RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 SS18Q15532 418 aa8.8□□□□□ -1
CLCNKA-204ENST00000464764 IGHV4-31P0DP07 118 aa8.79□□□□□ -1
CLCNKA-204ENST00000464764 CLPSL2Q6UWE3 100 aa8.79□□□□□ -1
CLCNKA-204ENST00000464764 TRGV4A0A0C4DH28 118 aa8.79□□□□□ -1
CLCNKA-204ENST00000464764 OBSCN-AS1Q96MR7 158 aa8.79□□□□□ -1
CLCNKA-204ENST00000464764 H0YGX0 51 aa8.79□□□□□ -1
CLCNKA-204ENST00000464764 J3QLI3 93 aa8.79□□□□□ -1
CLCNKA-204ENST00000464764 FSHBP01225 129 aa8.79□□□□□ -1
CLCNKA-204ENST00000464764 XCL1P47992 114 aa8.78□□□□□ -1
CLCNKA-204ENST00000464764 C6orf226Q5I0X4 101 aa8.78□□□□□ -1
CLCNKA-204ENST00000464764 DSCR9P59020 149 aa8.78□□□□□ -1
CLCNKA-204ENST00000464764 IBA57-AS1B1ANH7 110 aa8.77□□□□□ -1.01
CLCNKA-204ENST00000464764 USP17L23D6RBM5 183 aa8.77□□□□□ -1.01
CLCNKA-204ENST00000464764 KRTAP10-9P60411 292 aa8.77□□□□□ -1.01
CLCNKA-204ENST00000464764 TRBV6-8A0A0A6YYG3 113 aa8.77□□□□□ -1.01
CLCNKA-204ENST00000464764 Q6JHZ5 121 aa8.77□□□□□ -1.01
CLCNKA-204ENST00000464764 A0A087WZ39 114 aa8.76□□□□□ -1.01
CLCNKA-204ENST00000464764 J3KT08 172 aa8.76□□□□□ -1.01
CLCNKA-204ENST00000464764 TRBV6-4A0A1B0GX49 114 aa8.76□□□□□ -1.01
CLCNKA-204ENST00000464764 OVOL2Q9BRP0 275 aa8.76□□□□□ -1.01
CLCNKA-204ENST00000464764 TRAV23DV6A0A075B6W5 121 aa8.75□□□□□ -1.01
CLCNKA-204ENST00000464764 A0A096LPF7 62 aa8.75□□□□□ -1.01
CLCNKA-204ENST00000464764 ITPR3Q14573 2671 aa8.75□□□□□ -1.01
CLCNKA-204ENST00000464764 ORMDL1Q9P0S3 153 aa8.75□□□□□ -1.01
CLCNKA-204ENST00000464764 LINC00959A0A1B0GUT2 108 aa8.74□□□□□ -1.01
CLCNKA-204ENST00000464764 CCL24O00175 119 aa8.74□□□□□ -1.01
CLCNKA-204ENST00000464764 SERP2Q8N6R1 65 aa8.74□□□□□ -1.01
CLCNKA-204ENST00000464764 UPK3BQ9BT76 320 aa8.74□□□□□ -1.01
CLCNKA-204ENST00000464764 DEFB130BP0DP73 79 aa8.74□□□□□ -1.01
CLCNKA-204ENST00000464764 DEFB130AP0DP74 79 aa8.74□□□□□ -1.01
CLCNKA-204ENST00000464764 FHL2Q14192 279 aa8.74□□□□□ -1.01
CLCNKA-204ENST00000464764 FAM19A1Q7Z5A9 133 aa8.74□□□□□ -1.01
CLCNKA-204ENST00000464764 OXTP01178 125 aa8.74□□□□□ -1.01
CLCNKA-204ENST00000464764 NANOS2P60321 138 aaKnown RBP8.74□□□□□ -1.01
CLCNKA-204ENST00000464764 FLNAP21333 2647 aaKnown RBP8.73□□□□□ -1.01
CLCNKA-204ENST00000464764 SMIM9A6NGZ8 99 aa8.72□□□□□ -1.01
CLCNKA-204ENST00000464764 C9orf116Q5BN46 136 aaPredicted RBP8.72□□□□□ -1.01
CLCNKA-204ENST00000464764 CCKP06307 115 aa8.72□□□□□ -1.01
CLCNKA-204ENST00000464764 DPH3Q96FX2 82 aa8.72□□□□□ -1.01
CLCNKA-204ENST00000464764 C16orf74Q96GX8 76 aa8.72□□□□□ -1.01
CLCNKA-204ENST00000464764 ENHOQ6UWT2 76 aa8.71□□□□□ -1.01
CLCNKA-204ENST00000464764 Q8N3U1 123 aa8.7□□□□□ -1.02
CLCNKA-204ENST00000464764 TRAV25A0A0B4J276 109 aa8.7□□□□□ -1.02
CLCNKA-204ENST00000464764 LY6G6DO95868 133 aa8.7□□□□□ -1.02
CLCNKA-204ENST00000464764 Q8N814 137 aa8.7□□□□□ -1.02
CLCNKA-204ENST00000464764 Q8NDZ9 215 aa8.7□□□□□ -1.02
CLCNKA-204ENST00000464764 C4orf26Q17RF5 130 aa8.69□□□□□ -1.02
CLCNKA-204ENST00000464764 IGLV10-54A0A075B6I4 117 aa8.69□□□□□ -1.02
CLCNKA-204ENST00000464764 CSNK1G2-AS1Q8NCQ2 148 aa8.69□□□□□ -1.02
CLCNKA-204ENST00000464764 PRB1P04280 392 aa8.69□□□□□ -1.02
CLCNKA-204ENST00000464764 GHRHP01286 108 aa8.68□□□□□ -1.02
CLCNKA-204ENST00000464764 HRCT1Q6UXD1 115 aa8.68□□□□□ -1.02
CLCNKA-204ENST00000464764 NOTCH2Q04721 2471 aa8.68□□□□□ -1.02
CLCNKA-204ENST00000464764 GYPEP15421 78 aa8.68□□□□□ -1.02
CLCNKA-204ENST00000464764 TMEM86BQ8N661 226 aa8.68□□□□□ -1.02
CLCNKA-204ENST00000464764 C20orf197Q8N268 126 aa8.67□□□□□ -1.02
CLCNKA-204ENST00000464764 C19orf73Q9NVV2 129 aa8.67□□□□□ -1.02
CLCNKA-204ENST00000464764 VWFP04275 2813 aa8.67□□□□□ -1.02
CLCNKA-204ENST00000464764 M0R2N4 97 aa8.67□□□□□ -1.02
CLCNKA-204ENST00000464764 SPATA3Q8NHX4 192 aa8.67□□□□□ -1.02
CLCNKA-204ENST00000464764 ESM1Q9NQ30 184 aa8.67□□□□□ -1.02
CLCNKA-204ENST00000464764 RPS28P62857 69 aaKnown RBP8.66□□□□□ -1.02
CLCNKA-204ENST00000464764 C6orf99Q4VX62 202 aa8.66□□□□□ -1.02
CLCNKA-204ENST00000464764 C5orf47Q569G3 176 aa8.66□□□□□ -1.02
CLCNKA-204ENST00000464764 TMEM258P61165 79 aa8.66□□□□□ -1.02
CLCNKA-204ENST00000464764 LINC00269Q8N2A0 174 aa8.66□□□□□ -1.02
CLCNKA-204ENST00000464764 DNAJC9-AS1A6NH13 148 aa8.65□□□□□ -1.02
CLCNKA-204ENST00000464764 LINC00167Q96N53 147 aa8.65□□□□□ -1.03
CLCNKA-204ENST00000464764 Q8IZM0 81 aa8.64□□□□□ -1.03
CLCNKA-204ENST00000464764 TMEM256-PLSCR3K7ERE1 68 aa8.64□□□□□ -1.03
CLCNKA-204ENST00000464764 JMJD7-PLA2G4BH0Y9G9 81 aa8.63□□□□□ -1.03
CLCNKA-204ENST00000464764 KIAA0087Q14695 138 aa8.63□□□□□ -1.03
CLCNKA-204ENST00000464764 BBC3Q96PG8 261 aaPredicted RBP8.63□□□□□ -1.03
CLCNKA-204ENST00000464764 HAMPP81172 84 aa8.62□□□□□ -1.03
CLCNKA-204ENST00000464764 C6orf223Q8N319 242 aa8.62□□□□□ -1.03
CLCNKA-204ENST00000464764 DEFB4AO15263 64 aa8.62□□□□□ -1.03
CLCNKA-204ENST00000464764 UBR5O95071 2799 aaPredicted RBP8.61□□□□□ -1.03
CLCNKA-204ENST00000464764 C10orf25Q5T742 122 aa8.61□□□□□ -1.03
CLCNKA-204ENST00000464764 WFDC11Q8NEX6 87 aa8.61□□□□□ -1.03
CLCNKA-204ENST00000464764 DEFB113Q30KQ7 82 aa8.6□□□□□ -1.03
CLCNKA-204ENST00000464764 UBL5Q9BZL1 73 aa8.6□□□□□ -1.03
CLCNKA-204ENST00000464764 IGLV1-51P01701 117 aa8.6□□□□□ -1.03
CLCNKA-204ENST00000464764 CHCHD10Q8WYQ3 142 aaPredicted RBP8.6□□□□□ -1.03
CLCNKA-204ENST00000464764 LAMTOR3Q9UHA4 124 aa8.6□□□□□ -1.03
CLCNKA-204ENST00000464764 SNURFQ9Y675 71 aa8.6□□□□□ -1.03
CLCNKA-204ENST00000464764 S100A7L2Q5SY68 101 aa8.6□□□□□ -1.03
CLCNKA-204ENST00000464764 SCXQ7RTU7 201 aa8.6□□□□□ -1.03
CLCNKA-204ENST00000464764 LINC01006Q8NI28 216 aa8.59□□□□□ -1.03
CLCNKA-204ENST00000464764 USP24Q9UPU5 2620 aa8.59□□□□□ -1.03
CLCNKA-204ENST00000464764 ANGP03950 147 aaKnown RBP8.59□□□□□ -1.03
CLCNKA-204ENST00000464764 LYPD5Q6UWN5 251 aa8.59□□□□□ -1.03
CLCNKA-204ENST00000464764 A0A1B0GUV1 79 aa8.58□□□□□ -1.04
CLCNKA-204ENST00000464764 Q5XG85 94 aa8.58□□□□□ -1.04
CLCNKA-204ENST00000464764 UNQ6190/PRO20217Q6UXQ8 127 aa8.58□□□□□ -1.04
CLCNKA-204ENST00000464764 LINC00575Q6W349 94 aa8.58□□□□□ -1.04
CLCNKA-204ENST00000464764 RBM3P98179 157 aaKnown RBP8.58□□□□□ -1.04
CLCNKA-204ENST00000464764 TRAV10A0A0B4J240 114 aa8.57□□□□□ -1.04
CLCNKA-204ENST00000464764 Q6ZQT0 140 aa8.57□□□□□ -1.04
CLCNKA-204ENST00000464764 KRTAP1-3Q8IUG1 177 aa8.57□□□□□ -1.04
CLCNKA-204ENST00000464764 CD164L2Q6UWJ8 174 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms