RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 LYRM9A8MSI8 78 aa12.77□□□□□ -0.37
SEMA3B-209ENST00000456560 FAM222AQ5U5X8 452 aa12.77□□□□□ -0.37
SEMA3B-209ENST00000456560 A0A1B0GUV1 79 aa12.76□□□□□ -0.37
SEMA3B-209ENST00000456560 TOMM7Q9P0U1 55 aa12.76□□□□□ -0.37
SEMA3B-209ENST00000456560 TRBV7-7A0A0K0K1E9 115 aa12.76□□□□□ -0.37
SEMA3B-209ENST00000456560 ACYP1P07311 99 aa12.75□□□□□ -0.37
SEMA3B-209ENST00000456560 C5orf38Q86SI9 138 aa12.74□□□□□ -0.37
SEMA3B-209ENST00000456560 MIR7-3HGQ8N6C7 128 aa12.73□□□□□ -0.37
SEMA3B-209ENST00000456560 FBN1P35555 2871 aaKnown RBP12.73□□□□□ -0.37
SEMA3B-209ENST00000456560 DEFB135Q30KP9 77 aa12.73□□□□□ -0.37
SEMA3B-209ENST00000456560 PAX4O43316 350 aa12.72□□□□□ -0.37
SEMA3B-209ENST00000456560 APOC4P55056 127 aa12.72□□□□□ -0.37
SEMA3B-209ENST00000456560 TRACP01848 142 aa12.71□□□□□ -0.37
SEMA3B-209ENST00000456560 IBA57-AS1B1ANH7 110 aa12.7□□□□□ -0.38
SEMA3B-209ENST00000456560 BAALC-AS2P0C853 105 aa12.7□□□□□ -0.38
SEMA3B-209ENST00000456560 A0A096LPF7 62 aa12.7□□□□□ -0.38
SEMA3B-209ENST00000456560 IGHV4-28A0A0C4DH34 117 aa12.7□□□□□ -0.38
SEMA3B-209ENST00000456560 DEFB4AO15263 64 aa12.7□□□□□ -0.38
SEMA3B-209ENST00000456560 LINC00158P58513 81 aa12.69□□□□□ -0.38
SEMA3B-209ENST00000456560 SS18Q15532 418 aa12.69□□□□□ -0.38
SEMA3B-209ENST00000456560 TRAV13-2A0A0B4J235 113 aa12.69□□□□□ -0.38
SEMA3B-209ENST00000456560 IGKV2-28A0A075B6P5 120 aa12.68□□□□□ -0.38
SEMA3B-209ENST00000456560 IGKV2D-28P01615 120 aa12.68□□□□□ -0.38
SEMA3B-209ENST00000456560 SMCR5Q8TEV8 140 aa12.68□□□□□ -0.38
SEMA3B-209ENST00000456560 SND1-IT1Q9HBX3 110 aa12.68□□□□□ -0.38
SEMA3B-209ENST00000456560 XCL1P47992 114 aa12.68□□□□□ -0.38
SEMA3B-209ENST00000456560 CCL18P55774 89 aa12.68□□□□□ -0.38
SEMA3B-209ENST00000456560 KRTAP24-1Q3LI83 254 aa12.68□□□□□ -0.38
SEMA3B-209ENST00000456560 LINC00337Q8N6G1 96 aa12.68□□□□□ -0.38
SEMA3B-209ENST00000456560 FAM218AQ96MZ4 157 aa12.68□□□□□ -0.38
SEMA3B-209ENST00000456560 IMUPQ9GZP8 106 aa12.68□□□□□ -0.38
SEMA3B-209ENST00000456560 VWFP04275 2813 aa12.67□□□□□ -0.38
SEMA3B-209ENST00000456560 FAM236AA0A1B0GUQ0 79 aa12.67□□□□□ -0.38
SEMA3B-209ENST00000456560 FAM236BA0A1B0GV22 79 aa12.67□□□□□ -0.38
SEMA3B-209ENST00000456560 LINC01561Q8N1V8 128 aa12.67□□□□□ -0.38
SEMA3B-209ENST00000456560 LINC00643Q86TS7 51 aa12.66□□□□□ -0.38
SEMA3B-209ENST00000456560 Q8NAQ8 132 aa12.66□□□□□ -0.38
SEMA3B-209ENST00000456560 RPL28P46779 137 aaKnown RBP12.66□□□□□ -0.38
SEMA3B-209ENST00000456560 WFDC9Q8NEX5 89 aa12.66□□□□□ -0.38
SEMA3B-209ENST00000456560 DAD1P61803 113 aa12.65□□□□□ -0.38
SEMA3B-209ENST00000456560 C6orf226Q5I0X4 101 aa12.65□□□□□ -0.38
SEMA3B-209ENST00000456560 CRPP02741 224 aa12.65□□□□□ -0.38
SEMA3B-209ENST00000456560 MIFP14174 115 aa12.65□□□□□ -0.38
SEMA3B-209ENST00000456560 Q8IZM0 81 aa12.65□□□□□ -0.38
SEMA3B-209ENST00000456560 CELA1Q9UNI1 258 aa12.65□□□□□ -0.38
SEMA3B-209ENST00000456560 CLPSL2Q6UWE3 100 aa12.64□□□□□ -0.39
SEMA3B-209ENST00000456560 C22orf24Q9Y442 160 aa12.64□□□□□ -0.39
SEMA3B-209ENST00000456560 PFN2P35080 140 aa12.64□□□□□ -0.39
SEMA3B-209ENST00000456560 SMIM20Q8N5G0 67 aa12.64□□□□□ -0.39
SEMA3B-209ENST00000456560 TRRAPQ9Y4A5 3859 aa12.63□□□□□ -0.39
SEMA3B-209ENST00000456560 WIPF1O43516 503 aa12.63□□□□□ -0.39
SEMA3B-209ENST00000456560 Q9HAA7 133 aa12.63□□□□□ -0.39
SEMA3B-209ENST00000456560 ATP5G1P05496 136 aa12.62□□□□□ -0.39
SEMA3B-209ENST00000456560 INAFM2P0DMQ5 153 aa12.62□□□□□ -0.39
SEMA3B-209ENST00000456560 LINC00269Q8N2A0 174 aa12.62□□□□□ -0.39
SEMA3B-209ENST00000456560 NBEAL2Q6ZNJ1 2754 aa12.62□□□□□ -0.39
SEMA3B-209ENST00000456560 C3orf56Q8N813 242 aa12.61□□□□□ -0.39
SEMA3B-209ENST00000456560 MALP21145 153 aa12.61□□□□□ -0.39
SEMA3B-209ENST00000456560 GAGE2AQ6NT46 116 aa12.61□□□□□ -0.39
SEMA3B-209ENST00000456560 CD164L2Q6UWJ8 174 aa12.61□□□□□ -0.39
SEMA3B-209ENST00000456560 Q8N3U1 123 aa12.6□□□□□ -0.39
SEMA3B-209ENST00000456560 C11orf68Q9H3H3 251 aaKnown RBP12.6□□□□□ -0.39
SEMA3B-209ENST00000456560 STAB1Q9NY15 2570 aa12.6□□□□□ -0.39
SEMA3B-209ENST00000456560 SDIM1Q6ZPB5 146 aa12.6□□□□□ -0.39
SEMA3B-209ENST00000456560 SPART-AS1P0CW21 52 aa12.59□□□□□ -0.39
SEMA3B-209ENST00000456560 KIAA0087Q14695 138 aa12.59□□□□□ -0.39
SEMA3B-209ENST00000456560 SMIM11BQ8TCY0 68 aa12.59□□□□□ -0.39
SEMA3B-209ENST00000456560 IGHV4-30-4P0DP06 118 aa12.58□□□□□ -0.39
SEMA3B-209ENST00000456560 CHCHD10Q8WYQ3 142 aaPredicted RBP12.58□□□□□ -0.39
SEMA3B-209ENST00000456560 REG3AQ06141 175 aa12.58□□□□□ -0.4
SEMA3B-209ENST00000456560 COL6A5A8TX70 2615 aa12.58□□□□□ -0.4
SEMA3B-209ENST00000456560 TMEM126AQ9H061 195 aa12.57□□□□□ -0.4
SEMA3B-209ENST00000456560 ANGP03950 147 aaKnown RBP12.57□□□□□ -0.4
SEMA3B-209ENST00000456560 DNAL4O96015 105 aa12.56□□□□□ -0.4
SEMA3B-209ENST00000456560 A0A087WYN8 130 aa12.55□□□□□ -0.4
SEMA3B-209ENST00000456560 CXCL5P42830 114 aa12.55□□□□□ -0.4
SEMA3B-209ENST00000456560 LELP1Q5T871 98 aa12.54□□□□□ -0.4
SEMA3B-209ENST00000456560 IGLV10-54A0A075B6I4 117 aa12.53□□□□□ -0.4
SEMA3B-209ENST00000456560 C9orf153Q5TBE3 101 aa12.53□□□□□ -0.4
SEMA3B-209ENST00000456560 C3orf22Q8N5N4 141 aa12.53□□□□□ -0.4
SEMA3B-209ENST00000456560 H0YGX0 51 aa12.53□□□□□ -0.4
SEMA3B-209ENST00000456560 HTN3P15516 51 aa12.53□□□□□ -0.4
SEMA3B-209ENST00000456560 COX17Q14061 63 aa12.51□□□□□ -0.41
SEMA3B-209ENST00000456560 UQCRQO14949 82 aa12.5□□□□□ -0.41
SEMA3B-209ENST00000456560 C14orf132Q9NPU4 83 aa12.5□□□□□ -0.41
SEMA3B-209ENST00000456560 C9orf129Q5T035 196 aaKnown RBP12.49□□□□□ -0.41
SEMA3B-209ENST00000456560 OR13C6PQ8NH95 151 aa12.49□□□□□ -0.41
SEMA3B-209ENST00000456560 PRR34Q9NV39 138 aa12.48□□□□□ -0.41
SEMA3B-209ENST00000456560 KLK5Q9Y337 293 aaPredicted RBP12.48□□□□□ -0.41
SEMA3B-209ENST00000456560 LECT2O14960 151 aa12.47□□□□□ -0.41
SEMA3B-209ENST00000456560 LINC00526Q96FQ7 95 aa12.47□□□□□ -0.41
SEMA3B-209ENST00000456560 NDUFC2O95298 119 aa12.47□□□□□ -0.41
SEMA3B-209ENST00000456560 LYPD5Q6UWN5 251 aa12.46□□□□□ -0.42
SEMA3B-209ENST00000456560 NANOS2P60321 138 aaKnown RBP12.45□□□□□ -0.42
SEMA3B-209ENST00000456560 C9orf116Q5BN46 136 aaPredicted RBP12.45□□□□□ -0.42
SEMA3B-209ENST00000456560 KRTAP10-11P60412 298 aa12.45□□□□□ -0.42
SEMA3B-209ENST00000456560 PRR3P79522 188 aaKnown RBP12.45□□□□□ -0.42
SEMA3B-209ENST00000456560 COX7CP15954 63 aa12.44□□□□□ -0.42
SEMA3B-209ENST00000456560 OXLD1Q5BKU9 147 aa12.44□□□□□ -0.42
SEMA3B-209ENST00000456560 ENHOQ6UWT2 76 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms