RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 ADCY10Q96PN6 1610 aa2.11□□□□□ -2.07
HMGB3P30-201ENST00000457863 ALPK2Q86TB3 2170 aa2.11□□□□□ -2.07
HMGB3P30-201ENST00000457863 SHANK1Q9Y566 2161 aa2.11□□□□□ -2.07
HMGB3P30-201ENST00000457863 IGKV2-29A2NJV5 120 aaPredicted RBP2.11□□□□□ -2.07
HMGB3P30-201ENST00000457863 IGLV6-57P01721 117 aa2.11□□□□□ -2.07
HMGB3P30-201ENST00000457863 IL9P15248 144 aa2.11□□□□□ -2.07
HMGB3P30-201ENST00000457863 HMGA1P17096 107 aaKnown RBP2.11□□□□□ -2.07
HMGB3P30-201ENST00000457863 ZNF137PP52743 207 aa2.11□□□□□ -2.07
HMGB3P30-201ENST00000457863 C5orf56Q8N8D9 126 aa2.11□□□□□ -2.07
HMGB3P30-201ENST00000457863 LINC00846Q9NV44 126 aa2.11□□□□□ -2.07
HMGB3P30-201ENST00000457863 SDK1Q7Z5N4 2213 aa2.11□□□□□ -2.07
HMGB3P30-201ENST00000457863 NCOA6Q14686 2063 aaPredicted RBP2.11□□□□□ -2.07
HMGB3P30-201ENST00000457863 DOT1LQ8TEK3 1739 aa2.11□□□□□ -2.07
HMGB3P30-201ENST00000457863 H3BRN7 92 aa2.1□□□□□ -2.07
HMGB3P30-201ENST00000457863 MGPP08493 103 aa2.1□□□□□ -2.07
HMGB3P30-201ENST00000457863 KRTAP1-4P0C5Y4 121 aa2.1□□□□□ -2.07
HMGB3P30-201ENST00000457863 KRTAP13-2Q52LG2 175 aa2.1□□□□□ -2.07
HMGB3P30-201ENST00000457863 GDF5OSQ5U4N7 250 aa2.1□□□□□ -2.07
HMGB3P30-201ENST00000457863 LINC00304Q8N9R0 145 aa2.1□□□□□ -2.07
HMGB3P30-201ENST00000457863 SPRR4Q96PI1 79 aa2.1□□□□□ -2.07
HMGB3P30-201ENST00000457863 WFDC6Q9BQY6 131 aa2.1□□□□□ -2.07
HMGB3P30-201ENST00000457863 TMEM14CQ9P0S9 112 aa2.1□□□□□ -2.07
HMGB3P30-201ENST00000457863 INTS1Q8N201 2190 aaKnown RBP2.1□□□□□ -2.07
HMGB3P30-201ENST00000457863 ZMYM4Q5VZL5 1548 aa2.1□□□□□ -2.07
HMGB3P30-201ENST00000457863 FAM208AQ9UK61 1670 aaKnown RBP2.09□□□□□ -2.07
HMGB3P30-201ENST00000457863 AGLP35573 1532 aa2.09□□□□□ -2.07
HMGB3P30-201ENST00000457863 EFCAB6Q5THR3 1501 aa2.09□□□□□ -2.07
HMGB3P30-201ENST00000457863 LOC110117498A0A087WWA1 95 aa2.09□□□□□ -2.07
HMGB3P30-201ENST00000457863 CTXND1A0A1B0GTU2 59 aa2.09□□□□□ -2.07
HMGB3P30-201ENST00000457863 A0A1B0GUT8 65 aa2.09□□□□□ -2.07
HMGB3P30-201ENST00000457863 INE1O15225 51 aa2.09□□□□□ -2.07
HMGB3P30-201ENST00000457863 LINC00322Q6ZN03 302 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P30-201ENST00000457863 ANAPC11Q9NYG5 84 aa2.09□□□□□ -2.07
HMGB3P30-201ENST00000457863 FREM1Q5H8C1 2179 aa2.09□□□□□ -2.08
HMGB3P30-201ENST00000457863 DDX60LQ5H9U9 1706 aaKnown RBP2.08□□□□□ -2.08
HMGB3P30-201ENST00000457863 FN1P02751 2386 aaKnown RBP2.08□□□□□ -2.08
HMGB3P30-201ENST00000457863 TRGV4A0A0C4DH28 118 aa2.08□□□□□ -2.08
HMGB3P30-201ENST00000457863 PRR9Q5T870 116 aa2.08□□□□□ -2.08
HMGB3P30-201ENST00000457863 DEFB107AQ8IZN7 70 aa2.08□□□□□ -2.08
HMGB3P30-201ENST00000457863 ZFHX3Q15911 3703 aa2.07□□□□□ -2.08
HMGB3P30-201ENST00000457863 IGKV2-28A0A075B6P5 120 aa2.07□□□□□ -2.08
HMGB3P30-201ENST00000457863 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.07□□□□□ -2.08
HMGB3P30-201ENST00000457863 LINC01549A6NIU2 74 aa2.07□□□□□ -2.08
HMGB3P30-201ENST00000457863 H0Y9P7 68 aa2.07□□□□□ -2.08
HMGB3P30-201ENST00000457863 HCRTO43612 131 aa2.07□□□□□ -2.08
HMGB3P30-201ENST00000457863 IGKV2D-28P01615 120 aa2.07□□□□□ -2.08
HMGB3P30-201ENST00000457863 KRTAP5-5Q701N2 237 aaPredicted RBP2.07□□□□□ -2.08
HMGB3P30-201ENST00000457863 Q96NJ1 140 aa2.07□□□□□ -2.08
HMGB3P30-201ENST00000457863 KMT2BQ9UMN6 2715 aaPredicted RBP2.07□□□□□ -2.08
HMGB3P30-201ENST00000457863 SLIT1O75093 1534 aa2.07□□□□□ -2.08
HMGB3P30-201ENST00000457863 TRPM2O94759 1503 aa2.07□□□□□ -2.08
HMGB3P30-201ENST00000457863 ABCC8Q09428 1581 aa2.06□□□□□ -2.08
HMGB3P30-201ENST00000457863 NWD1Q149M9 1564 aa2.06□□□□□ -2.08
HMGB3P30-201ENST00000457863 KIF21BO75037 1637 aa2.06□□□□□ -2.08
HMGB3P30-201ENST00000457863 MED13LQ71F56 2210 aa2.06□□□□□ -2.08
HMGB3P30-201ENST00000457863 M0R2N4 97 aa2.06□□□□□ -2.08
HMGB3P30-201ENST00000457863 IFI6P09912 130 aa2.06□□□□□ -2.08
HMGB3P30-201ENST00000457863 SPINK7P58062 85 aa2.06□□□□□ -2.08
HMGB3P30-201ENST00000457863 COX17Q14061 63 aa2.06□□□□□ -2.08
HMGB3P30-201ENST00000457863 TMEM263Q8WUH6 116 aaKnown RBP2.06□□□□□ -2.08
HMGB3P30-201ENST00000457863 ZNF625Q96I27 306 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P30-201ENST00000457863 TRAV1-2A0A0B4J238 106 aa2.05□□□□□ -2.08
HMGB3P30-201ENST00000457863 J3QRE1 110 aa2.05□□□□□ -2.08
HMGB3P30-201ENST00000457863 NDUFB1O75438 58 aa2.05□□□□□ -2.08
HMGB3P30-201ENST00000457863 IGKV4-1P06312 121 aa2.05□□□□□ -2.08
HMGB3P30-201ENST00000457863 NREPQ16612 68 aa2.05□□□□□ -2.08
HMGB3P30-201ENST00000457863 SPATA8Q6RVD6 105 aa2.05□□□□□ -2.08
HMGB3P30-201ENST00000457863 LINC00208Q96KT6 92 aa2.05□□□□□ -2.08
HMGB3P30-201ENST00000457863 LRRC37A2A6NM11 1700 aa2.05□□□□□ -2.08
HMGB3P30-201ENST00000457863 CACNA1CQ13936 2221 aa2.05□□□□□ -2.08
HMGB3P30-201ENST00000457863 TRBV30A0A0K0K1B3 111 aa2.04□□□□□ -2.08
HMGB3P30-201ENST00000457863 LCE6AA0A183 80 aa2.04□□□□□ -2.08
HMGB3P30-201ENST00000457863 FXYD4P59646 89 aa2.04□□□□□ -2.08
HMGB3P30-201ENST00000457863 NCBP2-AS2Q69YL0 99 aa2.04□□□□□ -2.08
HMGB3P30-201ENST00000457863 COA5Q86WW8 74 aa2.04□□□□□ -2.08
HMGB3P30-201ENST00000457863 TXNDC17Q9BRA2 123 aa2.04□□□□□ -2.08
HMGB3P30-201ENST00000457863 LINC00472Q9H8W2 130 aa2.04□□□□□ -2.08
HMGB3P30-201ENST00000457863 NFAT5O94916 1531 aa2.03□□□□□ -2.08
HMGB3P30-201ENST00000457863 TRGV2A0A075B6R0 118 aa2.03□□□□□ -2.08
HMGB3P30-201ENST00000457863 TRGV1A0A0A0MS02 117 aa2.03□□□□□ -2.08
HMGB3P30-201ENST00000457863 IGKV2-24A0A0C4DH68 120 aa2.03□□□□□ -2.08
HMGB3P30-201ENST00000457863 SMIM4Q8WVI0 70 aa2.03□□□□□ -2.08
HMGB3P30-201ENST00000457863 TRAV21A0A0B4J279 112 aa2.02□□□□□ -2.09
HMGB3P30-201ENST00000457863 Q6ZRN7 208 aaPredicted RBP2.02□□□□□ -2.09
HMGB3P30-201ENST00000457863 TOMM5Q8N4H5 51 aa2.02□□□□□ -2.09
HMGB3P30-201ENST00000457863 QSER1Q2KHR3 1735 aa2.02□□□□□ -2.09
HMGB3P30-201ENST00000457863 MROH2BQ7Z745 1585 aa2.02□□□□□ -2.09
HMGB3P30-201ENST00000457863 C10orf113Q5VZT2 155 aa2.01□□□□□ -2.09
HMGB3P30-201ENST00000457863 ZCCHC13Q8WW36 166 aaKnown RBP2.01□□□□□ -2.09
HMGB3P30-201ENST00000457863 ACYP2P14621 99 aa2□□□□□ -2.09
HMGB3P30-201ENST00000457863 TRBV6-1A0A0K0K1D8 114 aa1.99□□□□□ -2.09
HMGB3P30-201ENST00000457863 CAV3P56539 151 aa1.99□□□□□ -2.09
HMGB3P30-201ENST00000457863 IGFL1Q6UW32 110 aa1.99□□□□□ -2.09
HMGB3P30-201ENST00000457863 NMES1Q9C002 83 aa1.99□□□□□ -2.09
HMGB3P30-201ENST00000457863 E9PCH4 1651 aa1.99□□□□□ -2.09
HMGB3P30-201ENST00000457863 ABCA1O95477 2261 aa1.98□□□□□ -2.09
HMGB3P30-201ENST00000457863 F5P12259 2224 aa1.98□□□□□ -2.09
HMGB3P30-201ENST00000457863 WFDC9Q8NEX5 89 aa1.98□□□□□ -2.09
HMGB3P30-201ENST00000457863 CMC2Q9NRP2 79 aa1.98□□□□□ -2.09
HMGB3P30-201ENST00000457863 A0A0G2JMZ2 1700 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms