RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 ERASQ7Z444 233 aa11.55□□□□□ -0.56
VARS-220ENST00000461874 GNB1LQ9BYB4 327 aa11.55□□□□□ -0.56
VARS-220ENST00000461874 M0QXV9 152 aa11.54□□□□□ -0.56
VARS-220ENST00000461874 S100PP25815 95 aa11.54□□□□□ -0.56
VARS-220ENST00000461874 SCGB3A1Q96QR1 104 aa11.54□□□□□ -0.56
VARS-220ENST00000461874 ALKBH7Q9BT30 221 aaPredicted RBP11.54□□□□□ -0.56
VARS-220ENST00000461874 GEMIN7Q9H840 131 aaKnown RBP11.54□□□□□ -0.56
VARS-220ENST00000461874 LRP2P98164 4655 aa11.53□□□□□ -0.56
VARS-220ENST00000461874 DIRC1Q969H9 104 aa11.53□□□□□ -0.56
VARS-220ENST00000461874 LINC01546A6NGU7 62 aa11.52□□□□□ -0.57
VARS-220ENST00000461874 UBE2BP63146 152 aa11.51□□□□□ -0.57
VARS-220ENST00000461874 COX19Q49B96 90 aa11.5□□□□□ -0.57
VARS-220ENST00000461874 COMMD7Q86VX2 200 aa11.5□□□□□ -0.57
VARS-220ENST00000461874 LINC01549A6NIU2 74 aa11.49□□□□□ -0.57
VARS-220ENST00000461874 F8VRH5 84 aa11.49□□□□□ -0.57
VARS-220ENST00000461874 H0Y9J4 135 aa11.49□□□□□ -0.57
VARS-220ENST00000461874 LINC00469Q8N7U9 141 aa11.49□□□□□ -0.57
VARS-220ENST00000461874 TINCRA0A1B0GVN0 87 aa11.48□□□□□ -0.57
VARS-220ENST00000461874 C10orf91Q5T1B1 145 aa11.48□□□□□ -0.57
VARS-220ENST00000461874 IGLV5-45A0A087WSX0 123 aa11.47□□□□□ -0.57
VARS-220ENST00000461874 SMIM1B2RUZ4 78 aa11.47□□□□□ -0.57
VARS-220ENST00000461874 CXCL5P42830 114 aa11.47□□□□□ -0.57
VARS-220ENST00000461874 MRPL18Q9H0U6 180 aaKnown RBP11.47□□□□□ -0.57
VARS-220ENST00000461874 CST9LQ9H4G1 147 aa11.47□□□□□ -0.57
VARS-220ENST00000461874 XAGE1AQ9HD64 81 aa11.47□□□□□ -0.57
VARS-220ENST00000461874 FABP9Q0Z7S8 132 aa11.46□□□□□ -0.57
VARS-220ENST00000461874 PDZD11Q5EBL8 140 aa11.46□□□□□ -0.57
VARS-220ENST00000461874 FA2HQ7L5A8 372 aa11.46□□□□□ -0.57
VARS-220ENST00000461874 RHEBQ15382 184 aa11.45□□□□□ -0.58
VARS-220ENST00000461874 PRR26Q8N8Z3 221 aa11.45□□□□□ -0.58
VARS-220ENST00000461874 CARHSP1Q9Y2V2 147 aaKnown RBP11.45□□□□□ -0.58
VARS-220ENST00000461874 C22orf24Q9Y442 160 aa11.45□□□□□ -0.58
VARS-220ENST00000461874 COX7B2Q8TF08 81 aa11.44□□□□□ -0.58
VARS-220ENST00000461874 RPS10P5Q9NQ39 176 aa11.44□□□□□ -0.58
VARS-220ENST00000461874 PMVKQ15126 192 aa11.43□□□□□ -0.58
VARS-220ENST00000461874 SMCO4Q9NRQ5 59 aa11.43□□□□□ -0.58
VARS-220ENST00000461874 KRTAP1-4P0C5Y4 121 aa11.42□□□□□ -0.58
VARS-220ENST00000461874 LBHQ53QV2 105 aaPredicted RBP11.42□□□□□ -0.58
VARS-220ENST00000461874 SPINK8P0C7L1 97 aa11.4□□□□□ -0.58
VARS-220ENST00000461874 TP73-AS1Q9UF72 201 aa11.4□□□□□ -0.58
VARS-220ENST00000461874 IGLV1-50A0A075B6I6 118 aa11.39□□□□□ -0.59
VARS-220ENST00000461874 NUPR1O60356 82 aa11.39□□□□□ -0.59
VARS-220ENST00000461874 ZNF861PO60384 105 aa11.39□□□□□ -0.59
VARS-220ENST00000461874 MRPL55Q7Z7F7 128 aaKnown RBP11.38□□□□□ -0.59
VARS-220ENST00000461874 A0A096LNJ9 63 aa11.37□□□□□ -0.59
VARS-220ENST00000461874 H3BRM9 83 aa11.37□□□□□ -0.59
VARS-220ENST00000461874 URB1-AS1Q96HZ7 61 aa11.37□□□□□ -0.59
VARS-220ENST00000461874 TRAPPC1Q9Y5R8 145 aa11.37□□□□□ -0.59
VARS-220ENST00000461874 LINC00614P0C842 121 aa11.36□□□□□ -0.59
VARS-220ENST00000461874 IGLC3P0DOY3 106 aa11.36□□□□□ -0.59
VARS-220ENST00000461874 C18orf32Q8TCD1 76 aa11.36□□□□□ -0.59
VARS-220ENST00000461874 RAB5BP61020 215 aa11.35□□□□□ -0.59
VARS-220ENST00000461874 NDUFA6P56556 154 aa11.34□□□□□ -0.59
VARS-220ENST00000461874 LINC00167Q96N53 147 aa11.34□□□□□ -0.59
VARS-220ENST00000461874 IGLV5-39A0A0G2JS06 123 aa11.33□□□□□ -0.6
VARS-220ENST00000461874 ATP5LO75964 103 aa11.33□□□□□ -0.6
VARS-220ENST00000461874 HBDP02042 147 aa11.33□□□□□ -0.6
VARS-220ENST00000461874 BCE1O60756 84 aa11.32□□□□□ -0.6
VARS-220ENST00000461874 APOC3P02656 99 aa11.32□□□□□ -0.6
VARS-220ENST00000461874 RPL13AP40429 203 aaKnown RBP11.32□□□□□ -0.6
VARS-220ENST00000461874 RNF213Q63HN8 5207 aa11.32□□□□□ -0.6
VARS-220ENST00000461874 IGLV5-37A0A075B6J1 123 aa11.31□□□□□ -0.6
VARS-220ENST00000461874 RPL37AP8A6NKH3 93 aa11.31□□□□□ -0.6
VARS-220ENST00000461874 ZNF22P17026 224 aaPredicted RBP11.31□□□□□ -0.6
VARS-220ENST00000461874 PMCHL1Q16048 86 aa11.31□□□□□ -0.6
VARS-220ENST00000461874 RPL28P46779 137 aaKnown RBP11.3□□□□□ -0.6
VARS-220ENST00000461874 GAGE10A6NGK3 116 aa11.29□□□□□ -0.6
VARS-220ENST00000461874 SNAPINO95295 136 aa11.29□□□□□ -0.6
VARS-220ENST00000461874 SVBPQ8N300 66 aa11.28□□□□□ -0.6
VARS-220ENST00000461874 NKAPP1Q8N9T2 125 aa11.28□□□□□ -0.6
VARS-220ENST00000461874 PFN2P35080 140 aa11.27□□□□□ -0.61
VARS-220ENST00000461874 NDUFA5Q16718 116 aa11.27□□□□□ -0.61
VARS-220ENST00000461874 BAGE3Q86Y29 109 aa11.27□□□□□ -0.61
VARS-220ENST00000461874 C11orf86A6NJI1 115 aa11.26□□□□□ -0.61
VARS-220ENST00000461874 LPAP08519 4548 aa11.26□□□□□ -0.61
VARS-220ENST00000461874 ERG28Q9UKR5 140 aa11.25□□□□□ -0.61
VARS-220ENST00000461874 SND1-IT1Q9HBX3 110 aa11.24□□□□□ -0.61
VARS-220ENST00000461874 SCO1O75880 301 aa11.23□□□□□ -0.61
VARS-220ENST00000461874 COX17Q14061 63 aa11.23□□□□□ -0.61
VARS-220ENST00000461874 TMEM170BQ5T4T1 132 aa11.23□□□□□ -0.61
VARS-220ENST00000461874 KRTAP13-1Q8IUC0 172 aa11.23□□□□□ -0.61
VARS-220ENST00000461874 YPEL4Q96NS1 127 aa11.23□□□□□ -0.61
VARS-220ENST00000461874 ZNF625Q96I27 306 aaPredicted RBP11.22□□□□□ -0.61
VARS-220ENST00000461874 IGKV2-28A0A075B6P5 120 aa11.21□□□□□ -0.61
VARS-220ENST00000461874 A0A087X002 238 aa11.21□□□□□ -0.61
VARS-220ENST00000461874 IGKV2D-28P01615 120 aa11.21□□□□□ -0.61
VARS-220ENST00000461874 VPREB1P12018 145 aa11.21□□□□□ -0.61
VARS-220ENST00000461874 SFTA2Q6UW10 78 aa11.21□□□□□ -0.61
VARS-220ENST00000461874 CHTOPQ9Y3Y2 248 aaKnown RBP11.21□□□□□ -0.61
VARS-220ENST00000461874 UBE2AP49459 152 aa11.2□□□□□ -0.62
VARS-220ENST00000461874 CHCHD1Q96BP2 118 aaKnown RBP11.2□□□□□ -0.62
VARS-220ENST00000461874 CRYGAP11844 174 aa11.19□□□□□ -0.62
VARS-220ENST00000461874 RPL24P83731 157 aaKnown RBP11.19□□□□□ -0.62
VARS-220ENST00000461874 TRAV12-1A0A0B4J245 112 aa11.18□□□□□ -0.62
VARS-220ENST00000461874 IFI27L1Q96BM0 104 aa11.18□□□□□ -0.62
VARS-220ENST00000461874 Q8NDZ9 215 aa11.17□□□□□ -0.62
VARS-220ENST00000461874 TMEM223A0PJW6 202 aa11.16□□□□□ -0.62
VARS-220ENST00000461874 PRR4Q16378 134 aa11.16□□□□□ -0.62
VARS-220ENST00000461874 TYMSOSQ8TAI1 123 aa11.16□□□□□ -0.62
VARS-220ENST00000461874 ANAPC11Q9NYG5 84 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms