RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 C9orf118A6NHY6 69 aa8.26□□□□□ -1.09
HDLBP-231ENST00000467435 CXCL5P42830 114 aa8.26□□□□□ -1.09
HDLBP-231ENST00000467435 SPAG11BQ08648 103 aa8.26□□□□□ -1.09
HDLBP-231ENST00000467435 C1orf43Q9BWL3 253 aa8.26□□□□□ -1.09
HDLBP-231ENST00000467435 IFITM1P13164 125 aa8.25□□□□□ -1.09
HDLBP-231ENST00000467435 CKS1BP61024 79 aa8.25□□□□□ -1.09
HDLBP-231ENST00000467435 KIAA0087Q14695 138 aa8.25□□□□□ -1.09
HDLBP-231ENST00000467435 KRTAP26-1Q6PEX3 210 aa8.25□□□□□ -1.09
HDLBP-231ENST00000467435 UBE2DNLQ8IWF7 75 aa8.25□□□□□ -1.09
HDLBP-231ENST00000467435 KLK5Q9Y337 293 aaPredicted RBP8.25□□□□□ -1.09
HDLBP-231ENST00000467435 IGKV2D-24A0A075B6R9 120 aa8.24□□□□□ -1.09
HDLBP-231ENST00000467435 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.24□□□□□ -1.09
HDLBP-231ENST00000467435 IBA57-AS1B1ANH7 110 aa8.24□□□□□ -1.09
HDLBP-231ENST00000467435 H3BUT2 72 aa8.24□□□□□ -1.09
HDLBP-231ENST00000467435 C2orf82Q6UX34 121 aa8.24□□□□□ -1.09
HDLBP-231ENST00000467435 NAA38Q9BRA0 125 aaKnown RBP8.24□□□□□ -1.09
HDLBP-231ENST00000467435 Q9HAA7 133 aa8.24□□□□□ -1.09
HDLBP-231ENST00000467435 ERG28Q9UKR5 140 aa8.24□□□□□ -1.09
HDLBP-231ENST00000467435 A0A0B4J2C4 111 aa8.23□□□□□ -1.09
HDLBP-231ENST00000467435 CFC1BP0CG36 223 aa8.23□□□□□ -1.09
HDLBP-231ENST00000467435 CFC1P0CG37 223 aa8.23□□□□□ -1.09
HDLBP-231ENST00000467435 LINC00158P58513 81 aa8.23□□□□□ -1.09
HDLBP-231ENST00000467435 LINC00308Q8TCZ7 52 aa8.23□□□□□ -1.09
HDLBP-231ENST00000467435 COPS9Q8WXC6 57 aa8.23□□□□□ -1.09
HDLBP-231ENST00000467435 VAMP3Q15836 100 aa8.22□□□□□ -1.09
HDLBP-231ENST00000467435 MIR7-3HGQ8N6C7 128 aa8.22□□□□□ -1.09
HDLBP-231ENST00000467435 EIF4EBP3O60516 100 aaPredicted RBP8.21□□□□□ -1.1
HDLBP-231ENST00000467435 PFN2P35080 140 aa8.21□□□□□ -1.1
HDLBP-231ENST00000467435 SOSTDC1Q6X4U4 206 aa8.21□□□□□ -1.1
HDLBP-231ENST00000467435 PGPEP1Q9NXJ5 209 aa8.21□□□□□ -1.1
HDLBP-231ENST00000467435 COL7A1Q02388 2944 aa8.21□□□□□ -1.1
HDLBP-231ENST00000467435 A0A1W2PPM0 123 aa8.2□□□□□ -1.1
HDLBP-231ENST00000467435 C6orf223Q8N319 242 aa8.2□□□□□ -1.1
HDLBP-231ENST00000467435 RMI2Q96E14 147 aa8.2□□□□□ -1.1
HDLBP-231ENST00000467435 LINC00526Q96FQ7 95 aa8.2□□□□□ -1.1
HDLBP-231ENST00000467435 PPDPFQ9H3Y8 114 aa8.2□□□□□ -1.1
HDLBP-231ENST00000467435 PRO1854Q9UHT4 67 aa8.2□□□□□ -1.1
HDLBP-231ENST00000467435 DYNC2H1Q8NCM8 4307 aaKnown RBP8.19□□□□□ -1.1
HDLBP-231ENST00000467435 TSPAN13O95857 204 aa8.19□□□□□ -1.1
HDLBP-231ENST00000467435 HIGD2BQ4VC39 106 aa8.19□□□□□ -1.1
HDLBP-231ENST00000467435 C15orf56Q8N910 161 aa8.19□□□□□ -1.1
HDLBP-231ENST00000467435 NTN5Q8WTR8 489 aaPredicted RBP8.19□□□□□ -1.1
HDLBP-231ENST00000467435 ZNF561-AS1K7EIQ3 104 aa8.18□□□□□ -1.1
HDLBP-231ENST00000467435 FABP2P12104 132 aa8.18□□□□□ -1.1
HDLBP-231ENST00000467435 PRKDCP78527 4128 aaKnown RBP8.17□□□□□ -1.1
HDLBP-231ENST00000467435 COX17Q14061 63 aa8.17□□□□□ -1.1
HDLBP-231ENST00000467435 C10orf25Q5T742 122 aa8.17□□□□□ -1.1
HDLBP-231ENST00000467435 UNQ6190/PRO20217Q6UXQ8 127 aa8.17□□□□□ -1.1
HDLBP-231ENST00000467435 GVQW2A0A096LPI5 108 aaPredicted RBP8.16□□□□□ -1.1
HDLBP-231ENST00000467435 Q1RN00 199 aa8.16□□□□□ -1.1
HDLBP-231ENST00000467435 C9orf116Q5BN46 136 aaPredicted RBP8.16□□□□□ -1.1
HDLBP-231ENST00000467435 CAMK2N2Q96S95 79 aa8.16□□□□□ -1.1
HDLBP-231ENST00000467435 SPCS1Q9Y6A9 102 aa8.16□□□□□ -1.1
HDLBP-231ENST00000467435 H7C2G1 150 aa8.15□□□□□ -1.1
HDLBP-231ENST00000467435 K7EP34 96 aa8.15□□□□□ -1.1
HDLBP-231ENST00000467435 RPL13AP40429 203 aaKnown RBP8.15□□□□□ -1.1
HDLBP-231ENST00000467435 KRTAP1-5Q9BYS1 174 aa8.15□□□□□ -1.1
HDLBP-231ENST00000467435 SND1-IT1Q9HBX3 110 aa8.15□□□□□ -1.1
HDLBP-231ENST00000467435 DNAH1Q9P2D7 4330 aa8.15□□□□□ -1.11
HDLBP-231ENST00000467435 UBE2V1Q13404 147 aa8.14□□□□□ -1.11
HDLBP-231ENST00000467435 CASC10Q5T4H9 136 aa8.14□□□□□ -1.11
HDLBP-231ENST00000467435 GTF2H5Q6ZYL4 71 aa8.14□□□□□ -1.11
HDLBP-231ENST00000467435 MUC7Q8TAX7 377 aa8.14□□□□□ -1.11
HDLBP-231ENST00000467435 C2orf48Q96LS8 159 aa8.14□□□□□ -1.11
HDLBP-231ENST00000467435 C6orf48Q9UBA6 75 aa8.14□□□□□ -1.11
HDLBP-231ENST00000467435 STAB2Q8WWQ8 2551 aa8.14□□□□□ -1.11
HDLBP-231ENST00000467435 TRBV30A0A0K0K1B3 111 aa8.13□□□□□ -1.11
HDLBP-231ENST00000467435 GAGE10A6NGK3 116 aa8.13□□□□□ -1.11
HDLBP-231ENST00000467435 F8WDY8 70 aa8.13□□□□□ -1.11
HDLBP-231ENST00000467435 LYRM7Q5U5X0 104 aa8.13□□□□□ -1.11
HDLBP-231ENST00000467435 LOC107984156A0A0G2JMH3 177 aa8.12□□□□□ -1.11
HDLBP-231ENST00000467435 USP17L23D6RBM5 183 aa8.12□□□□□ -1.11
HDLBP-231ENST00000467435 PSMB2P49721 201 aa8.12□□□□□ -1.11
HDLBP-231ENST00000467435 TTC32Q5I0X7 151 aa8.12□□□□□ -1.11
HDLBP-231ENST00000467435 Q6ZRU5 148 aa8.12□□□□□ -1.11
HDLBP-231ENST00000467435 ARL17AQ8IVW1 177 aa8.12□□□□□ -1.11
HDLBP-231ENST00000467435 FBN3Q75N90 2809 aa8.11□□□□□ -1.11
HDLBP-231ENST00000467435 MEGF8Q7Z7M0 2845 aa8.11□□□□□ -1.11
HDLBP-231ENST00000467435 SYCNQ0VAF6 134 aa8.1□□□□□ -1.11
HDLBP-231ENST00000467435 IGKV2-28A0A075B6P5 120 aa8.09□□□□□ -1.11
HDLBP-231ENST00000467435 TRAV13-2A0A0B4J235 113 aa8.09□□□□□ -1.11
HDLBP-231ENST00000467435 NBDYA0A0U1RRE5 68 aa8.09□□□□□ -1.11
HDLBP-231ENST00000467435 IGKV2D-28P01615 120 aa8.09□□□□□ -1.11
HDLBP-231ENST00000467435 LINC00337Q8N6G1 96 aa8.09□□□□□ -1.11
HDLBP-231ENST00000467435 CARD19Q96LW7 228 aa8.09□□□□□ -1.11
HDLBP-231ENST00000467435 LECT2O14960 151 aa8.08□□□□□ -1.12
HDLBP-231ENST00000467435 PSCAO43653 123 aa8.08□□□□□ -1.12
HDLBP-231ENST00000467435 TRIAP1O43715 76 aa8.08□□□□□ -1.12
HDLBP-231ENST00000467435 NDUFC2O95298 119 aa8.08□□□□□ -1.12
HDLBP-231ENST00000467435 SCGB1C2P0DMR2 95 aa8.08□□□□□ -1.12
HDLBP-231ENST00000467435 PLECQ15149 4684 aaKnown RBP8.06□□□□□ -1.12
HDLBP-231ENST00000467435 NDUFC2-KCTD14E9PQ53 114 aa8.06□□□□□ -1.12
HDLBP-231ENST00000467435 WWC2-AS2Q96NR7 200 aa8.06□□□□□ -1.12
HDLBP-231ENST00000467435 DNAH7Q8WXX0 4024 aa8.05□□□□□ -1.12
HDLBP-231ENST00000467435 TRBV20-1A0A075B6N2 111 aa8.05□□□□□ -1.12
HDLBP-231ENST00000467435 NCR3O14931 201 aa8.05□□□□□ -1.12
HDLBP-231ENST00000467435 TCL1BO95988 128 aa8.05□□□□□ -1.12
HDLBP-231ENST00000467435 COX6CP09669 75 aa8.05□□□□□ -1.12
HDLBP-231ENST00000467435 RNF151Q2KHN1 245 aa8.05□□□□□ -1.12
HDLBP-231ENST00000467435 XAGE1AQ9HD64 81 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms