RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 NTM-AS1Q6ZSK4 140 aa6.05□□□□□ -1.44
VPS50-208ENST00000458707 C18orf65Q6ZTR6 163 aa6.05□□□□□ -1.44
VPS50-208ENST00000458707 DSCR8Q96T75 97 aa6.05□□□□□ -1.44
VPS50-208ENST00000458707 CDC42SE2Q9NRR3 84 aa6.05□□□□□ -1.44
VPS50-208ENST00000458707 SPG11Q96JI7 2443 aa6.04□□□□□ -1.44
VPS50-208ENST00000458707 MAP1AP78559 2803 aaPredicted RBP6.04□□□□□ -1.44
VPS50-208ENST00000458707 RPL28P46779 137 aaKnown RBP6.04□□□□□ -1.44
VPS50-208ENST00000458707 RPL36AP83881 106 aaKnown RBP6.04□□□□□ -1.44
VPS50-208ENST00000458707 HIST2H2BDQ6DRA6 164 aa6.04□□□□□ -1.44
VPS50-208ENST00000458707 RPL36ALQ969Q0 106 aaKnown RBP6.04□□□□□ -1.44
VPS50-208ENST00000458707 FAM218AQ96MZ4 157 aa6.04□□□□□ -1.44
VPS50-208ENST00000458707 K7EQD1 137 aa6.03□□□□□ -1.44
VPS50-208ENST00000458707 INAFM2P0DMQ5 153 aa6.03□□□□□ -1.44
VPS50-208ENST00000458707 CD164Q04900 197 aa6.03□□□□□ -1.44
VPS50-208ENST00000458707 DEFB114Q30KQ6 69 aa6.03□□□□□ -1.44
VPS50-208ENST00000458707 C4orf3Q8WVX3 66 aa6.03□□□□□ -1.44
VPS50-208ENST00000458707 SERP1Q9Y6X1 66 aa6.03□□□□□ -1.44
VPS50-208ENST00000458707 TRAV13-2A0A0B4J235 113 aa6.02□□□□□ -1.44
VPS50-208ENST00000458707 SERP2Q8N6R1 65 aa6.02□□□□□ -1.44
VPS50-208ENST00000458707 Q96MF0 132 aa6.02□□□□□ -1.44
VPS50-208ENST00000458707 MXRA5Q9NR99 2828 aa6.02□□□□□ -1.45
VPS50-208ENST00000458707 DYNLRB2Q8TF09 96 aa6.02□□□□□ -1.45
VPS50-208ENST00000458707 OVOL2Q9BRP0 275 aa6.02□□□□□ -1.45
VPS50-208ENST00000458707 CYSTM1Q9H1C7 97 aa6.02□□□□□ -1.45
VPS50-208ENST00000458707 ITPR2Q14571 2701 aa6.01□□□□□ -1.45
VPS50-208ENST00000458707 SMIM26A0A096LP01 95 aa6.01□□□□□ -1.45
VPS50-208ENST00000458707 TRGV1A0A0A0MS02 117 aa6.01□□□□□ -1.45
VPS50-208ENST00000458707 ODF3L2Q3SX64 289 aa6.01□□□□□ -1.45
VPS50-208ENST00000458707 FLNCQ14315 2725 aa6.01□□□□□ -1.45
VPS50-208ENST00000458707 F8P00451 2351 aa6.01□□□□□ -1.45
VPS50-208ENST00000458707 IGKV2-28A0A075B6P5 120 aa6□□□□□ -1.45
VPS50-208ENST00000458707 IGKV2D-28P01615 120 aa6□□□□□ -1.45
VPS50-208ENST00000458707 LINC01561Q8N1V8 128 aa6□□□□□ -1.45
VPS50-208ENST00000458707 LINC00337Q8N6G1 96 aa6□□□□□ -1.45
VPS50-208ENST00000458707 XCL2Q9UBD3 114 aa6□□□□□ -1.45
VPS50-208ENST00000458707 CRPP02741 224 aa6□□□□□ -1.45
VPS50-208ENST00000458707 RPL18AQ02543 176 aaKnown RBP6□□□□□ -1.45
VPS50-208ENST00000458707 PMAIP1Q13794 54 aa6□□□□□ -1.45
VPS50-208ENST00000458707 Q6ZTI0 123 aa6□□□□□ -1.45
VPS50-208ENST00000458707 COX7B2Q8TF08 81 aa6□□□□□ -1.45
VPS50-208ENST00000458707 ZANQ9Y493 2812 aa5.99□□□□□ -1.45
VPS50-208ENST00000458707 OBSCN-AS1Q96MR7 158 aa5.99□□□□□ -1.45
VPS50-208ENST00000458707 TMEM243Q9BU79 118 aa5.99□□□□□ -1.45
VPS50-208ENST00000458707 UBE2L6O14933 153 aa5.98□□□□□ -1.45
VPS50-208ENST00000458707 STHQ8IWL8 128 aa5.98□□□□□ -1.45
VPS50-208ENST00000458707 MIR7-3HGQ8N6C7 128 aa5.98□□□□□ -1.45
VPS50-208ENST00000458707 SND1-IT1Q9HBX3 110 aa5.98□□□□□ -1.45
VPS50-208ENST00000458707 OTOGQ6ZRI0 2925 aa5.98□□□□□ -1.45
VPS50-208ENST00000458707 H0YGX0 51 aa5.98□□□□□ -1.45
VPS50-208ENST00000458707 IGHV4-31P0DP07 118 aa5.98□□□□□ -1.45
VPS50-208ENST00000458707 Q9HAA7 133 aa5.98□□□□□ -1.45
VPS50-208ENST00000458707 MAPK1IP1LQ8NDC0 245 aa5.97□□□□□ -1.45
VPS50-208ENST00000458707 SMIM11BQ8TCY0 68 aa5.97□□□□□ -1.45
VPS50-208ENST00000458707 KRTAP4-9Q9BYQ8 210 aa5.97□□□□□ -1.45
VPS50-208ENST00000458707 UTP20O75691 2785 aaKnown RBP5.96□□□□□ -1.45
VPS50-208ENST00000458707 A0A087WYN8 130 aa5.96□□□□□ -1.45
VPS50-208ENST00000458707 IGHV3OR16-9A0A0B4J2B5 98 aa5.96□□□□□ -1.45
VPS50-208ENST00000458707 TRBV6-4A0A1B0GX49 114 aa5.96□□□□□ -1.45
VPS50-208ENST00000458707 PLAC8L1A1L4L8 177 aa5.96□□□□□ -1.45
VPS50-208ENST00000458707 IBA57-AS1B1ANH7 110 aa5.96□□□□□ -1.45
VPS50-208ENST00000458707 CCL18P55774 89 aa5.96□□□□□ -1.45
VPS50-208ENST00000458707 LINC00482Q8N8I6 264 aa5.96□□□□□ -1.45
VPS50-208ENST00000458707 LAMTOR3Q9UHA4 124 aa5.96□□□□□ -1.45
VPS50-208ENST00000458707 WNK1Q9H4A3 2382 aa5.96□□□□□ -1.46
VPS50-208ENST00000458707 DNAL4O96015 105 aa5.96□□□□□ -1.46
VPS50-208ENST00000458707 Q6ZRU5 148 aa5.96□□□□□ -1.46
VPS50-208ENST00000458707 RETNQ9HD89 108 aa5.96□□□□□ -1.46
VPS50-208ENST00000458707 A0A087WZ39 114 aa5.95□□□□□ -1.46
VPS50-208ENST00000458707 KHDC1LQ5JSQ8 128 aa5.95□□□□□ -1.46
VPS50-208ENST00000458707 Q6JHZ5 121 aa5.95□□□□□ -1.46
VPS50-208ENST00000458707 C16orf74Q96GX8 76 aa5.95□□□□□ -1.46
VPS50-208ENST00000458707 NOP10Q9NPE3 64 aaKnown RBP5.95□□□□□ -1.46
VPS50-208ENST00000458707 AKAP9Q99996 3911 aa5.95□□□□□ -1.46
VPS50-208ENST00000458707 LY6G6DO95868 133 aa5.94□□□□□ -1.46
VPS50-208ENST00000458707 GIG44P09565 113 aaPredicted RBP5.94□□□□□ -1.46
VPS50-208ENST00000458707 LINC00158P58513 81 aa5.94□□□□□ -1.46
VPS50-208ENST00000458707 C9orf129Q5T035 196 aaKnown RBP5.94□□□□□ -1.46
VPS50-208ENST00000458707 FP248Q71RG6 208 aaPredicted RBP5.94□□□□□ -1.46
VPS50-208ENST00000458707 MTORP42345 2549 aa5.94□□□□□ -1.46
VPS50-208ENST00000458707 NOTCH3Q9UM47 2321 aa5.94□□□□□ -1.46
VPS50-208ENST00000458707 IGLV4-60A0A075B6I1 120 aa5.93□□□□□ -1.46
VPS50-208ENST00000458707 TRBV6-8A0A0A6YYG3 113 aa5.93□□□□□ -1.46
VPS50-208ENST00000458707 LOC100131303A0A0U1RQF7 123 aa5.93□□□□□ -1.46
VPS50-208ENST00000458707 GHRHP01286 108 aa5.93□□□□□ -1.46
VPS50-208ENST00000458707 CMC4P56277 68 aaPredicted RBP5.93□□□□□ -1.46
VPS50-208ENST00000458707 PRR15Q8IV56 129 aa5.93□□□□□ -1.46
VPS50-208ENST00000458707 C14orf132Q9NPU4 83 aa5.93□□□□□ -1.46
VPS50-208ENST00000458707 TOMM7Q9P0U1 55 aa5.93□□□□□ -1.46
VPS50-208ENST00000458707 CSMD2Q7Z408 3487 aa5.92□□□□□ -1.46
VPS50-208ENST00000458707 LINC00167Q96N53 147 aa5.92□□□□□ -1.46
VPS50-208ENST00000458707 TRGV2A0A075B6R0 118 aa5.92□□□□□ -1.46
VPS50-208ENST00000458707 A0A0U1RQV1 116 aa5.92□□□□□ -1.46
VPS50-208ENST00000458707 LECT2O14960 151 aa5.92□□□□□ -1.46
VPS50-208ENST00000458707 SS18Q15532 418 aa5.92□□□□□ -1.46
VPS50-208ENST00000458707 WFDC11Q8NEX6 87 aa5.92□□□□□ -1.46
VPS50-208ENST00000458707 BRK1Q8WUW1 75 aa5.92□□□□□ -1.46
VPS50-208ENST00000458707 KRTAP9-8Q9BYQ0 159 aa5.92□□□□□ -1.46
VPS50-208ENST00000458707 LINC00846Q9NV44 126 aa5.92□□□□□ -1.46
VPS50-208ENST00000458707 HILS1P60008 231 aa5.91□□□□□ -1.46
VPS50-208ENST00000458707 FHL2Q14192 279 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms