RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 ACBD7Q8N6N7 88 aa0.06□□□□□ -2.4
VPS13A-209ENST00000467124 TRGV9Q99603 122 aa0.06□□□□□ -2.4
VPS13A-209ENST00000467124 TULP4Q9NRJ4 1543 aa0.06□□□□□ -2.4
VPS13A-209ENST00000467124 PIEZO2Q9H5I5 2752 aa0.06□□□□□ -2.4
VPS13A-209ENST00000467124 ZFHX3Q15911 3703 aa0.05□□□□□ -2.4
VPS13A-209ENST00000467124 PLEKHH2Q8IVE3 1493 aa0.05□□□□□ -2.4
VPS13A-209ENST00000467124 TRBV25-1A0A075B6N4 114 aa0.05□□□□□ -2.4
VPS13A-209ENST00000467124 A0A1B0GU69 56 aa0.05□□□□□ -2.4
VPS13A-209ENST00000467124 SYS1-DBNDD2H3BUS1 97 aa0.05□□□□□ -2.4
VPS13A-209ENST00000467124 K7EQZ3 153 aa0.05□□□□□ -2.4
VPS13A-209ENST00000467124 M0R143 59 aa0.05□□□□□ -2.4
VPS13A-209ENST00000467124 NDUFC1O43677 76 aa0.05□□□□□ -2.4
VPS13A-209ENST00000467124 KLK9Q2XQG4 91 aa0.05□□□□□ -2.4
VPS13A-209ENST00000467124 LINC00846Q9NV44 126 aa0.05□□□□□ -2.4
VPS13A-209ENST00000467124 CRIPTQ9P021 101 aa0.05□□□□□ -2.4
VPS13A-209ENST00000467124 PDCD11Q14690 1871 aaKnown RBP0.05□□□□□ -2.4
VPS13A-209ENST00000467124 URB1O60287 2271 aaKnown RBP0.04□□□□□ -2.4
VPS13A-209ENST00000467124 NUP188Q5SRE5 1749 aa0.04□□□□□ -2.4
VPS13A-209ENST00000467124 GAPVD1Q14C86 1478 aa0.04□□□□□ -2.4
VPS13A-209ENST00000467124 H7BZZ5 65 aa0.04□□□□□ -2.4
VPS13A-209ENST00000467124 ATOX1O00244 68 aa0.04□□□□□ -2.4
VPS13A-209ENST00000467124 UQCRHP07919 91 aa0.04□□□□□ -2.4
VPS13A-209ENST00000467124 C6orf201Q7Z4U5 140 aa0.04□□□□□ -2.4
VPS13A-209ENST00000467124 TSC2P49815 1807 aa0.03□□□□□ -2.4
VPS13A-209ENST00000467124 MRC2Q9UBG0 1479 aa0.03□□□□□ -2.4
VPS13A-209ENST00000467124 ANKRD17O75179 2603 aaKnown RBP0.03□□□□□ -2.4
VPS13A-209ENST00000467124 GNGT1P63211 74 aa0.03□□□□□ -2.4
VPS13A-209ENST00000467124 SERP2Q8N6R1 65 aa0.03□□□□□ -2.4
VPS13A-209ENST00000467124 DPY30Q9C005 99 aa0.03□□□□□ -2.4
VPS13A-209ENST00000467124 PRDM15P57071 1507 aaPredicted RBP0.03□□□□□ -2.41
VPS13A-209ENST00000467124 H3BQF6 201 aa0.02□□□□□ -2.41
VPS13A-209ENST00000467124 PRM1P04553 51 aa0.02□□□□□ -2.41
VPS13A-209ENST00000467124 LINC00032P0C843 101 aa0.02□□□□□ -2.41
VPS13A-209ENST00000467124 DNAJC13O75165 2243 aa0.01□□□□□ -2.41
VPS13A-209ENST00000467124 CSPG4Q6UVK1 2322 aa0.01□□□□□ -2.41
VPS13A-209ENST00000467124 VWFP04275 2813 aa0.01□□□□□ -2.41
VPS13A-209ENST00000467124 SETBP1Q9Y6X0 1596 aa0.01□□□□□ -2.41
VPS13A-209ENST00000467124 KNDC1Q76NI1 1749 aa0.01□□□□□ -2.41
VPS13A-209ENST00000467124 XRN1Q8IZH2 1706 aaKnown RBP0.01□□□□□ -2.41
VPS13A-209ENST00000467124 H0Y9P7 68 aa0□□□□□ -2.41
VPS13A-209ENST00000467124 NRXN1Q9ULB1 1477 aa-0.01□□□□□ -2.41
VPS13A-209ENST00000467124 ARMS2P0C7Q2 107 aa-0.01□□□□□ -2.41
VPS13A-209ENST00000467124 DEFB105AQ8NG35 78 aa-0.01□□□□□ -2.41
VPS13A-209ENST00000467124 APLNQ9ULZ1 77 aa-0.01□□□□□ -2.41
VPS13A-209ENST00000467124 FLNCQ14315 2725 aa-0.01□□□□□ -2.41
VPS13A-209ENST00000467124 HMCN2Q8NDA2 5059 aa-0.02□□□□□ -2.41
VPS13A-209ENST00000467124 ABCC10Q5T3U5 1492 aa-0.02□□□□□ -2.41
VPS13A-209ENST00000467124 FYCO1Q9BQS8 1478 aa-0.02□□□□□ -2.41
VPS13A-209ENST00000467124 UQCRHLA0A096LP55 91 aa-0.02□□□□□ -2.41
VPS13A-209ENST00000467124 LOC730098B7Z3J9 87 aa-0.02□□□□□ -2.41
VPS13A-209ENST00000467124 USMG5Q96IX5 58 aa-0.02□□□□□ -2.41
VPS13A-209ENST00000467124 MARF1Q9Y4F3 1742 aaKnown RBP-0.02□□□□□ -2.41
VPS13A-209ENST00000467124 TENM4Q6N022 2769 aa-0.02□□□□□ -2.41
VPS13A-209ENST00000467124 TEX14Q8IWB6 1497 aa-0.03□□□□□ -2.41
VPS13A-209ENST00000467124 SNHG12Q9BXW3 62 aa-0.03□□□□□ -2.41
VPS13A-209ENST00000467124 PSENENQ9NZ42 101 aa-0.03□□□□□ -2.41
VPS13A-209ENST00000467124 KIAA0556O60303 1618 aa-0.04□□□□□ -2.42
VPS13A-209ENST00000467124 CPSF4LA6NMK7 179 aaKnown RBP-0.04□□□□□ -2.42
VPS13A-209ENST00000467124 COX8AP10176 69 aa-0.04□□□□□ -2.42
VPS13A-209ENST00000467124 PKD1L1Q8TDX9 2849 aa-0.04□□□□□ -2.42
VPS13A-209ENST00000467124 SPTA1P02549 2419 aa-0.04□□□□□ -2.42
VPS13A-209ENST00000467124 ATRQ13535 2644 aa-0.04□□□□□ -2.42
VPS13A-209ENST00000467124 MAP1BP46821 2468 aaKnown RBP-0.05□□□□□ -2.42
VPS13A-209ENST00000467124 F8WEM9 126 aa-0.05□□□□□ -2.42
VPS13A-209ENST00000467124 ETDBQ3ZM63 59 aa-0.05□□□□□ -2.42
VPS13A-209ENST00000467124 PAPPA2Q9BXP8 1791 aa-0.05□□□□□ -2.42
VPS13A-209ENST00000467124 FMN2Q9NZ56 1722 aa-0.05□□□□□ -2.42
VPS13A-209ENST00000467124 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.06□□□□□ -2.42
VPS13A-209ENST00000467124 A0A0G2JMZ2 1700 aa-0.06□□□□□ -2.42
VPS13A-209ENST00000467124 LEPROTL1O95214 131 aa-0.06□□□□□ -2.42
VPS13A-209ENST00000467124 S100A8P05109 93 aa-0.06□□□□□ -2.42
VPS13A-209ENST00000467124 PKIAP61925 76 aa-0.06□□□□□ -2.42
VPS13A-209ENST00000467124 RAPGEF2Q9Y4G8 1499 aa-0.06□□□□□ -2.42
VPS13A-209ENST00000467124 MYCBP2O75592 4640 aa-0.06□□□□□ -2.42
VPS13A-209ENST00000467124 SPINK4O60575 86 aa-0.07□□□□□ -2.42
VPS13A-209ENST00000467124 ZNF720Q7Z2F6 126 aa-0.07□□□□□ -2.42
VPS13A-209ENST00000467124 TRBV7-7A0A0K0K1E9 115 aa-0.08□□□□□ -2.42
VPS13A-209ENST00000467124 D6R8Y8 96 aa-0.08□□□□□ -2.42
VPS13A-209ENST00000467124 MUSTN1Q8IVN3 82 aa-0.08□□□□□ -2.42
VPS13A-209ENST00000467124 SLIT1O75093 1534 aa-0.08□□□□□ -2.42
VPS13A-209ENST00000467124 HIGD1BQ9P298 99 aa-0.09□□□□□ -2.42
VPS13A-209ENST00000467124 HSPG2P98160 4391 aa-0.09□□□□□ -2.42
VPS13A-209ENST00000467124 TNXBP22105 4242 aa-0.09□□□□□ -2.42
VPS13A-209ENST00000467124 NSD1Q96L73 2696 aaPredicted RBP-0.1□□□□□ -2.42
VPS13A-209ENST00000467124 I3L3M4 83 aa-0.1□□□□□ -2.43
VPS13A-209ENST00000467124 SPRR2DP22532 72 aa-0.1□□□□□ -2.43
VPS13A-209ENST00000467124 TARBP1Q13395 1621 aaKnown RBP-0.1□□□□□ -2.43
VPS13A-209ENST00000467124 DSTQ03001 7570 aaKnown RBP-0.11□□□□□ -2.43
VPS13A-209ENST00000467124 EDC4Q6P2E9 1401 aaKnown RBP-0.12□□□□□ -2.43
VPS13A-209ENST00000467124 VPS8Q8N3P4 1428 aa-0.12□□□□□ -2.43
VPS13A-209ENST00000467124 FAT2Q9NYQ8 4349 aa-0.12□□□□□ -2.43
VPS13A-209ENST00000467124 WNK1Q9H4A3 2382 aa-0.12□□□□□ -2.43
VPS13A-209ENST00000467124 LPAP08519 4548 aa-0.12□□□□□ -2.43
VPS13A-209ENST00000467124 CHD8Q9HCK8 2581 aa-0.12□□□□□ -2.43
VPS13A-209ENST00000467124 DEFB112Q30KQ8 113 aa-0.12□□□□□ -2.43
VPS13A-209ENST00000467124 C20orf78Q9BR46 151 aa-0.12□□□□□ -2.43
VPS13A-209ENST00000467124 MON2Q7Z3U7 1717 aa-0.13□□□□□ -2.43
VPS13A-209ENST00000467124 ANKRD36A6QL64 1941 aa-0.13□□□□□ -2.43
VPS13A-209ENST00000467124 IGLC2P0DOY2 106 aa-0.13□□□□□ -2.43
VPS13A-209ENST00000467124 IGLC3P0DOY3 106 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms