RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 NPSP0C0P6 89 aa12.55□□□□□ -0.4
CSPG5-204ENST00000465441 IGLV1-50A0A075B6I6 118 aa12.54□□□□□ -0.4
CSPG5-204ENST00000465441 CKS1BP61024 79 aa12.54□□□□□ -0.4
CSPG5-204ENST00000465441 RHEBQ15382 184 aa12.54□□□□□ -0.4
CSPG5-204ENST00000465441 Q8IZM0 81 aa12.53□□□□□ -0.4
CSPG5-204ENST00000465441 LINC00469Q8N7U9 141 aa12.53□□□□□ -0.4
CSPG5-204ENST00000465441 ALKBH7Q9BT30 221 aaPredicted RBP12.53□□□□□ -0.4
CSPG5-204ENST00000465441 NXT2Q9NPJ8 142 aaKnown RBP12.53□□□□□ -0.4
CSPG5-204ENST00000465441 S100PP25815 95 aa12.52□□□□□ -0.41
CSPG5-204ENST00000465441 C22orf24Q9Y442 160 aa12.52□□□□□ -0.41
CSPG5-204ENST00000465441 CDKN2A-AS1Q9UH64 79 aa12.51□□□□□ -0.41
CSPG5-204ENST00000465441 HERVK_113P63121 156 aa12.5□□□□□ -0.41
CSPG5-204ENST00000465441 XAGE1AQ9HD64 81 aa12.5□□□□□ -0.41
CSPG5-204ENST00000465441 SEC11AP67812 179 aa12.49□□□□□ -0.41
CSPG5-204ENST00000465441 KIAA1644Q3SXP7 199 aa12.49□□□□□ -0.41
CSPG5-204ENST00000465441 PAPPA-AS1Q5QFB9 102 aa12.49□□□□□ -0.41
CSPG5-204ENST00000465441 ZNF861PO60384 105 aa12.48□□□□□ -0.41
CSPG5-204ENST00000465441 G0S2P27469 103 aa12.48□□□□□ -0.41
CSPG5-204ENST00000465441 TOMM6Q96B49 74 aa12.48□□□□□ -0.41
CSPG5-204ENST00000465441 TIMM17AQ99595 171 aa12.48□□□□□ -0.41
CSPG5-204ENST00000465441 GEMIN7Q9H840 131 aaKnown RBP12.48□□□□□ -0.41
CSPG5-204ENST00000465441 COX19Q49B96 90 aa12.47□□□□□ -0.41
CSPG5-204ENST00000465441 GNB1LQ9BYB4 327 aa12.47□□□□□ -0.41
CSPG5-204ENST00000465441 RPS10P5Q9NQ39 176 aa12.47□□□□□ -0.41
CSPG5-204ENST00000465441 F8VRH5 84 aa12.46□□□□□ -0.41
CSPG5-204ENST00000465441 LBHQ53QV2 105 aaPredicted RBP12.46□□□□□ -0.41
CSPG5-204ENST00000465441 NUPR1O60356 82 aa12.45□□□□□ -0.42
CSPG5-204ENST00000465441 RPL13AP40429 203 aaKnown RBP12.44□□□□□ -0.42
CSPG5-204ENST00000465441 ERASQ7Z444 233 aa12.44□□□□□ -0.42
CSPG5-204ENST00000465441 SCGB3A1Q96QR1 104 aa12.44□□□□□ -0.42
CSPG5-204ENST00000465441 NDUFA5Q16718 116 aa12.42□□□□□ -0.42
CSPG5-204ENST00000465441 SVBPQ8N300 66 aa12.42□□□□□ -0.42
CSPG5-204ENST00000465441 SMIM1B2RUZ4 78 aa12.41□□□□□ -0.42
CSPG5-204ENST00000465441 SNAPINO95295 136 aa12.41□□□□□ -0.42
CSPG5-204ENST00000465441 APOC3P02656 99 aa12.41□□□□□ -0.42
CSPG5-204ENST00000465441 CXCL5P42830 114 aa12.41□□□□□ -0.42
CSPG5-204ENST00000465441 MRPL55Q7Z7F7 128 aaKnown RBP12.41□□□□□ -0.42
CSPG5-204ENST00000465441 TP73-AS1Q9UF72 201 aa12.41□□□□□ -0.42
CSPG5-204ENST00000465441 TINCRA0A1B0GVN0 87 aa12.4□□□□□ -0.42
CSPG5-204ENST00000465441 PDZD11Q5EBL8 140 aa12.4□□□□□ -0.42
CSPG5-204ENST00000465441 PRR4Q16378 134 aa12.39□□□□□ -0.43
CSPG5-204ENST00000465441 COX7B2Q8TF08 81 aa12.39□□□□□ -0.43
CSPG5-204ENST00000465441 MRPL18Q9H0U6 180 aaKnown RBP12.39□□□□□ -0.43
CSPG5-204ENST00000465441 LINC01546A6NGU7 62 aa12.38□□□□□ -0.43
CSPG5-204ENST00000465441 LINC00167Q96N53 147 aa12.38□□□□□ -0.43
CSPG5-204ENST00000465441 IGLV5-45A0A087WSX0 123 aa12.37□□□□□ -0.43
CSPG5-204ENST00000465441 CST9LQ9H4G1 147 aa12.37□□□□□ -0.43
CSPG5-204ENST00000465441 RPL37AP8A6NKH3 93 aa12.36□□□□□ -0.43
CSPG5-204ENST00000465441 BCE1O60756 84 aa12.36□□□□□ -0.43
CSPG5-204ENST00000465441 RPL28P46779 137 aaKnown RBP12.35□□□□□ -0.43
CSPG5-204ENST00000465441 RAB5BP61020 215 aa12.35□□□□□ -0.43
CSPG5-204ENST00000465441 FABP9Q0Z7S8 132 aa12.35□□□□□ -0.43
CSPG5-204ENST00000465441 LINC01549A6NIU2 74 aa12.34□□□□□ -0.43
CSPG5-204ENST00000465441 SPINK8P0C7L1 97 aa12.34□□□□□ -0.43
CSPG5-204ENST00000465441 TSPAN13O95857 204 aa12.33□□□□□ -0.44
CSPG5-204ENST00000465441 PMVKQ15126 192 aa12.33□□□□□ -0.44
CSPG5-204ENST00000465441 A0A087X002 238 aa12.32□□□□□ -0.44
CSPG5-204ENST00000465441 GAGE10A6NGK3 116 aa12.32□□□□□ -0.44
CSPG5-204ENST00000465441 TRAPPC1Q9Y5R8 145 aa12.31□□□□□ -0.44
CSPG5-204ENST00000465441 IGLV5-37A0A075B6J1 123 aa12.3□□□□□ -0.44
CSPG5-204ENST00000465441 YPEL4Q96NS1 127 aa12.3□□□□□ -0.44
CSPG5-204ENST00000465441 CRYGAP11844 174 aa12.29□□□□□ -0.44
CSPG5-204ENST00000465441 FA2HQ7L5A8 372 aa12.29□□□□□ -0.44
CSPG5-204ENST00000465441 TYMSOSQ8TAI1 123 aa12.28□□□□□ -0.44
CSPG5-204ENST00000465441 SMCO4Q9NRQ5 59 aa12.28□□□□□ -0.44
CSPG5-204ENST00000465441 ANAPC11Q9NYG5 84 aa12.28□□□□□ -0.44
CSPG5-204ENST00000465441 NKAPP1Q8N9T2 125 aa12.27□□□□□ -0.45
CSPG5-204ENST00000465441 C18orf32Q8TCD1 76 aa12.27□□□□□ -0.45
CSPG5-204ENST00000465441 H3BRM9 83 aa12.26□□□□□ -0.45
CSPG5-204ENST00000465441 KRTAP13-1Q8IUC0 172 aa12.26□□□□□ -0.45
CSPG5-204ENST00000465441 SCO1O75880 301 aa12.25□□□□□ -0.45
CSPG5-204ENST00000465441 ATP5LO75964 103 aa12.25□□□□□ -0.45
CSPG5-204ENST00000465441 IGLC3P0DOY3 106 aa12.24□□□□□ -0.45
CSPG5-204ENST00000465441 PFN2P35080 140 aa12.24□□□□□ -0.45
CSPG5-204ENST00000465441 UBE2AP49459 152 aa12.24□□□□□ -0.45
CSPG5-204ENST00000465441 URB1-AS1Q96HZ7 61 aa12.24□□□□□ -0.45
CSPG5-204ENST00000465441 NDUFA6P56556 154 aa12.23□□□□□ -0.45
CSPG5-204ENST00000465441 MUC2Q02817 5179 aa12.23□□□□□ -0.45
CSPG5-204ENST00000465441 IGKV2-28A0A075B6P5 120 aa12.22□□□□□ -0.45
CSPG5-204ENST00000465441 A0A096LNJ9 63 aa12.22□□□□□ -0.45
CSPG5-204ENST00000465441 IGLV5-39A0A0G2JS06 123 aa12.22□□□□□ -0.45
CSPG5-204ENST00000465441 IGKV2D-28P01615 120 aa12.22□□□□□ -0.45
CSPG5-204ENST00000465441 KRTAP13-2Q52LG2 175 aa12.22□□□□□ -0.45
CSPG5-204ENST00000465441 LINC00614P0C842 121 aa12.21□□□□□ -0.45
CSPG5-204ENST00000465441 ZNF22P17026 224 aaPredicted RBP12.21□□□□□ -0.45
CSPG5-204ENST00000465441 CBLN2Q8IUK8 224 aa12.21□□□□□ -0.45
CSPG5-204ENST00000465441 SLC7A5P1Q8MH63 180 aa12.21□□□□□ -0.45
CSPG5-204ENST00000465441 HBDP02042 147 aa12.18□□□□□ -0.46
CSPG5-204ENST00000465441 VPREB1P12018 145 aa12.18□□□□□ -0.46
CSPG5-204ENST00000465441 SND1-IT1Q9HBX3 110 aa12.18□□□□□ -0.46
CSPG5-204ENST00000465441 ERG28Q9UKR5 140 aa12.18□□□□□ -0.46
CSPG5-204ENST00000465441 ZNF625Q96I27 306 aaPredicted RBP12.17□□□□□ -0.46
CSPG5-204ENST00000465441 FAM229BQ4G0N7 80 aa12.16□□□□□ -0.46
CSPG5-204ENST00000465441 PRLHP81277 87 aa12.15□□□□□ -0.46
CSPG5-204ENST00000465441 RPL24P83731 157 aaKnown RBP12.15□□□□□ -0.46
CSPG5-204ENST00000465441 COX17Q14061 63 aa12.15□□□□□ -0.46
CSPG5-204ENST00000465441 PMCHL1Q16048 86 aa12.15□□□□□ -0.46
CSPG5-204ENST00000465441 FAM19A1Q7Z5A9 133 aa12.15□□□□□ -0.46
CSPG5-204ENST00000465441 TMEM238C9JI98 176 aa12.14□□□□□ -0.47
CSPG5-204ENST00000465441 TMEM126AQ9H061 195 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms