RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 F8WDY8 70 aa6.33□□□□□ -1.4
PRPF3-202ENST00000467329 MEIG1Q5JSS6 88 aa6.33□□□□□ -1.4
PRPF3-202ENST00000467329 DYNC2H1Q8NCM8 4307 aaKnown RBP6.32□□□□□ -1.4
PRPF3-202ENST00000467329 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.32□□□□□ -1.4
PRPF3-202ENST00000467329 SPAG11BQ08648 103 aa6.32□□□□□ -1.4
PRPF3-202ENST00000467329 ADAMTSL4-AS1Q5T5F5 129 aa6.32□□□□□ -1.4
PRPF3-202ENST00000467329 MUC7Q8TAX7 377 aa6.32□□□□□ -1.4
PRPF3-202ENST00000467329 CKS1BP61024 79 aa6.32□□□□□ -1.4
PRPF3-202ENST00000467329 MUSTN1Q8IVN3 82 aa6.32□□□□□ -1.4
PRPF3-202ENST00000467329 NHP2Q9NX24 153 aaKnown RBP6.32□□□□□ -1.4
PRPF3-202ENST00000467329 COX11Q9Y6N1 276 aa6.32□□□□□ -1.4
PRPF3-202ENST00000467329 UBE2DNLQ8IWF7 75 aa6.31□□□□□ -1.4
PRPF3-202ENST00000467329 A0A0B4J2C4 111 aa6.31□□□□□ -1.4
PRPF3-202ENST00000467329 A0A1B0GV90 55 aa6.31□□□□□ -1.4
PRPF3-202ENST00000467329 C9orf118A6NHY6 69 aa6.31□□□□□ -1.4
PRPF3-202ENST00000467329 COX17Q14061 63 aa6.31□□□□□ -1.4
PRPF3-202ENST00000467329 GVQW2A0A096LPI5 108 aaPredicted RBP6.3□□□□□ -1.4
PRPF3-202ENST00000467329 LINC00308Q8TCZ7 52 aa6.3□□□□□ -1.4
PRPF3-202ENST00000467329 C2orf48Q96LS8 159 aa6.3□□□□□ -1.4
PRPF3-202ENST00000467329 ERG28Q9UKR5 140 aa6.3□□□□□ -1.4
PRPF3-202ENST00000467329 IGKV2D-24A0A075B6R9 120 aa6.3□□□□□ -1.4
PRPF3-202ENST00000467329 A4D1N5 150 aa6.3□□□□□ -1.4
PRPF3-202ENST00000467329 NTN5Q8WTR8 489 aaPredicted RBP6.3□□□□□ -1.4
PRPF3-202ENST00000467329 K7ERJ3 54 aa6.28□□□□□ -1.4
PRPF3-202ENST00000467329 CFC1BP0CG36 223 aa6.28□□□□□ -1.4
PRPF3-202ENST00000467329 CFC1P0CG37 223 aa6.28□□□□□ -1.4
PRPF3-202ENST00000467329 TTC32Q5I0X7 151 aa6.28□□□□□ -1.4
PRPF3-202ENST00000467329 C15orf56Q8N910 161 aa6.28□□□□□ -1.4
PRPF3-202ENST00000467329 LOC107984156A0A0G2JMH3 177 aa6.28□□□□□ -1.4
PRPF3-202ENST00000467329 LINC00158P58513 81 aa6.28□□□□□ -1.4
PRPF3-202ENST00000467329 ARL17AQ8IVW1 177 aa6.28□□□□□ -1.4
PRPF3-202ENST00000467329 TRBV30A0A0K0K1B3 111 aa6.27□□□□□ -1.41
PRPF3-202ENST00000467329 C2orf82Q6UX34 121 aa6.27□□□□□ -1.41
PRPF3-202ENST00000467329 MIR7-3HGQ8N6C7 128 aa6.27□□□□□ -1.41
PRPF3-202ENST00000467329 Q9HAA7 133 aa6.27□□□□□ -1.41
PRPF3-202ENST00000467329 PRO1854Q9UHT4 67 aa6.27□□□□□ -1.41
PRPF3-202ENST00000467329 STAB2Q8WWQ8 2551 aa6.27□□□□□ -1.41
PRPF3-202ENST00000467329 ZNF561-AS1K7EIQ3 104 aa6.27□□□□□ -1.41
PRPF3-202ENST00000467329 SOSTDC1Q6X4U4 206 aa6.26□□□□□ -1.41
PRPF3-202ENST00000467329 DAND5Q8N907 189 aa6.26□□□□□ -1.41
PRPF3-202ENST00000467329 RAB37Q96AX2 223 aa6.26□□□□□ -1.41
PRPF3-202ENST00000467329 A0A0U1RRA0 63 aa6.25□□□□□ -1.41
PRPF3-202ENST00000467329 A0A1W2PPM0 123 aa6.25□□□□□ -1.41
PRPF3-202ENST00000467329 H3BUT2 72 aa6.25□□□□□ -1.41
PRPF3-202ENST00000467329 EIF4EBP3O60516 100 aaPredicted RBP6.25□□□□□ -1.41
PRPF3-202ENST00000467329 PFN2P35080 140 aa6.25□□□□□ -1.41
PRPF3-202ENST00000467329 RNF151Q2KHN1 245 aa6.25□□□□□ -1.41
PRPF3-202ENST00000467329 UNQ6190/PRO20217Q6UXQ8 127 aa6.25□□□□□ -1.41
PRPF3-202ENST00000467329 C6orf223Q8N319 242 aa6.25□□□□□ -1.41
PRPF3-202ENST00000467329 PRKDCP78527 4128 aaKnown RBP6.25□□□□□ -1.41
PRPF3-202ENST00000467329 MEGF8Q7Z7M0 2845 aa6.24□□□□□ -1.41
PRPF3-202ENST00000467329 WWC2-AS2Q96NR7 200 aa6.24□□□□□ -1.41
PRPF3-202ENST00000467329 CAMK2N2Q96S95 79 aa6.24□□□□□ -1.41
PRPF3-202ENST00000467329 PGPEP1Q9NXJ5 209 aa6.24□□□□□ -1.41
PRPF3-202ENST00000467329 COL7A1Q02388 2944 aa6.24□□□□□ -1.41
PRPF3-202ENST00000467329 NBDYA0A0U1RRE5 68 aa6.24□□□□□ -1.41
PRPF3-202ENST00000467329 TSPAN13O95857 204 aa6.24□□□□□ -1.41
PRPF3-202ENST00000467329 NPC2P61916 151 aa6.24□□□□□ -1.41
PRPF3-202ENST00000467329 C10orf25Q5T742 122 aa6.24□□□□□ -1.41
PRPF3-202ENST00000467329 LYRM7Q5U5X0 104 aa6.24□□□□□ -1.41
PRPF3-202ENST00000467329 KRTAP1-5Q9BYS1 174 aa6.24□□□□□ -1.41
PRPF3-202ENST00000467329 C6orf48Q9UBA6 75 aa6.24□□□□□ -1.41
PRPF3-202ENST00000467329 FABP2P12104 132 aa6.23□□□□□ -1.41
PRPF3-202ENST00000467329 HIGD2BQ4VC39 106 aa6.23□□□□□ -1.41
PRPF3-202ENST00000467329 USP17L23D6RBM5 183 aa6.23□□□□□ -1.41
PRPF3-202ENST00000467329 NDUFC2O95298 119 aa6.23□□□□□ -1.41
PRPF3-202ENST00000467329 VAMP3Q15836 100 aa6.23□□□□□ -1.41
PRPF3-202ENST00000467329 SND1-IT1Q9HBX3 110 aa6.23□□□□□ -1.41
PRPF3-202ENST00000467329 TRAV13-2A0A0B4J235 113 aa6.22□□□□□ -1.41
PRPF3-202ENST00000467329 SYCNQ0VAF6 134 aa6.22□□□□□ -1.41
PRPF3-202ENST00000467329 K7EP34 96 aa6.21□□□□□ -1.41
PRPF3-202ENST00000467329 Q6ZRU5 148 aa6.21□□□□□ -1.41
PRPF3-202ENST00000467329 GTF2H5Q6ZYL4 71 aa6.21□□□□□ -1.41
PRPF3-202ENST00000467329 LINC00526Q96FQ7 95 aa6.21□□□□□ -1.41
PRPF3-202ENST00000467329 C14orf177Q52M58 125 aa6.21□□□□□ -1.42
PRPF3-202ENST00000467329 DNAH1Q9P2D7 4330 aa6.21□□□□□ -1.42
PRPF3-202ENST00000467329 TLX1NBP0CAT3 122 aa6.2□□□□□ -1.42
PRPF3-202ENST00000467329 RPL13AP40429 203 aaKnown RBP6.2□□□□□ -1.42
PRPF3-202ENST00000467329 UBE2V1Q13404 147 aa6.2□□□□□ -1.42
PRPF3-202ENST00000467329 C9orf116Q5BN46 136 aaPredicted RBP6.2□□□□□ -1.42
PRPF3-202ENST00000467329 CASC10Q5T4H9 136 aa6.2□□□□□ -1.42
PRPF3-202ENST00000467329 CARD19Q96LW7 228 aa6.2□□□□□ -1.42
PRPF3-202ENST00000467329 NAA38Q9BRA0 125 aaKnown RBP6.2□□□□□ -1.42
PRPF3-202ENST00000467329 SPCS1Q9Y6A9 102 aa6.2□□□□□ -1.42
PRPF3-202ENST00000467329 DNAH7Q8WXX0 4024 aa6.2□□□□□ -1.42
PRPF3-202ENST00000467329 NDUFC2-KCTD14E9PQ53 114 aa6.19□□□□□ -1.42
PRPF3-202ENST00000467329 C3orf84H3BNL1 204 aa6.19□□□□□ -1.42
PRPF3-202ENST00000467329 IGKV2-28A0A075B6P5 120 aa6.19□□□□□ -1.42
PRPF3-202ENST00000467329 GAGE10A6NGK3 116 aa6.19□□□□□ -1.42
PRPF3-202ENST00000467329 IGKV2D-28P01615 120 aa6.19□□□□□ -1.42
PRPF3-202ENST00000467329 Q1RN00 199 aa6.18□□□□□ -1.42
PRPF3-202ENST00000467329 TRBV20-1A0A075B6N2 111 aa6.18□□□□□ -1.42
PRPF3-202ENST00000467329 PSCAO43653 123 aa6.18□□□□□ -1.42
PRPF3-202ENST00000467329 TRBV10-2A0A0K0K1G8 114 aa6.17□□□□□ -1.42
PRPF3-202ENST00000467329 CNBPP62633 177 aaKnown RBP6.17□□□□□ -1.42
PRPF3-202ENST00000467329 Q6ZR54 194 aa6.17□□□□□ -1.42
PRPF3-202ENST00000467329 Q6ZRN7 208 aaPredicted RBP6.17□□□□□ -1.42
PRPF3-202ENST00000467329 VPS13DQ5THJ4 4388 aa6.17□□□□□ -1.42
PRPF3-202ENST00000467329 PSMB2P49721 201 aa6.17□□□□□ -1.42
PRPF3-202ENST00000467329 LINC00337Q8N6G1 96 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms