RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 ZNF861PO60384 105 aa10.71□□□□□ -0.69
SSB-206ENST00000461708 LBHQ53QV2 105 aaPredicted RBP10.71□□□□□ -0.69
SSB-206ENST00000461708 TIMM17AQ99595 171 aa10.71□□□□□ -0.69
SSB-206ENST00000461708 TOMM7Q9P0U1 55 aa10.71□□□□□ -0.69
SSB-206ENST00000461708 LPAP08519 4548 aa10.7□□□□□ -0.7
SSB-206ENST00000461708 CTDSP1Q9GZU7 261 aa10.7□□□□□ -0.7
SSB-206ENST00000461708 TP73-AS1Q9UF72 201 aa10.7□□□□□ -0.7
SSB-206ENST00000461708 F8VRH5 84 aa10.69□□□□□ -0.7
SSB-206ENST00000461708 CDKN2A-AS1Q9UH64 79 aa10.69□□□□□ -0.7
SSB-206ENST00000461708 C22orf24Q9Y442 160 aa10.69□□□□□ -0.7
SSB-206ENST00000461708 CXCL5P42830 114 aa10.68□□□□□ -0.7
SSB-206ENST00000461708 RAB14P61106 215 aa10.68□□□□□ -0.7
SSB-206ENST00000461708 TOMM6Q96B49 74 aa10.68□□□□□ -0.7
SSB-206ENST00000461708 GEMIN7Q9H840 131 aaKnown RBP10.68□□□□□ -0.7
SSB-206ENST00000461708 XAGE1AQ9HD64 81 aa10.67□□□□□ -0.7
SSB-206ENST00000461708 ERASQ7Z444 233 aa10.66□□□□□ -0.7
SSB-206ENST00000461708 LINC00469Q8N7U9 141 aa10.66□□□□□ -0.7
SSB-206ENST00000461708 LINC01549A6NIU2 74 aa10.65□□□□□ -0.7
SSB-206ENST00000461708 TRAV9-1A0A075B6T8 112 aa10.64□□□□□ -0.71
SSB-206ENST00000461708 MRPL55Q7Z7F7 128 aaKnown RBP10.64□□□□□ -0.71
SSB-206ENST00000461708 IGLV5-45A0A087WSX0 123 aa10.63□□□□□ -0.71
SSB-206ENST00000461708 PDZD11Q5EBL8 140 aa10.63□□□□□ -0.71
SSB-206ENST00000461708 TINCRA0A1B0GVN0 87 aa10.62□□□□□ -0.71
SSB-206ENST00000461708 SMIM1B2RUZ4 78 aa10.62□□□□□ -0.71
SSB-206ENST00000461708 BCE1O60756 84 aa10.62□□□□□ -0.71
SSB-206ENST00000461708 RPL28P46779 137 aaKnown RBP10.62□□□□□ -0.71
SSB-206ENST00000461708 SCGB3A1Q96QR1 104 aa10.62□□□□□ -0.71
SSB-206ENST00000461708 LINC01546A6NGU7 62 aa10.61□□□□□ -0.71
SSB-206ENST00000461708 COX7B2Q8TF08 81 aa10.6□□□□□ -0.71
SSB-206ENST00000461708 PRR4Q16378 134 aa10.59□□□□□ -0.71
SSB-206ENST00000461708 KIAA1644Q3SXP7 199 aa10.59□□□□□ -0.71
SSB-206ENST00000461708 CLLU1Q5K131 121 aa10.59□□□□□ -0.71
SSB-206ENST00000461708 IGLV5-37A0A075B6J1 123 aa10.58□□□□□ -0.72
SSB-206ENST00000461708 CST9LQ9H4G1 147 aa10.58□□□□□ -0.72
SSB-206ENST00000461708 ADCYAP1P18509 176 aa10.57□□□□□ -0.72
SSB-206ENST00000461708 UQCC3Q6UW78 93 aa10.57□□□□□ -0.72
SSB-206ENST00000461708 LINC00167Q96N53 147 aa10.57□□□□□ -0.72
SSB-206ENST00000461708 GNB1LQ9BYB4 327 aa10.57□□□□□ -0.72
SSB-206ENST00000461708 MRPL18Q9H0U6 180 aaKnown RBP10.56□□□□□ -0.72
SSB-206ENST00000461708 A0A087X002 238 aa10.55□□□□□ -0.72
SSB-206ENST00000461708 CRYGAP11844 174 aa10.55□□□□□ -0.72
SSB-206ENST00000461708 COX19Q49B96 90 aa10.55□□□□□ -0.72
SSB-206ENST00000461708 TMEM218A2RU14 115 aa10.54□□□□□ -0.72
SSB-206ENST00000461708 PMVKQ15126 192 aa10.54□□□□□ -0.72
SSB-206ENST00000461708 RPL37AP8A6NKH3 93 aa10.53□□□□□ -0.72
SSB-206ENST00000461708 S100PP25815 95 aa10.53□□□□□ -0.72
SSB-206ENST00000461708 KRTAP13-1Q8IUC0 172 aa10.53□□□□□ -0.72
SSB-206ENST00000461708 H3BRM9 83 aa10.52□□□□□ -0.73
SSB-206ENST00000461708 SPINK8P0C7L1 97 aa10.52□□□□□ -0.73
SSB-206ENST00000461708 TYMSOSQ8TAI1 123 aa10.52□□□□□ -0.73
SSB-206ENST00000461708 ATP5LO75964 103 aa10.51□□□□□ -0.73
SSB-206ENST00000461708 NKAPP1Q8N9T2 125 aa10.51□□□□□ -0.73
SSB-206ENST00000461708 TSPAN13O95857 204 aa10.5□□□□□ -0.73
SSB-206ENST00000461708 RAB5BP61020 215 aa10.5□□□□□ -0.73
SSB-206ENST00000461708 FAM229BQ4G0N7 80 aa10.5□□□□□ -0.73
SSB-206ENST00000461708 FA2HQ7L5A8 372 aa10.5□□□□□ -0.73
SSB-206ENST00000461708 SEC11CQ9BY50 192 aa10.5□□□□□ -0.73
SSB-206ENST00000461708 MUC2Q02817 5179 aa10.5□□□□□ -0.73
SSB-206ENST00000461708 IGLV5-39A0A0G2JS06 123 aa10.49□□□□□ -0.73
SSB-206ENST00000461708 GAGE10A6NGK3 116 aa10.49□□□□□ -0.73
SSB-206ENST00000461708 SMCO4Q9NRQ5 59 aa10.49□□□□□ -0.73
SSB-206ENST00000461708 IGLC3P0DOY3 106 aa10.48□□□□□ -0.73
SSB-206ENST00000461708 UBE2AP49459 152 aa10.48□□□□□ -0.73
SSB-206ENST00000461708 COX17Q14061 63 aa10.46□□□□□ -0.73
SSB-206ENST00000461708 CTAG1AP78358 180 aa10.45□□□□□ -0.74
SSB-206ENST00000461708 FABP9Q0Z7S8 132 aa10.45□□□□□ -0.74
SSB-206ENST00000461708 A0A0U1RQV1 116 aa10.44□□□□□ -0.74
SSB-206ENST00000461708 KRTAP13-2Q52LG2 175 aa10.44□□□□□ -0.74
SSB-206ENST00000461708 VPREB1P12018 145 aa10.43□□□□□ -0.74
SSB-206ENST00000461708 PFN2P35080 140 aa10.43□□□□□ -0.74
SSB-206ENST00000461708 SFTA2Q6UW10 78 aa10.43□□□□□ -0.74
SSB-206ENST00000461708 SND1-IT1Q9HBX3 110 aa10.43□□□□□ -0.74
SSB-206ENST00000461708 ANAPC11Q9NYG5 84 aa10.43□□□□□ -0.74
SSB-206ENST00000461708 ERG28Q9UKR5 140 aa10.43□□□□□ -0.74
SSB-206ENST00000461708 IGKV2-28A0A075B6P5 120 aa10.42□□□□□ -0.74
SSB-206ENST00000461708 A0A096LNJ9 63 aa10.42□□□□□ -0.74
SSB-206ENST00000461708 IGKV2D-28P01615 120 aa10.42□□□□□ -0.74
SSB-206ENST00000461708 ZNF22P17026 224 aaPredicted RBP10.42□□□□□ -0.74
SSB-206ENST00000461708 RPL24P83731 157 aaKnown RBP10.42□□□□□ -0.74
SSB-206ENST00000461708 C10orf91Q5T1B1 145 aa10.42□□□□□ -0.74
SSB-206ENST00000461708 IFITM2Q01629 132 aa10.41□□□□□ -0.74
SSB-206ENST00000461708 RHEBQ15382 184 aa10.41□□□□□ -0.74
SSB-206ENST00000461708 TMEM126AQ9H061 195 aa10.41□□□□□ -0.74
SSB-206ENST00000461708 SCO1O75880 301 aa10.4□□□□□ -0.74
SSB-206ENST00000461708 NDUFA6P56556 154 aa10.4□□□□□ -0.74
SSB-206ENST00000461708 LINC00304Q8N9R0 145 aa10.4□□□□□ -0.74
SSB-206ENST00000461708 IGKV2D-26A0A0A0MRZ7 120 aa10.39□□□□□ -0.75
SSB-206ENST00000461708 HBDP02042 147 aa10.39□□□□□ -0.75
SSB-206ENST00000461708 LINC00614P0C842 121 aa10.39□□□□□ -0.75
SSB-206ENST00000461708 C18orf32Q8TCD1 76 aa10.39□□□□□ -0.75
SSB-206ENST00000461708 URB1-AS1Q96HZ7 61 aa10.39□□□□□ -0.75
SSB-206ENST00000461708 PRLHP81277 87 aa10.38□□□□□ -0.75
SSB-206ENST00000461708 M0R378 163 aa10.37□□□□□ -0.75
SSB-206ENST00000461708 FAM19A1Q7Z5A9 133 aa10.37□□□□□ -0.75
SSB-206ENST00000461708 TMEM238C9JI98 176 aa10.36□□□□□ -0.75
SSB-206ENST00000461708 ZNF625Q96I27 306 aaPredicted RBP10.36□□□□□ -0.75
SSB-206ENST00000461708 RPS10P5Q9NQ39 176 aa10.36□□□□□ -0.75
SSB-206ENST00000461708 C11orf86A6NJI1 115 aa10.35□□□□□ -0.75
SSB-206ENST00000461708 COMMD7Q86VX2 200 aa10.35□□□□□ -0.75
SSB-206ENST00000461708 PLEKHB2Q96CS7 222 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms