RNA–Protein interactions for RNA: ENST00000459652.1

SEMA3C-206, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-206ENST00000459652 AEBP2Q6ZN18 517 aaPredicted RBP22.97■■□□□ 1.27
SEMA3C-206ENST00000459652 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
SEMA3C-206ENST00000459652 SENP3Q9H4L4 574 aaPredicted RBP20.09■□□□□ 0.81
SEMA3C-206ENST00000459652 POTEDQ86YR6 584 aa19.8■□□□□ 0.76
SEMA3C-206ENST00000459652 PHF23Q9BUL5 403 aaPredicted RBP19.49■□□□□ 0.71
SEMA3C-206ENST00000459652 FOXD1Q16676 465 aa18.67■□□□□ 0.58
SEMA3C-206ENST00000459652 MSH5O43196 834 aa18.24■□□□□ 0.51
SEMA3C-206ENST00000459652 PIAS4Q8N2W9 510 aaPredicted RBP17.21■□□□□ 0.35
SEMA3C-206ENST00000459652 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
SEMA3C-206ENST00000459652 CACNB1Q02641 598 aaPredicted RBP16.32■□□□□ 0.2
SEMA3C-206ENST00000459652 ADRA2BP18089 450 aa16.24■□□□□ 0.19
SEMA3C-206ENST00000459652 PLPPR3Q6T4P5 718 aa16.07■□□□□ 0.16
SEMA3C-206ENST00000459652 DMRT2Q9Y5R5 561 aa15.66■□□□□ 0.1
SEMA3C-206ENST00000459652 POTEHQ6S545 545 aa15.32■□□□□ 0.04
SEMA3C-206ENST00000459652 RNF39Q9H2S5 420 aa15.31■□□□□ 0.04
SEMA3C-206ENST00000459652 MAPK8IP2Q13387 824 aaPredicted RBP15.25■□□□□ 0.03
SEMA3C-206ENST00000459652 SCAF1Q9H7N4 1312 aaKnown RBP15.22■□□□□ 0.03
SEMA3C-206ENST00000459652 C1QBPQ07021 282 aaKnown RBP15.13■□□□□ 0.01
SEMA3C-206ENST00000459652 DCAF8L1A6NGE4 600 aa14.99□□□□□ -0.01
SEMA3C-206ENST00000459652 HOXD11P31277 338 aaPredicted RBP14.59□□□□□ -0.07
SEMA3C-206ENST00000459652 DNAJC5BQ9UF47 199 aa14.56□□□□□ -0.08
SEMA3C-206ENST00000459652 RNF216Q9NWF9 866 aaPredicted RBP14.16□□□□□ -0.14
SEMA3C-206ENST00000459652 CNKSR2Q8WXI2 1034 aa13.95□□□□□ -0.18
SEMA3C-206ENST00000459652 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.88□□□□□ -0.19
SEMA3C-206ENST00000459652 DSG3P32926 999 aa13.86□□□□□ -0.19
SEMA3C-206ENST00000459652 PPP4R3CPQ6ZMV5 832 aa13.79□□□□□ -0.2
SEMA3C-206ENST00000459652 SP7Q8TDD2 431 aaPredicted RBP13.77□□□□□ -0.21
SEMA3C-206ENST00000459652 CAPN15O75808 1086 aa13.64□□□□□ -0.23
SEMA3C-206ENST00000459652 CHRDL2Q6WN34 429 aa13.53□□□□□ -0.24
SEMA3C-206ENST00000459652 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
SEMA3C-206ENST00000459652 SPINK5Q9NQ38 1064 aaPredicted RBP13.48□□□□□ -0.25
SEMA3C-206ENST00000459652 U3KPZ7 1027 aaPredicted RBP13.35□□□□□ -0.27
SEMA3C-206ENST00000459652 APLP2Q06481 763 aa13.21□□□□□ -0.29
SEMA3C-206ENST00000459652 ZNF219Q9P2Y4 722 aaPredicted RBP13.2□□□□□ -0.3
SEMA3C-206ENST00000459652 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
SEMA3C-206ENST00000459652 PLSCR2Q9NRY7 297 aa13.1□□□□□ -0.31
SEMA3C-206ENST00000459652 ABCB7O75027 752 aa13.09□□□□□ -0.31
SEMA3C-206ENST00000459652 TRHP20396 242 aaPredicted RBP13.07□□□□□ -0.32
SEMA3C-206ENST00000459652 HAX1O00165 279 aa13.03□□□□□ -0.32
SEMA3C-206ENST00000459652 EHMT2Q96KQ7 1210 aa12.95□□□□□ -0.34
SEMA3C-206ENST00000459652 NPM3O75607 178 aaKnown RBP12.94□□□□□ -0.34
SEMA3C-206ENST00000459652 LHX8Q68G74 356 aa12.88□□□□□ -0.35
SEMA3C-206ENST00000459652 PIP4P2Q8N4L2 257 aa12.87□□□□□ -0.35
SEMA3C-206ENST00000459652 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.82□□□□□ -0.36
SEMA3C-206ENST00000459652 HNRNPUL2Q1KMD3 747 aaKnown RBP12.82□□□□□ -0.36
SEMA3C-206ENST00000459652 AKT1S1Q96B36 256 aa12.81□□□□□ -0.36
SEMA3C-206ENST00000459652 SLC24A1O60721 1099 aa12.7□□□□□ -0.38
SEMA3C-206ENST00000459652 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.39
SEMA3C-206ENST00000459652 SAMD1Q6SPF0 538 aaPredicted RBP12.61□□□□□ -0.39
SEMA3C-206ENST00000459652 REM2Q8IYK8 340 aaPredicted RBP12.57□□□□□ -0.4
SEMA3C-206ENST00000459652 EVX2Q03828 476 aa12.56□□□□□ -0.4
SEMA3C-206ENST00000459652 KCNA4P22459 653 aa12.54□□□□□ -0.4
SEMA3C-206ENST00000459652 POLA2Q14181 598 aa12.43□□□□□ -0.42
SEMA3C-206ENST00000459652 PITPNM1O00562 1244 aa12.42□□□□□ -0.42
SEMA3C-206ENST00000459652 SLC4A2P04920 1241 aa12.4□□□□□ -0.42
SEMA3C-206ENST00000459652 CSRNP3Q8WYN3 585 aa12.4□□□□□ -0.42
SEMA3C-206ENST00000459652 GABBR2O75899 941 aa12.38□□□□□ -0.43
SEMA3C-206ENST00000459652 ZBTB12Q9Y330 459 aaPredicted RBP12.34□□□□□ -0.43
SEMA3C-206ENST00000459652 PCDH10Q9P2E7 1040 aa12.3□□□□□ -0.44
SEMA3C-206ENST00000459652 C19orf67A6NJJ6 358 aa12.28□□□□□ -0.44
SEMA3C-206ENST00000459652 POTEMA6NI47 508 aa12.19□□□□□ -0.46
SEMA3C-206ENST00000459652 SLC4A1APQ9BWU0 796 aaKnown RBP12.12□□□□□ -0.47
SEMA3C-206ENST00000459652 PRKAR2AP13861 404 aaKnown RBP12.11□□□□□ -0.47
SEMA3C-206ENST00000459652 CLCN6P51797 869 aa12.09□□□□□ -0.47
SEMA3C-206ENST00000459652 POTEGQ6S5H5 508 aa12.08□□□□□ -0.48
SEMA3C-206ENST00000459652 OSCARQ8IYS5 282 aa12.06□□□□□ -0.48
SEMA3C-206ENST00000459652 AMER1Q5JTC6 1135 aaPredicted RBP12.05□□□□□ -0.48
SEMA3C-206ENST00000459652 RTN4Q9NQC3 1192 aaKnown RBP12.04□□□□□ -0.48
SEMA3C-206ENST00000459652 POTEIP0CG38 1075 aa12□□□□□ -0.49
SEMA3C-206ENST00000459652 MYCNP04198 464 aaPredicted RBP11.97□□□□□ -0.49
SEMA3C-206ENST00000459652 OTUD5Q96G74 571 aa11.87□□□□□ -0.51
SEMA3C-206ENST00000459652 DCBLD2Q96PD2 775 aa11.87□□□□□ -0.51
SEMA3C-206ENST00000459652 SPDYE1Q8NFV5 336 aaPredicted RBP11.86□□□□□ -0.51
SEMA3C-206ENST00000459652 CLEC11AQ9Y240 323 aa11.77□□□□□ -0.53
SEMA3C-206ENST00000459652 FOXD4L1Q9NU39 408 aa11.75□□□□□ -0.53
SEMA3C-206ENST00000459652 SPDYE2BA6NHP3 402 aa11.74□□□□□ -0.53
SEMA3C-206ENST00000459652 SPDYE6P0CI01 402 aa11.74□□□□□ -0.53
SEMA3C-206ENST00000459652 SPDYE2Q495Y8 402 aa11.74□□□□□ -0.53
SEMA3C-206ENST00000459652 ATF5Q9Y2D1 282 aaPredicted RBP11.73□□□□□ -0.53
SEMA3C-206ENST00000459652 CD44P16070 742 aaKnown RBP11.67□□□□□ -0.54
SEMA3C-206ENST00000459652 ZBTB22O15209 634 aa11.58□□□□□ -0.56
SEMA3C-206ENST00000459652 CHADLQ6NUI6 762 aa11.57□□□□□ -0.56
SEMA3C-206ENST00000459652 POTEB2H3BUK9 544 aa11.55□□□□□ -0.56
SEMA3C-206ENST00000459652 MAMSTRQ6ZN01 415 aa11.51□□□□□ -0.57
SEMA3C-206ENST00000459652 ZNF579Q8NAF0 562 aaKnown RBP11.49□□□□□ -0.57
SEMA3C-206ENST00000459652 PRR29P0C7W0 189 aa11.47□□□□□ -0.57
SEMA3C-206ENST00000459652 LCE2DQ5TA82 110 aaPredicted RBP11.43□□□□□ -0.58
SEMA3C-206ENST00000459652 FARP1Q9Y4F1 1045 aaPredicted RBP11.41□□□□□ -0.58
SEMA3C-206ENST00000459652 FAM163AQ96GL9 167 aaPredicted RBP11.4□□□□□ -0.58
SEMA3C-206ENST00000459652 FBLN2P98095 1184 aa11.38□□□□□ -0.59
SEMA3C-206ENST00000459652 ATXN8OSP0DMR3 200 aa11.37□□□□□ -0.59
SEMA3C-206ENST00000459652 CDAN1Q8IWY9 1227 aa11.37□□□□□ -0.59
SEMA3C-206ENST00000459652 SSUH2Q9Y2M2 353 aa11.36□□□□□ -0.59
SEMA3C-206ENST00000459652 ZNF692Q9BU19 519 aaPredicted RBP11.31□□□□□ -0.6
SEMA3C-206ENST00000459652 SCUBE2Q9NQ36 999 aa11.31□□□□□ -0.6
SEMA3C-206ENST00000459652 GALR2O43603 387 aaPredicted RBP11.3□□□□□ -0.6
SEMA3C-206ENST00000459652 ZRANB1Q9UGI0 708 aa11.29□□□□□ -0.6
SEMA3C-206ENST00000459652 C7P10643 843 aa11.23□□□□□ -0.61
SEMA3C-206ENST00000459652 MMRN1Q13201 1228 aa11.23□□□□□ -0.61
SEMA3C-206ENST00000459652 SLC39A7Q92504 469 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms