1854Q9UHT4 67 aa13.56□□□□□ -0.24
TMEM53-207ENST00000468117 LECT2O14960 151 aa13.56□□□□□ -0.24
TMEM53-207ENST00000468117 C2orf48Q96LS8 159 aa13.56□□□□□ -0.24
TMEM53-207ENST00000468117 TTC32Q5I0X7 151 aa13.55□□□□□ -0.24
TMEM53-207ENST00000468117 Q6ZRU5 148 aa13.55□□□□□ -0.24
TMEM53-207ENST00000468117 PPDPFQ9H3Y8 114 aa13.54□□□□□ -0.24
TMEM53-207ENST00000468117 KMT2AQ03164 3969 aa13.53□□□□□ -0.24
TMEM53-207ENST00000468117 TSPAN13O95857 204 aa13.53□□□□□ -0.24
TMEM53-207ENST00000468117 SND1-IT1Q9HBX3 110 aa13.53□□□□□ -0.24
TMEM53-207ENST00000468117 TRBV30A0A0K0K1B3 111 aa13.52□□□□□ -0.24
TMEM53-207ENST00000468117 PSCAO43653 123 aa13.52□□□□□ -0.25
TMEM53-207ENST00000468117 H7C2G1 150 aa13.51□□□□□ -0.25
TMEM53-207ENST00000468117 M0R2N4 97 aa13.51□□□□□ -0.25
TMEM53-207ENST00000468117 VAMP3Q15836 100 aa13.51□□□□□ -0.25
TMEM53-207ENST00000468117 A0A1W2PPM0 123 aa13.51□□□□□ -0.25
TMEM53-207ENST00000468117 SYCNQ0VAF6 134 aa13.51□□□□□ -0.25
TMEM53-207ENST00000468117 WFDC2Q14508 124 aa13.5□□□□□ -0.25
TMEM53-207ENST00000468117 SLPIP03973 132 aa13.49□□□□□ -0.25
TMEM53-207ENST00000468117 F8WDY8 70 aa13.48□□□□□ -0.25
TMEM53-207ENST00000468117 LOC107984156A0A0G2JMH3 177 aa13.47□□□□□ -0.25
TMEM53-207ENST00000468117 ARL17AQ8IVW1 177 aa13.47□□□□□ -0.25
TMEM53-207ENST00000468117 IGKV2-28A0A075B6P5 120 aa13.47□□□□□ -0.25
TMEM53-207ENST00000468117 IGKV2D-28P01615 120 aa13.47□□□□□ -0.25
TMEM53-207ENST00000468117 FABP2P12104 132 aa13.46□□□□□ -0.25
TMEM53-207ENST00000468117 RPL13AP40429 203 aaKnown RBP13.46□□□□□ -0.25
TMEM53-207ENST00000468117 Q1RN00 199 aa13.46□□□□□ -0.25
TMEM53-207ENST00000468117 CARD19Q96LW7 228 aa13.46□□□□□ -0.26
TMEM53-207ENST00000468117 LINC00337Q8N6G1 96 aa13.44□□□□□ -0.26
TMEM53-207ENST00000468117 LY6G6CO95867 125 aa13.44□□□□□ -0.26
TMEM53-207ENST00000468117 XAGE1AQ9HD64 81 aa13.44□□□□□ -0.26
TMEM53-207ENST00000468117 NDUFC2-KCTD14E9PQ53 114 aa13.43□□□□□ -0.26
TMEM53-207ENST00000468117 Q6ZRN7 208 aaPredicted RBP13.43□□□□□ -0.26
TMEM53-207ENST00000468117 PRR3P79522 188 aaKnown RBP13.42□□□□□ -0.26
TMEM53-207ENST00000468117 Q8NDZ9 215 aa13.42□□□□□ -0.26
TMEM53-207ENST00000468117 SPCS1Q9Y6A9 102 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms