RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-222	ENST00000462212	C18orf32	Q8TCD1	76 aa		5.24	□□□□□ -1.57
ITSN1-222	ENST00000462212	TRAPPC1	Q9Y5R8	145 aa		5.24	□□□□□ -1.57
ITSN1-222	ENST00000462212	LRP1	Q07954	4544 aa	Known RBP	5.24	□□□□□ -1.57
ITSN1-222	ENST00000462212	TLX1NB	P0CAT3	122 aa		5.23	□□□□□ -1.57
ITSN1-222	ENST00000462212	RAB5B	P61020	215 aa		5.23	□□□□□ -1.57
ITSN1-222	ENST00000462212	HERVK_113	P63121	156 aa		5.23	□□□□□ -1.57
ITSN1-222	ENST00000462212	SEC11A	P67812	179 aa		5.23	□□□□□ -1.57
ITSN1-222	ENST00000462212	UNQ6190/PRO20217	Q6UXQ8	127 aa		5.23	□□□□□ -1.57
ITSN1-222	ENST00000462212	FA2H	Q7L5A8	372 aa		5.23	□□□□□ -1.57
ITSN1-222	ENST00000462212	URB1-AS1	Q96HZ7	61 aa		5.23	□□□□□ -1.57
ITSN1-222	ENST00000462212	SCGB3A1	Q96QR1	104 aa		5.23	□□□□□ -1.57
ITSN1-222	ENST00000462212	C6orf48	Q9UBA6	75 aa		5.23	□□□□□ -1.57
ITSN1-222	ENST00000462212	FAT3	Q8TDW7	4589 aa		5.22	□□□□□ -1.57
ITSN1-222	ENST00000462212	IGLV5-45	A0A087WSX0	123 aa		5.22	□□□□□ -1.57
ITSN1-222	ENST00000462212		A0A096LNJ9	63 aa		5.22	□□□□□ -1.57
ITSN1-222	ENST00000462212		A0A0J9YXV3	536 aa		5.22	□□□□□ -1.57
ITSN1-222	ENST00000462212	GAGE2B	Q13066	116 aa		5.22	□□□□□ -1.57
ITSN1-222	ENST00000462212	C7orf33	Q8WU49	177 aa		5.22	□□□□□ -1.57
ITSN1-222	ENST00000462212	SMCO4	Q9NRQ5	59 aa		5.22	□□□□□ -1.57
ITSN1-222	ENST00000462212	CDKN2A-AS1	Q9UH64	79 aa		5.22	□□□□□ -1.57
ITSN1-222	ENST00000462212	TRBV30	A0A0K0K1B3	111 aa		5.21	□□□□□ -1.58
ITSN1-222	ENST00000462212	TINCR	A0A1B0GVN0	87 aa		5.21	□□□□□ -1.58
ITSN1-222	ENST00000462212		A0A1W2PNN7	141 aa		5.21	□□□□□ -1.58
ITSN1-222	ENST00000462212	OXT	P01178	125 aa		5.21	□□□□□ -1.58
ITSN1-222	ENST00000462212	LINC00614	P0C842	121 aa		5.21	□□□□□ -1.58
ITSN1-222	ENST00000462212	RPL18A	Q02543	176 aa	Known RBP	5.21	□□□□□ -1.58
ITSN1-222	ENST00000462212		Q8IZM0	81 aa		5.21	□□□□□ -1.58
ITSN1-222	ENST00000462212	CST9L	Q9H4G1	147 aa		5.21	□□□□□ -1.58
ITSN1-222	ENST00000462212	GEMIN7	Q9H840	131 aa	Known RBP	5.21	□□□□□ -1.58
ITSN1-222	ENST00000462212	PRR3	P79522	188 aa	Known RBP	5.2	□□□□□ -1.58
ITSN1-222	ENST00000462212	PMVK	Q15126	192 aa		5.2	□□□□□ -1.58
ITSN1-222	ENST00000462212	C9orf116	Q5BN46	136 aa	Predicted RBP	5.2	□□□□□ -1.58
ITSN1-222	ENST00000462212	C2orf82	Q6UX34	121 aa		5.2	□□□□□ -1.58
ITSN1-222	ENST00000462212		Q6ZRP5	223 aa		5.2	□□□□□ -1.58
ITSN1-222	ENST00000462212	SMIM1	B2RUZ4	78 aa		5.19	□□□□□ -1.58
ITSN1-222	ENST00000462212	HBD	P02042	147 aa		5.19	□□□□□ -1.58
ITSN1-222	ENST00000462212	PDZD11	Q5EBL8	140 aa		5.19	□□□□□ -1.58
ITSN1-222	ENST00000462212	CBLN2	Q8IUK8	224 aa		5.19	□□□□□ -1.58
ITSN1-222	ENST00000462212	NDUFC2-KCTD14	E9PQ53	114 aa		5.18	□□□□□ -1.58
ITSN1-222	ENST00000462212	PRSS2	P07478	247 aa		5.18	□□□□□ -1.58
ITSN1-222	ENST00000462212	IGLC3	P0DOY3	106 aa		5.18	□□□□□ -1.58
ITSN1-222	ENST00000462212	CXCL5	P42830	114 aa		5.18	□□□□□ -1.58
ITSN1-222	ENST00000462212	C6orf226	Q5I0X4	101 aa		5.18	□□□□□ -1.58
ITSN1-222	ENST00000462212	PACRG	Q96M98	296 aa	Predicted RBP	5.18	□□□□□ -1.58
ITSN1-222	ENST00000462212	TOMM7	Q9P0U1	55 aa		5.18	□□□□□ -1.58
ITSN1-222	ENST00000462212	C5orf52	A6NGY3	159 aa		5.17	□□□□□ -1.58
ITSN1-222	ENST00000462212		F8VRH5	84 aa		5.17	□□□□□ -1.58
ITSN1-222	ENST00000462212	CKS1B	P61024	79 aa		5.17	□□□□□ -1.58
ITSN1-222	ENST00000462212	PMCHL1	Q16048	86 aa		5.17	□□□□□ -1.58
ITSN1-222	ENST00000462212	GAGE2E	Q4V326	116 aa		5.17	□□□□□ -1.58
ITSN1-222	ENST00000462212	KRTAP7-1	Q8IUC3	87 aa		5.17	□□□□□ -1.58
ITSN1-222	ENST00000462212	GAGE2D	Q9UEU5	116 aa		5.17	□□□□□ -1.58
ITSN1-222	ENST00000462212	FAM168B	A1KXE4	195 aa		5.16	□□□□□ -1.58
ITSN1-222	ENST00000462212	ATP5L	O75964	103 aa		5.16	□□□□□ -1.58
ITSN1-222	ENST00000462212	SRSF9	Q13242	221 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
ITSN1-222	ENST00000462212	C9orf129	Q5T035	196 aa	Known RBP	5.16	□□□□□ -1.58
ITSN1-222	ENST00000462212	PHF5A	Q7RTV0	110 aa	Known RBP	5.16	□□□□□ -1.58
ITSN1-222	ENST00000462212	CHCHD1	Q96BP2	118 aa	Known RBP	5.16	□□□□□ -1.58
ITSN1-222	ENST00000462212	IGLV5-39	A0A0G2JS06	123 aa		5.15	□□□□□ -1.59
ITSN1-222	ENST00000462212		H3BRM9	83 aa		5.15	□□□□□ -1.59
ITSN1-222	ENST00000462212	SPINK8	P0C7L1	97 aa		5.15	□□□□□ -1.59
ITSN1-222	ENST00000462212	MT1HL1	P0DM35	61 aa		5.15	□□□□□ -1.59
ITSN1-222	ENST00000462212	ZNF22	P17026	224 aa	Predicted RBP	5.15	□□□□□ -1.59
ITSN1-222	ENST00000462212	ODF1	Q14990	250 aa		5.15	□□□□□ -1.59
ITSN1-222	ENST00000462212	SPINK6	Q6UWN8	80 aa		5.15	□□□□□ -1.59
ITSN1-222	ENST00000462212	COX7B2	Q8TF08	81 aa		5.15	□□□□□ -1.59
ITSN1-222	ENST00000462212	PSORS1C2	Q9UIG4	136 aa		5.15	□□□□□ -1.59
ITSN1-222	ENST00000462212	TSTD3	H0UI37	97 aa		5.14	□□□□□ -1.59
ITSN1-222	ENST00000462212	TRGC2	P03986	189 aa		5.14	□□□□□ -1.59
ITSN1-222	ENST00000462212	NDUFA6	P56556	154 aa		5.14	□□□□□ -1.59
ITSN1-222	ENST00000462212	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	5.14	□□□□□ -1.59
ITSN1-222	ENST00000462212	SVIP	Q8NHG7	77 aa		5.14	□□□□□ -1.59
ITSN1-222	ENST00000462212	TNXB	P22105	4242 aa		5.13	□□□□□ -1.59
ITSN1-222	ENST00000462212	C11orf86	A6NJI1	115 aa		5.13	□□□□□ -1.59
ITSN1-222	ENST00000462212	COLCA2	A8K830	154 aa		5.13	□□□□□ -1.59
ITSN1-222	ENST00000462212	S100A2	P29034	98 aa		5.13	□□□□□ -1.59
ITSN1-222	ENST00000462212	LINC00310	P59036	64 aa		5.13	□□□□□ -1.59
ITSN1-222	ENST00000462212	SNRPE	P62304	92 aa	Known RBP	5.13	□□□□□ -1.59
ITSN1-222	ENST00000462212	BAGE3	Q86Y29	109 aa		5.13	□□□□□ -1.59
ITSN1-222	ENST00000462212	KRTAP11-1	Q8IUC1	163 aa		5.13	□□□□□ -1.59
ITSN1-222	ENST00000462212	TRAV12-1	A0A0B4J245	112 aa		5.12	□□□□□ -1.59
ITSN1-222	ENST00000462212		M0QXV9	152 aa		5.12	□□□□□ -1.59
ITSN1-222	ENST00000462212	PCP4	P48539	62 aa		5.12	□□□□□ -1.59
ITSN1-222	ENST00000462212	SERTAD4-AS1	Q5TG53	156 aa		5.12	□□□□□ -1.59
ITSN1-222	ENST00000462212	IFI27L1	Q96BM0	104 aa		5.12	□□□□□ -1.59
ITSN1-222	ENST00000462212	LINC01600	Q96MT4	127 aa		5.12	□□□□□ -1.59
ITSN1-222	ENST00000462212	XAGE1A	Q9HD64	81 aa		5.12	□□□□□ -1.59
ITSN1-222	ENST00000462212		A0A1B0GV90	55 aa		5.11	□□□□□ -1.59
ITSN1-222	ENST00000462212	HSBP1	O75506	76 aa		5.11	□□□□□ -1.59
ITSN1-222	ENST00000462212	C1orf137	Q5JT78	98 aa		5.11	□□□□□ -1.59
ITSN1-222	ENST00000462212	FAM19A2	Q8N3H0	131 aa		5.11	□□□□□ -1.59
ITSN1-222	ENST00000462212	CHTOP	Q9Y3Y2	248 aa	Known RBP	5.11	□□□□□ -1.59
ITSN1-222	ENST00000462212	SERF1A	O75920	110 aa		5.1	□□□□□ -1.59
ITSN1-222	ENST00000462212	IGLV7-43	P04211	117 aa		5.1	□□□□□ -1.59
ITSN1-222	ENST00000462212	DDT	P30046	118 aa		5.1	□□□□□ -1.59
ITSN1-222	ENST00000462212	TMEM170B	Q5T4T1	132 aa		5.1	□□□□□ -1.59
ITSN1-222	ENST00000462212	REG3G	Q6UW15	175 aa		5.1	□□□□□ -1.59
ITSN1-222	ENST00000462212	C14orf144	Q96I85	54 aa		5.1	□□□□□ -1.59
ITSN1-222	ENST00000462212	TP73-AS1	Q9UF72	201 aa		5.1	□□□□□ -1.59
ITSN1-222	ENST00000462212	PLA2G2D	Q9UNK4	145 aa		5.1	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms