RNA–Protein interactions for RNA: ENST00000459652.1

SEMA3C-206, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-206ENST00000459652 UBE2D3P61077 147 aa2.74□□□□□ -1.97
SEMA3C-206ENST00000459652 UBE2D2P62837 147 aa2.74□□□□□ -1.97
SEMA3C-206ENST00000459652 Q6ZRN7 208 aaPredicted RBP2.74□□□□□ -1.97
SEMA3C-206ENST00000459652 DEFB124Q8NES8 71 aa2.74□□□□□ -1.97
SEMA3C-206ENST00000459652 S100A16Q96FQ6 103 aaKnown RBP2.74□□□□□ -1.97
SEMA3C-206ENST00000459652 CSMD1Q96PZ7 3565 aa2.74□□□□□ -1.97
SEMA3C-206ENST00000459652 SNRNP200O75643 2136 aaKnown RBP2.74□□□□□ -1.97
SEMA3C-206ENST00000459652 MAP1BP46821 2468 aaKnown RBP2.73□□□□□ -1.97
SEMA3C-206ENST00000459652 IGLV3-32A0A0A0MS00 114 aa2.73□□□□□ -1.97
SEMA3C-206ENST00000459652 CLPSL1A2RUU4 121 aa2.73□□□□□ -1.97
SEMA3C-206ENST00000459652 M0R2N4 97 aa2.73□□□□□ -1.97
SEMA3C-206ENST00000459652 CYP2G1PQ6ZSU1 146 aa2.73□□□□□ -1.97
SEMA3C-206ENST00000459652 CYSTM1Q9H1C7 97 aa2.73□□□□□ -1.97
SEMA3C-206ENST00000459652 HEATR1Q9H583 2144 aaKnown RBP2.73□□□□□ -1.97
SEMA3C-206ENST00000459652 MPDZO75970 2070 aa2.72□□□□□ -1.97
SEMA3C-206ENST00000459652 TLN1Q9Y490 2541 aaKnown RBP2.72□□□□□ -1.97
SEMA3C-206ENST00000459652 TRBV6-5A0A0K0K1A5 114 aa2.72□□□□□ -1.97
SEMA3C-206ENST00000459652 SYS1-DBNDD2H3BUS1 97 aa2.72□□□□□ -1.97
SEMA3C-206ENST00000459652 MRPS14O60783 128 aaKnown RBP2.72□□□□□ -1.97
SEMA3C-206ENST00000459652 UBR5O95071 2799 aaPredicted RBP2.72□□□□□ -1.97
SEMA3C-206ENST00000459652 TRAPPC2P0DI81 140 aa2.72□□□□□ -1.97
SEMA3C-206ENST00000459652 TRAPPC2BP0DI82 140 aa2.72□□□□□ -1.97
SEMA3C-206ENST00000459652 C10orf128Q5T292 105 aa2.72□□□□□ -1.97
SEMA3C-206ENST00000459652 UQCR10Q9UDW1 63 aa2.72□□□□□ -1.97
SEMA3C-206ENST00000459652 PTPRQQ9UMZ3 2332 aa2.72□□□□□ -1.97
SEMA3C-206ENST00000459652 AHCTF1Q8WYP5 2266 aa2.71□□□□□ -1.98
SEMA3C-206ENST00000459652 Q5VV11 94 aa2.71□□□□□ -1.98
SEMA3C-206ENST00000459652 RPS27LQ71UM5 84 aaKnown RBP2.71□□□□□ -1.98
SEMA3C-206ENST00000459652 TPRP12270 2363 aaKnown RBP2.71□□□□□ -1.98
SEMA3C-206ENST00000459652 VPS13CQ709C8 3753 aa2.7□□□□□ -1.98
SEMA3C-206ENST00000459652 TENM4Q6N022 2769 aa2.7□□□□□ -1.98
SEMA3C-206ENST00000459652 TRAV22A0A0B4J277 110 aa2.7□□□□□ -1.98
SEMA3C-206ENST00000459652 H7BZZ5 65 aa2.7□□□□□ -1.98
SEMA3C-206ENST00000459652 KRTAP10-3P60369 221 aa2.7□□□□□ -1.98
SEMA3C-206ENST00000459652 ZNF56Q15929 161 aa2.7□□□□□ -1.98
SEMA3C-206ENST00000459652 LINC00322Q6ZN03 302 aaPredicted RBP2.7□□□□□ -1.98
SEMA3C-206ENST00000459652 TMEM14CQ9P0S9 112 aa2.7□□□□□ -1.98
SEMA3C-206ENST00000459652 PRO1854Q9UHT4 67 aa2.7□□□□□ -1.98
SEMA3C-206ENST00000459652 CR1P17927 2039 aa2.69□□□□□ -1.98
SEMA3C-206ENST00000459652 CHD3Q12873 2000 aaKnown RBP2.69□□□□□ -1.98
SEMA3C-206ENST00000459652 GOLGA4Q13439 2230 aaKnown RBP2.69□□□□□ -1.98
SEMA3C-206ENST00000459652 FLNCQ14315 2725 aa2.69□□□□□ -1.98
SEMA3C-206ENST00000459652 LOC110117498A0A087WWA1 95 aa2.69□□□□□ -1.98
SEMA3C-206ENST00000459652 APOC3P02656 99 aa2.69□□□□□ -1.98
SEMA3C-206ENST00000459652 ELOF1P60002 83 aaKnown RBP2.69□□□□□ -1.98
SEMA3C-206ENST00000459652 KRTAP10-8P60410 259 aa2.69□□□□□ -1.98
SEMA3C-206ENST00000459652 DEFB110Q30KQ9 67 aa2.69□□□□□ -1.98
SEMA3C-206ENST00000459652 ALKAL2Q6UX46 152 aa2.69□□□□□ -1.98
SEMA3C-206ENST00000459652 VMO1Q7Z5L0 202 aa2.69□□□□□ -1.98
SEMA3C-206ENST00000459652 WFDC10AQ9H1F0 79 aa2.69□□□□□ -1.98
SEMA3C-206ENST00000459652 MANBALQ9NQG1 85 aa2.69□□□□□ -1.98
SEMA3C-206ENST00000459652 DNHD1Q96M86 4753 aa2.69□□□□□ -1.98
SEMA3C-206ENST00000459652 UNC13CQ8NB66 2214 aa2.69□□□□□ -1.98
SEMA3C-206ENST00000459652 RTTNQ86VV8 2226 aa2.68□□□□□ -1.98
SEMA3C-206ENST00000459652 CCL3L1P16619 93 aa2.68□□□□□ -1.98
SEMA3C-206ENST00000459652 Q8N6K4 173 aa2.68□□□□□ -1.98
SEMA3C-206ENST00000459652 CDC42SE2Q9NRR3 84 aa2.68□□□□□ -1.98
SEMA3C-206ENST00000459652 LENEPQ9Y5L5 61 aa2.68□□□□□ -1.98
SEMA3C-206ENST00000459652 ZNF469Q96JG9 3925 aaPredicted RBP2.68□□□□□ -1.98
SEMA3C-206ENST00000459652 MDC1Q14676 2089 aaKnown RBP2.68□□□□□ -1.98
SEMA3C-206ENST00000459652 ZNF462Q96JM2 2506 aa2.67□□□□□ -1.98
SEMA3C-206ENST00000459652 SMIM31A0A1B0GVY4 71 aa2.67□□□□□ -1.98
SEMA3C-206ENST00000459652 H0YGG7 62 aa2.67□□□□□ -1.98
SEMA3C-206ENST00000459652 COX6CP09669 75 aa2.67□□□□□ -1.98
SEMA3C-206ENST00000459652 RPL37AP61513 92 aaKnown RBP2.67□□□□□ -1.98
SEMA3C-206ENST00000459652 SSBP1Q04837 148 aaKnown RBP2.67□□□□□ -1.98
SEMA3C-206ENST00000459652 C20orf197Q8N268 126 aa2.67□□□□□ -1.98
SEMA3C-206ENST00000459652 NXT2Q9NPJ8 142 aaKnown RBP2.67□□□□□ -1.98
SEMA3C-206ENST00000459652 USP9XQ93008 2570 aaPredicted RBP2.67□□□□□ -1.98
SEMA3C-206ENST00000459652 CSMD2Q7Z408 3487 aa2.67□□□□□ -1.98
SEMA3C-206ENST00000459652 ACACAQ13085 2346 aa2.67□□□□□ -1.98
SEMA3C-206ENST00000459652 PIEZO2Q9H5I5 2752 aa2.66□□□□□ -1.98
SEMA3C-206ENST00000459652 FN1P02751 2386 aaKnown RBP2.66□□□□□ -1.98
SEMA3C-206ENST00000459652 COL12A1Q99715 3063 aa2.66□□□□□ -1.98
SEMA3C-206ENST00000459652 HELZ2Q9BYK8 2649 aaKnown RBP2.66□□□□□ -1.98
SEMA3C-206ENST00000459652 TRBV6-7A0A0A0MS04 114 aa2.66□□□□□ -1.98
SEMA3C-206ENST00000459652 IGKV3D-7A0A0C4DH55 119 aa2.66□□□□□ -1.98
SEMA3C-206ENST00000459652 IGKV3OR2-268A0A0C4DH90 116 aa2.66□□□□□ -1.98
SEMA3C-206ENST00000459652 NBDYA0A0U1RRE5 68 aa2.66□□□□□ -1.98
SEMA3C-206ENST00000459652 LOC101927531A0A1B0GV80 90 aa2.66□□□□□ -1.98
SEMA3C-206ENST00000459652 BCE1O60756 84 aa2.66□□□□□ -1.98
SEMA3C-206ENST00000459652 STATHP02808 62 aa2.66□□□□□ -1.98
SEMA3C-206ENST00000459652 KLKP1Q107X0 134 aa2.66□□□□□ -1.98
SEMA3C-206ENST00000459652 SPATA45Q537H7 98 aa2.66□□□□□ -1.98
SEMA3C-206ENST00000459652 ZNF625Q96I27 306 aaPredicted RBP2.66□□□□□ -1.98
SEMA3C-206ENST00000459652 BPESC1Q9GZL8 116 aa2.66□□□□□ -1.98
SEMA3C-206ENST00000459652 ST20Q9HBF5 79 aa2.66□□□□□ -1.98
SEMA3C-206ENST00000459652 NDUFA4L2Q9NRX3 87 aa2.66□□□□□ -1.98
SEMA3C-206ENST00000459652 FBN2P35556 2912 aa2.66□□□□□ -1.98
SEMA3C-206ENST00000459652 ZGRF1Q86YA3 2104 aa2.66□□□□□ -1.98
SEMA3C-206ENST00000459652 GCN1Q92616 2671 aaKnown RBP2.65□□□□□ -1.99
SEMA3C-206ENST00000459652 CHKB-CPT1BH3BT56 60 aa2.65□□□□□ -1.99
SEMA3C-206ENST00000459652 DNAL4O96015 105 aa2.65□□□□□ -1.99
SEMA3C-206ENST00000459652 IGKV1-17P01599 117 aa2.65□□□□□ -1.99
SEMA3C-206ENST00000459652 IFI6P09912 130 aa2.65□□□□□ -1.99
SEMA3C-206ENST00000459652 EDDM3BP56851 147 aa2.65□□□□□ -1.99
SEMA3C-206ENST00000459652 Q86TA4 180 aa2.65□□□□□ -1.99
SEMA3C-206ENST00000459652 LINC01600Q96MT4 127 aa2.65□□□□□ -1.99
SEMA3C-206ENST00000459652 DYNLRB1Q9NP97 96 aa2.65□□□□□ -1.99
SEMA3C-206ENST00000459652 SPCS1Q9Y6A9 102 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms