RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 KLKP1Q107X0 134 aa6.14□□□□□ -1.43
HDAC9-219ENST00000461159 CIRBPQ14011 172 aaKnown RBP6.14□□□□□ -1.43
HDAC9-219ENST00000461159 Q1RN00 199 aa6.14□□□□□ -1.43
HDAC9-219ENST00000461159 TRBV6-5A0A0K0K1A5 114 aa6.13□□□□□ -1.43
HDAC9-219ENST00000461159 IBA57-AS1B1ANH7 110 aa6.13□□□□□ -1.43
HDAC9-219ENST00000461159 C8orf87E5RJ46 101 aa6.13□□□□□ -1.43
HDAC9-219ENST00000461159 NDUFC1O43677 76 aa6.13□□□□□ -1.43
HDAC9-219ENST00000461159 RBM3P98179 157 aaKnown RBP6.13□□□□□ -1.43
HDAC9-219ENST00000461159 C4orf3Q8WVX3 66 aa6.13□□□□□ -1.43
HDAC9-219ENST00000461159 C11orf68Q9H3H3 251 aaKnown RBP6.13□□□□□ -1.43
HDAC9-219ENST00000461159 ANK2Q01484 3957 aa6.13□□□□□ -1.43
HDAC9-219ENST00000461159 CCL24O00175 119 aa6.13□□□□□ -1.43
HDAC9-219ENST00000461159 TRIAP1O43715 76 aa6.13□□□□□ -1.43
HDAC9-219ENST00000461159 C20orf197Q8N268 126 aa6.13□□□□□ -1.43
HDAC9-219ENST00000461159 KLLNB2CW77 178 aa6.12□□□□□ -1.43
HDAC9-219ENST00000461159 H7C2G1 150 aa6.12□□□□□ -1.43
HDAC9-219ENST00000461159 SPATA3Q8NHX4 192 aa6.12□□□□□ -1.43
HDAC9-219ENST00000461159 A0A0J9YX75 114 aa6.12□□□□□ -1.43
HDAC9-219ENST00000461159 INAFM2P0DMQ5 153 aa6.12□□□□□ -1.43
HDAC9-219ENST00000461159 MUSTN1Q8IVN3 82 aa6.12□□□□□ -1.43
HDAC9-219ENST00000461159 DEFB104AQ8WTQ1 72 aa6.12□□□□□ -1.43
HDAC9-219ENST00000461159 MGAM2Q2M2H8 2515 aa6.12□□□□□ -1.43
HDAC9-219ENST00000461159 UBE2D4Q9Y2X8 147 aa6.12□□□□□ -1.43
HDAC9-219ENST00000461159 NBEAL1Q6ZS30 2694 aa6.11□□□□□ -1.43
HDAC9-219ENST00000461159 ADARB2-AS1A8MUL3 147 aa6.11□□□□□ -1.43
HDAC9-219ENST00000461159 IGKV3-20P01619 116 aa6.11□□□□□ -1.43
HDAC9-219ENST00000461159 PRSS2P07478 247 aa6.11□□□□□ -1.43
HDAC9-219ENST00000461159 FAM74A4Q5TZK3 123 aa6.11□□□□□ -1.43
HDAC9-219ENST00000461159 NDUFS5O43920 106 aa6.11□□□□□ -1.43
HDAC9-219ENST00000461159 EIF4EBP3O60516 100 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-219ENST00000461159 GHRHP01286 108 aa6.11□□□□□ -1.43
HDAC9-219ENST00000461159 MUC4Q99102 2169 aa6.1□□□□□ -1.43
HDAC9-219ENST00000461159 TMEM61Q8N0U2 210 aa6.1□□□□□ -1.43
HDAC9-219ENST00000461159 ICOSQ9Y6W8 199 aa6.1□□□□□ -1.43
HDAC9-219ENST00000461159 TRAV13-2A0A0B4J235 113 aa6.1□□□□□ -1.43
HDAC9-219ENST00000461159 TRAV12-3A0A0B4J271 114 aa6.1□□□□□ -1.43
HDAC9-219ENST00000461159 C20orf203Q8NBC4 194 aa6.1□□□□□ -1.43
HDAC9-219ENST00000461159 IGHV3-64A0A075B6Q5 118 aa6.09□□□□□ -1.43
HDAC9-219ENST00000461159 A0A0J9YXY3 114 aa6.09□□□□□ -1.43
HDAC9-219ENST00000461159 I3L3M4 83 aa6.09□□□□□ -1.43
HDAC9-219ENST00000461159 M0QY20 66 aa6.09□□□□□ -1.43
HDAC9-219ENST00000461159 M0R378 163 aa6.09□□□□□ -1.43
HDAC9-219ENST00000461159 KRTAP24-1Q3LI83 254 aa6.09□□□□□ -1.43
HDAC9-219ENST00000461159 OPRPNQ99935 248 aaPredicted RBP6.09□□□□□ -1.43
HDAC9-219ENST00000461159 IGHV3-16A0A0C4DH30 117 aa6.09□□□□□ -1.44
HDAC9-219ENST00000461159 A0A0J9YXV3 536 aa6.09□□□□□ -1.44
HDAC9-219ENST00000461159 DYNLRB2Q8TF09 96 aa6.08□□□□□ -1.44
HDAC9-219ENST00000461159 IGLV4-3A0A075B6K6 122 aa6.08□□□□□ -1.44
HDAC9-219ENST00000461159 LYRM9A8MSI8 78 aa6.08□□□□□ -1.44
HDAC9-219ENST00000461159 FAM222AQ5U5X8 452 aa6.08□□□□□ -1.44
HDAC9-219ENST00000461159 CMYA5Q8N3K9 4069 aa6.07□□□□□ -1.44
HDAC9-219ENST00000461159 TRAV7A0A075B6U4 112 aa6.07□□□□□ -1.44
HDAC9-219ENST00000461159 IGHV3-30-3P0DP02 117 aa6.07□□□□□ -1.44
HDAC9-219ENST00000461159 MPLKIPQ8TAP9 179 aa6.07□□□□□ -1.44
HDAC9-219ENST00000461159 LINC00588Q9Y4M8 146 aa6.07□□□□□ -1.44
HDAC9-219ENST00000461159 IGHV1OR15-1A0A075B7D0 117 aa6.06□□□□□ -1.44
HDAC9-219ENST00000461159 A0A087WVE0 104 aa6.06□□□□□ -1.44
HDAC9-219ENST00000461159 DEFB114Q30KQ6 69 aa6.06□□□□□ -1.44
HDAC9-219ENST00000461159 DEFB131AP59861 70 aa6.06□□□□□ -1.44
HDAC9-219ENST00000461159 ATP5EP2Q5VTU8 51 aa6.06□□□□□ -1.44
HDAC9-219ENST00000461159 WFDC10AQ9H1F0 79 aa6.06□□□□□ -1.44
HDAC9-219ENST00000461159 K7EQG2 157 aa6.05□□□□□ -1.44
HDAC9-219ENST00000461159 LITAFQ99732 161 aa6.05□□□□□ -1.44
HDAC9-219ENST00000461159 NDUFA12Q9UI09 145 aa6.05□□□□□ -1.44
HDAC9-219ENST00000461159 TRAV8-3A0A0A6YYJ7 113 aa6.05□□□□□ -1.44
HDAC9-219ENST00000461159 IGKV3D-7A0A0C4DH55 119 aa6.05□□□□□ -1.44
HDAC9-219ENST00000461159 F8WEM9 126 aa6.05□□□□□ -1.44
HDAC9-219ENST00000461159 UBE2L6O14933 153 aa6.05□□□□□ -1.44
HDAC9-219ENST00000461159 MIAQ16674 131 aa6.05□□□□□ -1.44
HDAC9-219ENST00000461159 ESRGQ1W209 222 aa6.05□□□□□ -1.44
HDAC9-219ENST00000461159 Q6ZVQ6 151 aa6.05□□□□□ -1.44
HDAC9-219ENST00000461159 ZNF73O43830 326 aaPredicted RBP6.04□□□□□ -1.44
HDAC9-219ENST00000461159 PHF5AQ7RTV0 110 aaKnown RBP6.04□□□□□ -1.44
HDAC9-219ENST00000461159 PRM2P04554 102 aa6.04□□□□□ -1.44
HDAC9-219ENST00000461159 CLEC2BQ92478 149 aa6.04□□□□□ -1.44
HDAC9-219ENST00000461159 TMEM256-PLSCR3K7ERE1 68 aa6.03□□□□□ -1.44
HDAC9-219ENST00000461159 Q1T7F1 81 aa6.03□□□□□ -1.44
HDAC9-219ENST00000461159 SPINK13Q1W4C9 94 aa6.03□□□□□ -1.44
HDAC9-219ENST00000461159 S100A7L2Q5SY68 101 aa6.03□□□□□ -1.44
HDAC9-219ENST00000461159 HTN1P15515 57 aa6.03□□□□□ -1.44
HDAC9-219ENST00000461159 NACAE9PAV3 2078 aa6.02□□□□□ -1.45
HDAC9-219ENST00000461159 TRBV10-3A0A0K0K1G6 114 aa6.02□□□□□ -1.45
HDAC9-219ENST00000461159 ADAMTSL4-AS1Q5T5F5 129 aa6.02□□□□□ -1.45
HDAC9-219ENST00000461159 SOSTDC1Q6X4U4 206 aa6.02□□□□□ -1.45
HDAC9-219ENST00000461159 UBE2BP63146 152 aa6.02□□□□□ -1.45
HDAC9-219ENST00000461159 ODF3L2Q3SX64 289 aa6.02□□□□□ -1.45
HDAC9-219ENST00000461159 FAM229BQ4G0N7 80 aa6.02□□□□□ -1.45
HDAC9-219ENST00000461159 DNHD1Q96M86 4753 aa6.01□□□□□ -1.45
HDAC9-219ENST00000461159 DNAL4O96015 105 aa6.01□□□□□ -1.45
HDAC9-219ENST00000461159 MAP6D1Q9H9H5 199 aa6.01□□□□□ -1.45
HDAC9-219ENST00000461159 A8MTW9 85 aa6□□□□□ -1.45
HDAC9-219ENST00000461159 IGLV1-51P01701 117 aa6□□□□□ -1.45
HDAC9-219ENST00000461159 RPL28P46779 137 aaKnown RBP6□□□□□ -1.45
HDAC9-219ENST00000461159 FAM104AQ969W3 186 aa6□□□□□ -1.45
HDAC9-219ENST00000461159 IGHV3-73A0A0B4J1V6 119 aa5.99□□□□□ -1.45
HDAC9-219ENST00000461159 RNASE13Q5GAN3 156 aaKnown RBP5.99□□□□□ -1.45
HDAC9-219ENST00000461159 LCA10Q71F78 164 aa5.99□□□□□ -1.45
HDAC9-219ENST00000461159 IGHV3OR16-12A0A075B7B8 117 aa5.98□□□□□ -1.45
HDAC9-219ENST00000461159 NDUFA1O15239 70 aa5.98□□□□□ -1.45
HDAC9-219ENST00000461159 BAALC-AS2P0C853 105 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms