RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 LINC01547P58512 204 aaPredicted RBP6.23□□□□□ -1.41
HPS4-209ENST00000466781 PCOTHQ58A44 107 aa6.23□□□□□ -1.41
HPS4-209ENST00000466781 LINC00242Q5T6M2 205 aa6.23□□□□□ -1.41
HPS4-209ENST00000466781 PTPRBP23467 1997 aa6.23□□□□□ -1.41
HPS4-209ENST00000466781 CRIP2P52943 208 aaPredicted RBP6.23□□□□□ -1.41
HPS4-209ENST00000466781 COX6A2Q02221 97 aa6.23□□□□□ -1.41
HPS4-209ENST00000466781 IGLV4-60A0A075B6I1 120 aa6.22□□□□□ -1.41
HPS4-209ENST00000466781 COL6A3P12111 3177 aa6.22□□□□□ -1.41
HPS4-209ENST00000466781 TRAV7A0A075B6U4 112 aa6.22□□□□□ -1.41
HPS4-209ENST00000466781 SMIM1B2RUZ4 78 aa6.22□□□□□ -1.41
HPS4-209ENST00000466781 CHD9Q3L8U1 2897 aa6.22□□□□□ -1.41
HPS4-209ENST00000466781 TANC2Q9HCD6 1990 aa6.22□□□□□ -1.41
HPS4-209ENST00000466781 H0Y9P7 68 aa6.22□□□□□ -1.41
HPS4-209ENST00000466781 SBSPONQ8IVN8 264 aa6.22□□□□□ -1.41
HPS4-209ENST00000466781 LYPD5Q6UWN5 251 aa6.21□□□□□ -1.41
HPS4-209ENST00000466781 A0A087WYN8 130 aa6.21□□□□□ -1.42
HPS4-209ENST00000466781 IGIPA6NJ69 53 aa6.21□□□□□ -1.42
HPS4-209ENST00000466781 Q6Q795 121 aa6.21□□□□□ -1.42
HPS4-209ENST00000466781 SPTAN1Q13813 2472 aaKnown RBP6.2□□□□□ -1.42
HPS4-209ENST00000466781 PCNX1Q96RV3 2341 aa6.2□□□□□ -1.42
HPS4-209ENST00000466781 EXPH5Q8NEV8 1989 aa6.2□□□□□ -1.42
HPS4-209ENST00000466781 A0A087WSZ3 146 aa6.2□□□□□ -1.42
HPS4-209ENST00000466781 PRR3P79522 188 aaKnown RBP6.2□□□□□ -1.42
HPS4-209ENST00000466781 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.2□□□□□ -1.423e-7■■■■□ 19.5
HPS4-209ENST00000466781 PLCE1Q9P212 2302 aa6.2□□□□□ -1.42
HPS4-209ENST00000466781 GAS8-AS1O95177 125 aa6.2□□□□□ -1.42
HPS4-209ENST00000466781 DOPEY1Q5JWR5 2465 aa6.2□□□□□ -1.42
HPS4-209ENST00000466781 HCG22E2RYF7 251 aa6.19□□□□□ -1.42
HPS4-209ENST00000466781 LINC00694P0DN24 101 aa6.19□□□□□ -1.42
HPS4-209ENST00000466781 C7orf65Q6ZTY9 151 aa6.19□□□□□ -1.42
HPS4-209ENST00000466781 C2orf91Q6ZV80 131 aa6.19□□□□□ -1.42
HPS4-209ENST00000466781 LINC00575Q6W349 94 aa6.19□□□□□ -1.42
HPS4-209ENST00000466781 DEFB116Q30KQ4 102 aa6.18□□□□□ -1.42
HPS4-209ENST00000466781 C1orf195Q5TG92 126 aa6.18□□□□□ -1.42
HPS4-209ENST00000466781 SMIM26A0A096LP01 95 aa6.18□□□□□ -1.42
HPS4-209ENST00000466781 ZNF580Q9UK33 172 aa6.18□□□□□ -1.42
HPS4-209ENST00000466781 FHL3Q13643 280 aa6.18□□□□□ -1.42
HPS4-209ENST00000466781 CNFNQ9BYD5 112 aa6.18□□□□□ -1.42
HPS4-209ENST00000466781 CACNA1HO95180 2353 aa6.18□□□□□ -1.42
HPS4-209ENST00000466781 TRBV7-7A0A0K0K1E9 115 aa6.18□□□□□ -1.42
HPS4-209ENST00000466781 CCDC179H3BU77 68 aa6.18□□□□□ -1.42
HPS4-209ENST00000466781 MDFIQ99750 246 aa6.18□□□□□ -1.42
HPS4-209ENST00000466781 FAM229AH3BQW9 127 aa6.17□□□□□ -1.42
HPS4-209ENST00000466781 PRLHP81277 87 aa6.17□□□□□ -1.42
HPS4-209ENST00000466781 DSCAML1Q8TD84 2053 aa6.17□□□□□ -1.42
HPS4-209ENST00000466781 PTPRQQ9UMZ3 2332 aa6.17□□□□□ -1.42
HPS4-209ENST00000466781 Q8N2B8 174 aa6.17□□□□□ -1.42
HPS4-209ENST00000466781 XGP55808 180 aa6.17□□□□□ -1.42
HPS4-209ENST00000466781 HIVEP2P31629 2446 aa6.17□□□□□ -1.42
HPS4-209ENST00000466781 LINC01561Q8N1V8 128 aa6.17□□□□□ -1.42
HPS4-209ENST00000466781 CSDC2Q9Y534 153 aaKnown RBP6.17□□□□□ -1.42
HPS4-209ENST00000466781 TRANK1O15050 2925 aa6.17□□□□□ -1.42
HPS4-209ENST00000466781 IGKV2D-30A0A075B6S6 120 aa6.17□□□□□ -1.42
HPS4-209ENST00000466781 IGKV2-30P06310 120 aa6.17□□□□□ -1.42
HPS4-209ENST00000466781 BEAN1Q3B7T3 259 aa6.16□□□□□ -1.42
HPS4-209ENST00000466781 Q6ZRU5 148 aa6.16□□□□□ -1.42
HPS4-209ENST00000466781 A0A1B0GUV1 79 aa6.16□□□□□ -1.42
HPS4-209ENST00000466781 SMCR5Q8TEV8 140 aa6.16□□□□□ -1.42
HPS4-209ENST00000466781 SOSTDC1Q6X4U4 206 aa6.16□□□□□ -1.42
HPS4-209ENST00000466781 C22orf24Q9Y442 160 aa6.15□□□□□ -1.42
HPS4-209ENST00000466781 SPACA4Q8TDM5 124 aa6.15□□□□□ -1.43
HPS4-209ENST00000466781 TRIOO75962 3097 aa6.15□□□□□ -1.43
HPS4-209ENST00000466781 OTOGLQ3ZCN5 2332 aa6.15□□□□□ -1.43
HPS4-209ENST00000466781 CRYGAP11844 174 aa6.14□□□□□ -1.43
HPS4-209ENST00000466781 PMAIP1Q13794 54 aa6.14□□□□□ -1.43
HPS4-209ENST00000466781 TNCP24821 2201 aa6.14□□□□□ -1.43
HPS4-209ENST00000466781 hDV103S1A0JD37 113 aa6.13□□□□□ -1.43
HPS4-209ENST00000466781 KRTAP24-1Q3LI83 254 aa6.13□□□□□ -1.43
HPS4-209ENST00000466781 AMELXQ99217 191 aa6.13□□□□□ -1.43
HPS4-209ENST00000466781 SPENQ96T58 3664 aaKnown RBP6.13□□□□□ -1.43
HPS4-209ENST00000466781 Q8N3U1 123 aa6.13□□□□□ -1.43
HPS4-209ENST00000466781 CFAP54Q96N23 3096 aa6.13□□□□□ -1.43
HPS4-209ENST00000466781 A0A087WVE0 104 aa6.13□□□□□ -1.43
HPS4-209ENST00000466781 Q6ZSN1 163 aa6.13□□□□□ -1.43
HPS4-209ENST00000466781 TSPEAR-AS2P59090 65 aa6.12□□□□□ -1.43
HPS4-209ENST00000466781 YPEL4Q96NS1 127 aa6.12□□□□□ -1.43
HPS4-209ENST00000466781 MOBPQ13875 183 aa6.12□□□□□ -1.43
HPS4-209ENST00000466781 WDFY4Q6ZS81 3184 aa6.11□□□□□ -1.43
HPS4-209ENST00000466781 ADAMTSL4-AS1Q5T5F5 129 aa6.11□□□□□ -1.43
HPS4-209ENST00000466781 NBASA2RRP1 2371 aa6.11□□□□□ -1.43
HPS4-209ENST00000466781 PSPHP1O15172 72 aa6.11□□□□□ -1.43
HPS4-209ENST00000466781 PLA2G1BP04054 148 aaKnown RBP6.11□□□□□ -1.43
HPS4-209ENST00000466781 C1orf64Q8NEQ6 169 aa6.11□□□□□ -1.43
HPS4-209ENST00000466781 WNK1Q9H4A3 2382 aa6.1□□□□□ -1.43
HPS4-209ENST00000466781 TTC28Q96AY4 2481 aa6.1□□□□□ -1.43
HPS4-209ENST00000466781 NOTCH2Q04721 2471 aa6.1□□□□□ -1.43
HPS4-209ENST00000466781 LAMA1P25391 3075 aa6.09□□□□□ -1.43
HPS4-209ENST00000466781 PCSK5Q92824 1860 aa6.09□□□□□ -1.43
HPS4-209ENST00000466781 C16orf90A8MZG2 172 aa6.09□□□□□ -1.43
HPS4-209ENST00000466781 J3QL48 77 aa6.09□□□□□ -1.43
HPS4-209ENST00000466781 ZFHX3Q15911 3703 aa6.09□□□□□ -1.44
HPS4-209ENST00000466781 A8MTW9 85 aa6.09□□□□□ -1.44
HPS4-209ENST00000466781 A0A1B0GU69 56 aa6.08□□□□□ -1.44
HPS4-209ENST00000466781 RTL8CO15255 209 aa6.08□□□□□ -1.44
HPS4-209ENST00000466781 TYMSOSQ8TAI1 123 aa6.08□□□□□ -1.44
HPS4-209ENST00000466781 ARHGAP32A7KAX9 2087 aa6.08□□□□□ -1.44
HPS4-209ENST00000466781 KIAA0087Q14695 138 aa6.08□□□□□ -1.44
HPS4-209ENST00000466781 FRYLO94915 3013 aa6.08□□□□□ -1.44
HPS4-209ENST00000466781 ASPMQ8IZT6 3477 aa6.07□□□□□ -1.44
HPS4-209ENST00000466781 ACYP2P14621 99 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms