RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 C15orf53Q8NAA6 179 aa4.96□□□□□ -1.62
UBE4B-204ENST00000462658 PRO1933Q9H354 126 aa4.96□□□□□ -1.62
UBE4B-204ENST00000462658 FRAS1Q86XX4 4008 aa4.95□□□□□ -1.62
UBE4B-204ENST00000462658 TRAV8-6A0A0B4J262 113 aa4.95□□□□□ -1.62
UBE4B-204ENST00000462658 A0A0J9YXV3 536 aa4.95□□□□□ -1.62
UBE4B-204ENST00000462658 A0A1B0GV90 55 aa4.95□□□□□ -1.62
UBE4B-204ENST00000462658 C11orf86A6NJI1 115 aa4.95□□□□□ -1.62
UBE4B-204ENST00000462658 IGLL5B9A064 214 aa4.95□□□□□ -1.62
UBE4B-204ENST00000462658 TSTD3H0UI37 97 aa4.95□□□□□ -1.62
UBE4B-204ENST00000462658 IGLC3P0DOY3 106 aa4.95□□□□□ -1.62
UBE4B-204ENST00000462658 UBE2D1P51668 147 aa4.95□□□□□ -1.62
UBE4B-204ENST00000462658 RBX1P62877 108 aa4.95□□□□□ -1.62
UBE4B-204ENST00000462658 ESRGQ1W209 222 aa4.95□□□□□ -1.62
UBE4B-204ENST00000462658 MPV17L2Q567V2 206 aa4.95□□□□□ -1.62
UBE4B-204ENST00000462658 C14orf144Q96I85 54 aa4.95□□□□□ -1.62
UBE4B-204ENST00000462658 A0A087WZ39 114 aa4.94□□□□□ -1.62
UBE4B-204ENST00000462658 TRAV13-1A0A0B4J241 112 aa4.94□□□□□ -1.62
UBE4B-204ENST00000462658 TINCRA0A1B0GVN0 87 aa4.94□□□□□ -1.62
UBE4B-204ENST00000462658 TCTAP57738 103 aa4.94□□□□□ -1.62
UBE4B-204ENST00000462658 TMEM170BQ5T4T1 132 aa4.94□□□□□ -1.62
UBE4B-204ENST00000462658 Q8NBF4 154 aa4.94□□□□□ -1.62
UBE4B-204ENST00000462658 CHAC1Q9BUX1 264 aa4.94□□□□□ -1.62
UBE4B-204ENST00000462658 IGKV3OR2-268A0A0C4DH90 116 aa4.93□□□□□ -1.62
UBE4B-204ENST00000462658 ZNF22P17026 224 aaPredicted RBP4.93□□□□□ -1.62
UBE4B-204ENST00000462658 SEC11AP67812 179 aa4.93□□□□□ -1.62
UBE4B-204ENST00000462658 LINC00242Q5T6M2 205 aa4.93□□□□□ -1.62
UBE4B-204ENST00000462658 FAM19A3Q7Z5A8 133 aa4.93□□□□□ -1.62
UBE4B-204ENST00000462658 GEMIN7Q9H840 131 aaKnown RBP4.93□□□□□ -1.62
UBE4B-204ENST00000462658 FAT2Q9NYQ8 4349 aa4.93□□□□□ -1.62
UBE4B-204ENST00000462658 LINC00959A0A1B0GUT2 108 aa4.92□□□□□ -1.62
UBE4B-204ENST00000462658 ANGP03950 147 aaKnown RBP4.92□□□□□ -1.62
UBE4B-204ENST00000462658 DDTP30046 118 aa4.92□□□□□ -1.62
UBE4B-204ENST00000462658 NMUP48645 174 aa4.92□□□□□ -1.62
UBE4B-204ENST00000462658 HERVK_113P61574 105 aa4.92□□□□□ -1.62
UBE4B-204ENST00000462658 HERVK_113P63121 156 aa4.92□□□□□ -1.62
UBE4B-204ENST00000462658 COX6A2Q02221 97 aa4.92□□□□□ -1.62
UBE4B-204ENST00000462658 WFDC10BQ8IUB3 73 aa4.92□□□□□ -1.62
UBE4B-204ENST00000462658 LINC00269Q8N2A0 174 aa4.92□□□□□ -1.62
UBE4B-204ENST00000462658 MIEN1Q9BRT3 115 aa4.92□□□□□ -1.62
UBE4B-204ENST00000462658 UQCR10Q9UDW1 63 aa4.92□□□□□ -1.62
UBE4B-204ENST00000462658 IGKV2D-26A0A0A0MRZ7 120 aa4.91□□□□□ -1.62
UBE4B-204ENST00000462658 TMEM223A0PJW6 202 aa4.91□□□□□ -1.62
UBE4B-204ENST00000462658 E9PLD3 99 aa4.91□□□□□ -1.62
UBE4B-204ENST00000462658 IGHV3-30P01768 117 aa4.91□□□□□ -1.62
UBE4B-204ENST00000462658 IGHV3-33P01772 117 aa4.91□□□□□ -1.62
UBE4B-204ENST00000462658 IGHV3-30-3P0DP02 117 aa4.91□□□□□ -1.62
UBE4B-204ENST00000462658 IGHV3-30-5P0DP03 117 aa4.91□□□□□ -1.62
UBE4B-204ENST00000462658 COX8AP10176 69 aa4.91□□□□□ -1.62
UBE4B-204ENST00000462658 CCL18P55774 89 aa4.91□□□□□ -1.62
UBE4B-204ENST00000462658 REG3AQ06141 175 aa4.91□□□□□ -1.62
UBE4B-204ENST00000462658 SS18Q15532 418 aa4.91□□□□□ -1.62
UBE4B-204ENST00000462658 SLC25A34Q6PIV7 304 aa4.91□□□□□ -1.62
UBE4B-204ENST00000462658 LINC00588Q9Y4M8 146 aa4.91□□□□□ -1.62
UBE4B-204ENST00000462658 HECTD4Q9Y4D8 3996 aa4.9□□□□□ -1.62
UBE4B-204ENST00000462658 NUPR2A6NF83 97 aa4.9□□□□□ -1.63
UBE4B-204ENST00000462658 H3BRM9 83 aa4.9□□□□□ -1.63
UBE4B-204ENST00000462658 CCL25O15444 150 aa4.9□□□□□ -1.63
UBE4B-204ENST00000462658 CLPSL2Q6UWE3 100 aa4.9□□□□□ -1.63
UBE4B-204ENST00000462658 PCP2Q8IVA1 136 aa4.9□□□□□ -1.63
UBE4B-204ENST00000462658 CDKN2A-AS1Q9UH64 79 aa4.9□□□□□ -1.63
UBE4B-204ENST00000462658 KLK12Q9UKR0 248 aa4.9□□□□□ -1.63
UBE4B-204ENST00000462658 APLNQ9ULZ1 77 aa4.9□□□□□ -1.63
UBE4B-204ENST00000462658 KLK5Q9Y337 293 aaPredicted RBP4.9□□□□□ -1.63
UBE4B-204ENST00000462658 MRPS16Q9Y3D3 137 aaKnown RBP4.9□□□□□ -1.63
UBE4B-204ENST00000462658 TENM2Q9NT68 2774 aa4.9□□□□□ -1.63
UBE4B-204ENST00000462658 DNAH11Q96DT5 4516 aa4.9□□□□□ -1.63
UBE4B-204ENST00000462658 DYNC1H1Q14204 4646 aaKnown RBP4.89□□□□□ -1.63
UBE4B-204ENST00000462658 IGHV3-64A0A075B6Q5 118 aa4.89□□□□□ -1.63
UBE4B-204ENST00000462658 EPM2AB3EWF7 344 aa4.89□□□□□ -1.63
UBE4B-204ENST00000462658 LEPROTO15243 131 aa4.89□□□□□ -1.63
UBE4B-204ENST00000462658 DLEU1O43261 78 aa4.89□□□□□ -1.63
UBE4B-204ENST00000462658 SPINK8P0C7L1 97 aa4.89□□□□□ -1.63
UBE4B-204ENST00000462658 LINC01556Q5JQF7 62 aa4.89□□□□□ -1.63
UBE4B-204ENST00000462658 BOD1L2Q8IYS8 172 aa4.89□□□□□ -1.63
UBE4B-204ENST00000462658 PLEKHB2Q96CS7 222 aa4.89□□□□□ -1.63
UBE4B-204ENST00000462658 TTTY13Q9BZ97 58 aa4.89□□□□□ -1.63
UBE4B-204ENST00000462658 PRR34Q9NV39 138 aa4.89□□□□□ -1.63
UBE4B-204ENST00000462658 BIRC6Q9NR09 4857 aa4.88□□□□□ -1.63
UBE4B-204ENST00000462658 TRAV8-3A0A0A6YYJ7 113 aa4.88□□□□□ -1.63
UBE4B-204ENST00000462658 IGHV3OR16-9A0A0B4J2B5 98 aa4.88□□□□□ -1.63
UBE4B-204ENST00000462658 IGHV1-58A0A0C4DH39 117 aa4.88□□□□□ -1.63
UBE4B-204ENST00000462658 J3QQQ9 107 aa4.88□□□□□ -1.63
UBE4B-204ENST00000462658 SIVA1O15304 175 aa4.88□□□□□ -1.63
UBE4B-204ENST00000462658 CRPP02741 224 aa4.88□□□□□ -1.63
UBE4B-204ENST00000462658 DNAH10OSP0CZ25 163 aa4.88□□□□□ -1.63
UBE4B-204ENST00000462658 LGALS3P17931 250 aaKnown RBP4.88□□□□□ -1.63
UBE4B-204ENST00000462658 XCL1P47992 114 aa4.88□□□□□ -1.63
UBE4B-204ENST00000462658 HNRNPA3P51991 378 aaKnown RBP4.88□□□□□ -1.63
UBE4B-204ENST00000462658 ENHOQ6UWT2 76 aa4.88□□□□□ -1.63
UBE4B-204ENST00000462658 CHCHD10Q8WYQ3 142 aaPredicted RBP4.88□□□□□ -1.63
UBE4B-204ENST00000462658 UBE2WQ96B02 151 aa4.88□□□□□ -1.63
UBE4B-204ENST00000462658 UPK3BQ9BT76 320 aa4.88□□□□□ -1.63
UBE4B-204ENST00000462658 TP73-AS1Q9UF72 201 aa4.88□□□□□ -1.63
UBE4B-204ENST00000462658 IGLV10-54A0A075B6I4 117 aa4.87□□□□□ -1.63
UBE4B-204ENST00000462658 TRAV8-4A0A0B4J246 113 aa4.87□□□□□ -1.63
UBE4B-204ENST00000462658 MYMXA0A1B0GTQ4 84 aa4.87□□□□□ -1.63
UBE4B-204ENST00000462658 TSPEAR-AS2P59090 65 aa4.87□□□□□ -1.63
UBE4B-204ENST00000462658 KRTAP10-12P60413 245 aa4.87□□□□□ -1.63
UBE4B-204ENST00000462658 CD164L2Q6UWJ8 174 aa4.87□□□□□ -1.63
UBE4B-204ENST00000462658 C5orf38Q86SI9 138 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms