RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 LINC01600Q96MT4 127 aa14.04□□□□□ -0.16
TUBGCP3-204ENST00000464139 SND1-IT1Q9HBX3 110 aa14.04□□□□□ -0.16
TUBGCP3-204ENST00000464139 COX7A2LO14548 114 aa14.03□□□□□ -0.16
TUBGCP3-204ENST00000464139 IBA57-AS1B1ANH7 110 aa14.02□□□□□ -0.16
TUBGCP3-204ENST00000464139 SPART-AS1P0CW21 52 aa14.02□□□□□ -0.16
TUBGCP3-204ENST00000464139 CCL18P55774 89 aa14.02□□□□□ -0.16
TUBGCP3-204ENST00000464139 PPDPFQ9H3Y8 114 aa14.02□□□□□ -0.16
TUBGCP3-204ENST00000464139 IGLV10-54A0A075B6I4 117 aa14.02□□□□□ -0.17
TUBGCP3-204ENST00000464139 IGKV2-28A0A075B6P5 120 aa14.02□□□□□ -0.17
TUBGCP3-204ENST00000464139 IGKV2D-28P01615 120 aa14.02□□□□□ -0.17
TUBGCP3-204ENST00000464139 LINC00337Q8N6G1 96 aa14.02□□□□□ -0.17
TUBGCP3-204ENST00000464139 ANGP03950 147 aaKnown RBP14.01□□□□□ -0.17
TUBGCP3-204ENST00000464139 H3BT86 120 aa14.01□□□□□ -0.17
TUBGCP3-204ENST00000464139 WIPF1O43516 503 aa14□□□□□ -0.17
TUBGCP3-204ENST00000464139 UBE2WQ96B02 151 aa14□□□□□ -0.17
TUBGCP3-204ENST00000464139 CRPP02741 224 aa14□□□□□ -0.17
TUBGCP3-204ENST00000464139 OXLD1Q5BKU9 147 aa14□□□□□ -0.17
TUBGCP3-204ENST00000464139 XGP55808 180 aa13.99□□□□□ -0.17
TUBGCP3-204ENST00000464139 TRAV13-2A0A0B4J235 113 aa13.99□□□□□ -0.17
TUBGCP3-204ENST00000464139 MT-ATP8P03928 68 aa13.99□□□□□ -0.17
TUBGCP3-204ENST00000464139 REG3AQ06141 175 aa13.98□□□□□ -0.17
TUBGCP3-204ENST00000464139 CHCHD10Q8WYQ3 142 aaPredicted RBP13.98□□□□□ -0.17
TUBGCP3-204ENST00000464139 Q8IZM0 81 aa13.98□□□□□ -0.17
TUBGCP3-204ENST00000464139 FBN1P35555 2871 aaKnown RBP13.97□□□□□ -0.17
TUBGCP3-204ENST00000464139 MRPL23Q16540 153 aaKnown RBP13.97□□□□□ -0.17
TUBGCP3-204ENST00000464139 CD164L2Q6UWJ8 174 aa13.96□□□□□ -0.17
TUBGCP3-204ENST00000464139 FAM218AQ96MZ4 157 aa13.96□□□□□ -0.17
TUBGCP3-204ENST00000464139 STAB1Q9NY15 2570 aa13.95□□□□□ -0.18
TUBGCP3-204ENST00000464139 SCGB1A1P11684 91 aa13.95□□□□□ -0.18
TUBGCP3-204ENST00000464139 RPL28P46779 137 aaKnown RBP13.93□□□□□ -0.18
TUBGCP3-204ENST00000464139 KRTAP10-11P60412 298 aa13.93□□□□□ -0.18
TUBGCP3-204ENST00000464139 RETNQ9HD89 108 aa13.93□□□□□ -0.18
TUBGCP3-204ENST00000464139 BAHCC1Q9P281 2608 aa13.93□□□□□ -0.18
TUBGCP3-204ENST00000464139 CKS1BP61024 79 aa13.93□□□□□ -0.18
TUBGCP3-204ENST00000464139 PKD1L1Q8TDX9 2849 aa13.93□□□□□ -0.18
TUBGCP3-204ENST00000464139 KIAA0087Q14695 138 aa13.92□□□□□ -0.18
TUBGCP3-204ENST00000464139 LINC01561Q8N1V8 128 aa13.92□□□□□ -0.18
TUBGCP3-204ENST00000464139 SMIM11BQ8TCY0 68 aa13.92□□□□□ -0.18
TUBGCP3-204ENST00000464139 MALP21145 153 aa13.91□□□□□ -0.18
TUBGCP3-204ENST00000464139 LELP1Q5T871 98 aa13.91□□□□□ -0.18
TUBGCP3-204ENST00000464139 TRAV8-4A0A0B4J246 113 aa13.91□□□□□ -0.18
TUBGCP3-204ENST00000464139 ANK2Q01484 3957 aa13.91□□□□□ -0.18
TUBGCP3-204ENST00000464139 CFAP161Q6P656 301 aa13.9□□□□□ -0.18
TUBGCP3-204ENST00000464139 TRACP01848 142 aa13.89□□□□□ -0.19
TUBGCP3-204ENST00000464139 MAST4O15021 2626 aa13.89□□□□□ -0.19
TUBGCP3-204ENST00000464139 OR13C6PQ8NH95 151 aa13.89□□□□□ -0.19
TUBGCP3-204ENST00000464139 CMYA5Q8N3K9 4069 aa13.88□□□□□ -0.19
TUBGCP3-204ENST00000464139 KRTAP24-1Q3LI83 254 aa13.88□□□□□ -0.19
TUBGCP3-204ENST00000464139 C9orf116Q5BN46 136 aaPredicted RBP13.88□□□□□ -0.19
TUBGCP3-204ENST00000464139 Q9HAA7 133 aa13.88□□□□□ -0.19
TUBGCP3-204ENST00000464139 KLK12Q9UKR0 248 aa13.88□□□□□ -0.19
TUBGCP3-204ENST00000464139 BAALC-AS2P0C853 105 aa13.87□□□□□ -0.19
TUBGCP3-204ENST00000464139 PRR3P79522 188 aaKnown RBP13.85□□□□□ -0.19
TUBGCP3-204ENST00000464139 LYPD5Q6UWN5 251 aa13.85□□□□□ -0.19
TUBGCP3-204ENST00000464139 DEFB121Q5J5C9 76 aa13.85□□□□□ -0.19
TUBGCP3-204ENST00000464139 A0A087WYN8 130 aa13.84□□□□□ -0.19
TUBGCP3-204ENST00000464139 CYSRT1A8MQ03 144 aa13.84□□□□□ -0.19
TUBGCP3-204ENST00000464139 C6orf223Q8N319 242 aa13.84□□□□□ -0.19
TUBGCP3-204ENST00000464139 LINC00526Q96FQ7 95 aa13.84□□□□□ -0.19
TUBGCP3-204ENST00000464139 CXCL5P42830 114 aa13.83□□□□□ -0.2
TUBGCP3-204ENST00000464139 C22orf24Q9Y442 160 aa13.83□□□□□ -0.2
TUBGCP3-204ENST00000464139 ENHOQ6UWT2 76 aa13.82□□□□□ -0.2
TUBGCP3-204ENST00000464139 C3orf56Q8N813 242 aa13.81□□□□□ -0.2
TUBGCP3-204ENST00000464139 PRR34Q9NV39 138 aa13.81□□□□□ -0.2
TUBGCP3-204ENST00000464139 TENM3Q9P273 2699 aa13.81□□□□□ -0.2
TUBGCP3-204ENST00000464139 C10orf25Q5T742 122 aa13.81□□□□□ -0.2
TUBGCP3-204ENST00000464139 COX17Q14061 63 aa13.8□□□□□ -0.2
TUBGCP3-204ENST00000464139 Q6ZTC4 211 aa13.8□□□□□ -0.2
TUBGCP3-204ENST00000464139 SPAG11BQ08648 103 aa13.8□□□□□ -0.2
TUBGCP3-204ENST00000464139 UNQ6190/PRO20217Q6UXQ8 127 aa13.8□□□□□ -0.2
TUBGCP3-204ENST00000464139 KPRPQ5T749 579 aaPredicted RBP13.79□□□□□ -0.2
TUBGCP3-204ENST00000464139 COL6A5A8TX70 2615 aa13.79□□□□□ -0.2
TUBGCP3-204ENST00000464139 H0YGX0 51 aa13.79□□□□□ -0.2
TUBGCP3-204ENST00000464139 KLK5Q9Y337 293 aaPredicted RBP13.79□□□□□ -0.2
TUBGCP3-204ENST00000464139 EGFEM1PQ0D2K5 195 aa13.78□□□□□ -0.2
TUBGCP3-204ENST00000464139 WFDC10BQ8IUB3 73 aa13.78□□□□□ -0.2
TUBGCP3-204ENST00000464139 C15orf53Q8NAA6 179 aa13.78□□□□□ -0.2
TUBGCP3-204ENST00000464139 SNCGO76070 127 aa13.77□□□□□ -0.21
TUBGCP3-204ENST00000464139 DNAL4O96015 105 aa13.77□□□□□ -0.21
TUBGCP3-204ENST00000464139 LECT2O14960 151 aa13.76□□□□□ -0.21
TUBGCP3-204ENST00000464139 Q8NDZ9 215 aa13.76□□□□□ -0.21
TUBGCP3-204ENST00000464139 NANOS2P60321 138 aaKnown RBP13.75□□□□□ -0.21
TUBGCP3-204ENST00000464139 FAM240AA0A1B0GVK7 77 aa13.74□□□□□ -0.21
TUBGCP3-204ENST00000464139 TTC32Q5I0X7 151 aa13.74□□□□□ -0.21
TUBGCP3-204ENST00000464139 NDUFC2O95298 119 aa13.73□□□□□ -0.21
TUBGCP3-204ENST00000464139 NCR3O14931 201 aa13.73□□□□□ -0.21
TUBGCP3-204ENST00000464139 A0A0J9YWU9 116 aa13.72□□□□□ -0.21
TUBGCP3-204ENST00000464139 SLPIP03973 132 aa13.72□□□□□ -0.21
TUBGCP3-204ENST00000464139 NOTCH1P46531 2555 aa13.72□□□□□ -0.21
TUBGCP3-204ENST00000464139 DNAH3Q8TD57 4116 aa13.71□□□□□ -0.21
TUBGCP3-204ENST00000464139 H3BNG1 76 aa13.71□□□□□ -0.21
TUBGCP3-204ENST00000464139 C9orf129Q5T035 196 aaKnown RBP13.71□□□□□ -0.21
TUBGCP3-204ENST00000464139 GAGE2BQ13066 116 aa13.7□□□□□ -0.22
TUBGCP3-204ENST00000464139 GAGE2EQ4V326 116 aa13.7□□□□□ -0.22
TUBGCP3-204ENST00000464139 GAGE2DQ9UEU5 116 aa13.7□□□□□ -0.22
TUBGCP3-204ENST00000464139 TMEM126AQ9H061 195 aa13.69□□□□□ -0.22
TUBGCP3-204ENST00000464139 A0A1B0GV72 72 aa13.69□□□□□ -0.22
TUBGCP3-204ENST00000464139 ESRGQ1W209 222 aa13.69□□□□□ -0.22
TUBGCP3-204ENST00000464139 C6orf48Q9UBA6 75 aa13.66□□□□□ -0.22
TUBGCP3-204ENST00000464139 DEFB131BA0A096LNP1 70 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms