RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 DEFB4AO15263 64 aa6.86□□□□□ -1.31
PTPRD-207ENST00000463477 TRIAP1O43715 76 aa6.86□□□□□ -1.31
PTPRD-207ENST00000463477 SLC25A20O43772 301 aa6.86□□□□□ -1.31
PTPRD-207ENST00000463477 C11orf45Q8TAV5 145 aa6.86□□□□□ -1.31
PTPRD-207ENST00000463477 SCGB1A1P11684 91 aa6.85□□□□□ -1.31
PTPRD-207ENST00000463477 LINC01620Q4KN68 170 aa6.85□□□□□ -1.31
PTPRD-207ENST00000463477 PRO0255Q9UI72 69 aa6.85□□□□□ -1.31
PTPRD-207ENST00000463477 DYNC2H1Q8NCM8 4307 aaKnown RBP6.85□□□□□ -1.31
PTPRD-207ENST00000463477 IGHV3OR16-9A0A0B4J2B5 98 aa6.84□□□□□ -1.31
PTPRD-207ENST00000463477 NUPR2A6NF83 97 aa6.84□□□□□ -1.31
PTPRD-207ENST00000463477 H7C2G1 150 aa6.84□□□□□ -1.31
PTPRD-207ENST00000463477 GAGE6Q13070 117 aa6.84□□□□□ -1.31
PTPRD-207ENST00000463477 LINC01561Q8N1V8 128 aa6.84□□□□□ -1.31
PTPRD-207ENST00000463477 COX7B2Q8TF08 81 aa6.84□□□□□ -1.31
PTPRD-207ENST00000463477 SIGMAR1Q99720 223 aa6.84□□□□□ -1.31
PTPRD-207ENST00000463477 CHCHD5Q9BSY4 110 aa6.84□□□□□ -1.31
PTPRD-207ENST00000463477 IGLV4-60A0A075B6I1 120 aa6.84□□□□□ -1.32
PTPRD-207ENST00000463477 A0A087WZ39 114 aa6.84□□□□□ -1.32
PTPRD-207ENST00000463477 TRBV10-2A0A0K0K1G8 114 aa6.84□□□□□ -1.32
PTPRD-207ENST00000463477 C9JAW5 83 aa6.84□□□□□ -1.32
PTPRD-207ENST00000463477 RPL13AP40429 203 aaKnown RBP6.84□□□□□ -1.32
PTPRD-207ENST00000463477 NANOS2P60321 138 aaKnown RBP6.84□□□□□ -1.32
PTPRD-207ENST00000463477 ANKRD29Q8N6D5 301 aa6.84□□□□□ -1.32
PTPRD-207ENST00000463477 CARD19Q96LW7 228 aa6.84□□□□□ -1.32
PTPRD-207ENST00000463477 H3BT86 120 aa6.83□□□□□ -1.32
PTPRD-207ENST00000463477 LST1O00453 97 aa6.83□□□□□ -1.32
PTPRD-207ENST00000463477 DEFB130BP0DP73 79 aa6.83□□□□□ -1.32
PTPRD-207ENST00000463477 DEFB130AP0DP74 79 aa6.83□□□□□ -1.32
PTPRD-207ENST00000463477 GYPEP15421 78 aa6.83□□□□□ -1.32
PTPRD-207ENST00000463477 PLECQ15149 4684 aaKnown RBP6.83□□□□□ -1.32
PTPRD-207ENST00000463477 MEIG1Q5JSS6 88 aa6.83□□□□□ -1.32
PTPRD-207ENST00000463477 FAM222AQ5U5X8 452 aa6.83□□□□□ -1.32
PTPRD-207ENST00000463477 LYSTQ99698 3801 aa6.82□□□□□ -1.32
PTPRD-207ENST00000463477 SOSTDC1Q6X4U4 206 aa6.82□□□□□ -1.32
PTPRD-207ENST00000463477 KLK5Q9Y337 293 aaPredicted RBP6.82□□□□□ -1.32
PTPRD-207ENST00000463477 SACSQ9NZJ4 4579 aa6.81□□□□□ -1.32
PTPRD-207ENST00000463477 TRAV26-1A0A087WT03 109 aa6.81□□□□□ -1.32
PTPRD-207ENST00000463477 LINC00959A0A1B0GUT2 108 aa6.81□□□□□ -1.32
PTPRD-207ENST00000463477 SPART-AS1P0CW21 52 aa6.81□□□□□ -1.32
PTPRD-207ENST00000463477 NPC2P61916 151 aa6.81□□□□□ -1.32
PTPRD-207ENST00000463477 C21orf62-AS1Q17RA5 79 aa6.81□□□□□ -1.32
PTPRD-207ENST00000463477 DAND5Q8N907 189 aa6.81□□□□□ -1.32
PTPRD-207ENST00000463477 LCE6AA0A183 80 aa6.81□□□□□ -1.32
PTPRD-207ENST00000463477 IBA57-AS1B1ANH7 110 aa6.81□□□□□ -1.32
PTPRD-207ENST00000463477 TMEM262E9PQX1 116 aa6.81□□□□□ -1.32
PTPRD-207ENST00000463477 CELA1Q9UNI1 258 aa6.81□□□□□ -1.32
PTPRD-207ENST00000463477 Q6ZTC4 211 aa6.8□□□□□ -1.32
PTPRD-207ENST00000463477 CDIP1Q9H305 208 aa6.8□□□□□ -1.32
PTPRD-207ENST00000463477 RYR3Q15413 4870 aa6.79□□□□□ -1.32
PTPRD-207ENST00000463477 TRAV13-2A0A0B4J235 113 aa6.79□□□□□ -1.32
PTPRD-207ENST00000463477 TRAV10A0A0B4J240 114 aa6.79□□□□□ -1.32
PTPRD-207ENST00000463477 COX7A2LO14548 114 aa6.79□□□□□ -1.32
PTPRD-207ENST00000463477 PAX4O43316 350 aa6.79□□□□□ -1.32
PTPRD-207ENST00000463477 SS18Q15532 418 aa6.79□□□□□ -1.32
PTPRD-207ENST00000463477 DNAH1Q9P2D7 4330 aa6.78□□□□□ -1.32
PTPRD-207ENST00000463477 C2orf82Q6UX34 121 aa6.77□□□□□ -1.32
PTPRD-207ENST00000463477 Q8IZM0 81 aa6.77□□□□□ -1.32
PTPRD-207ENST00000463477 DEFB131BA0A096LNP1 70 aa6.77□□□□□ -1.33
PTPRD-207ENST00000463477 TRACP01848 142 aa6.77□□□□□ -1.33
PTPRD-207ENST00000463477 ATP5G1P05496 136 aa6.77□□□□□ -1.33
PTPRD-207ENST00000463477 RPL28P46779 137 aaKnown RBP6.77□□□□□ -1.33
PTPRD-207ENST00000463477 DAD1P61803 113 aa6.77□□□□□ -1.33
PTPRD-207ENST00000463477 MIR7-3HGQ8N6C7 128 aa6.77□□□□□ -1.33
PTPRD-207ENST00000463477 NTN5Q8WTR8 489 aaPredicted RBP6.77□□□□□ -1.33
PTPRD-207ENST00000463477 A0A0U1RRA0 63 aa6.76□□□□□ -1.33
PTPRD-207ENST00000463477 CLEC2BQ92478 149 aa6.76□□□□□ -1.33
PTPRD-207ENST00000463477 UBE2WQ96B02 151 aa6.76□□□□□ -1.33
PTPRD-207ENST00000463477 TOMM7Q9P0U1 55 aa6.76□□□□□ -1.33
PTPRD-207ENST00000463477 APLNQ9ULZ1 77 aa6.76□□□□□ -1.33
PTPRD-207ENST00000463477 IGKV3OR2-268A0A0C4DH90 116 aa6.75□□□□□ -1.33
PTPRD-207ENST00000463477 CRPP02741 224 aa6.75□□□□□ -1.33
PTPRD-207ENST00000463477 CXCL5P42830 114 aa6.75□□□□□ -1.33
PTPRD-207ENST00000463477 C5orf38Q86SI9 138 aa6.75□□□□□ -1.33
PTPRD-207ENST00000463477 SND1-IT1Q9HBX3 110 aa6.75□□□□□ -1.33
PTPRD-207ENST00000463477 RYR2Q92736 4967 aa6.75□□□□□ -1.33
PTPRD-207ENST00000463477 MRPL23Q16540 153 aaKnown RBP6.74□□□□□ -1.33
PTPRD-207ENST00000463477 CD164L2Q6UWJ8 174 aa6.74□□□□□ -1.33
PTPRD-207ENST00000463477 LINC00476Q8WZB0 136 aa6.74□□□□□ -1.33
PTPRD-207ENST00000463477 ALMS1Q8TCU4 4167 aa6.74□□□□□ -1.33
PTPRD-207ENST00000463477 HYDINQ4G0P3 5121 aa6.74□□□□□ -1.33
PTPRD-207ENST00000463477 IGKV2-28A0A075B6P5 120 aa6.74□□□□□ -1.33
PTPRD-207ENST00000463477 FAM240AA0A1B0GVK7 77 aa6.74□□□□□ -1.33
PTPRD-207ENST00000463477 IGKV2D-28P01615 120 aa6.74□□□□□ -1.33
PTPRD-207ENST00000463477 CCL18P55774 89 aa6.74□□□□□ -1.33
PTPRD-207ENST00000463477 LINC00158P58513 81 aa6.74□□□□□ -1.33
PTPRD-207ENST00000463477 C6orf226Q5I0X4 101 aa6.74□□□□□ -1.33
PTPRD-207ENST00000463477 LY6G6CO95867 125 aa6.73□□□□□ -1.33
PTPRD-207ENST00000463477 COX17Q14061 63 aa6.73□□□□□ -1.33
PTPRD-207ENST00000463477 LELP1Q5T871 98 aa6.73□□□□□ -1.33
PTPRD-207ENST00000463477 LINC00337Q8N6G1 96 aa6.73□□□□□ -1.33
PTPRD-207ENST00000463477 KMT2AQ03164 3969 aa6.72□□□□□ -1.33
PTPRD-207ENST00000463477 TEX49A0A1B0GTD5 131 aa6.72□□□□□ -1.33
PTPRD-207ENST00000463477 XCL1P47992 114 aa6.72□□□□□ -1.33
PTPRD-207ENST00000463477 H0YGX0 51 aa6.71□□□□□ -1.33
PTPRD-207ENST00000463477 XGP55808 180 aa6.71□□□□□ -1.33
PTPRD-207ENST00000463477 KIAA0087Q14695 138 aa6.71□□□□□ -1.33
PTPRD-207ENST00000463477 VPS13DQ5THJ4 4388 aa6.71□□□□□ -1.33
PTPRD-207ENST00000463477 TRAV8-4A0A0B4J246 113 aa6.71□□□□□ -1.34
PTPRD-207ENST00000463477 H3BNG1 76 aa6.71□□□□□ -1.34
PTPRD-207ENST00000463477 REG3AQ06141 175 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms