RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 MUC2Q02817 5179 aa11.25□□□□□ -0.61
COL20A1-204ENST00000455906 PRSS47A8MTI9 375 aa11.25□□□□□ -0.61
COL20A1-204ENST00000455906 NDUFC2-KCTD14E9PQ53 114 aa11.25□□□□□ -0.61
COL20A1-204ENST00000455906 Q8N8P6 123 aa11.25□□□□□ -0.61
COL20A1-204ENST00000455906 TMEM141Q96I45 108 aa11.25□□□□□ -0.61
COL20A1-204ENST00000455906 NXT2Q9NPJ8 142 aaKnown RBP11.25□□□□□ -0.61
COL20A1-204ENST00000455906 UBE2D1P51668 147 aa11.24□□□□□ -0.61
COL20A1-204ENST00000455906 UBE2BP63146 152 aa11.24□□□□□ -0.61
COL20A1-204ENST00000455906 FA2HQ7L5A8 372 aa11.23□□□□□ -0.61
COL20A1-204ENST00000455906 LINC01561Q8N1V8 128 aa11.23□□□□□ -0.61
COL20A1-204ENST00000455906 RAB5BP61020 215 aa11.22□□□□□ -0.61
COL20A1-204ENST00000455906 ZC2HC1BQ5TFG8 222 aa11.22□□□□□ -0.61
COL20A1-204ENST00000455906 TEX43Q6ZNM6 134 aa11.22□□□□□ -0.61
COL20A1-204ENST00000455906 LINC00173Q6ZV60 143 aa11.22□□□□□ -0.61
COL20A1-204ENST00000455906 C18orf32Q8TCD1 76 aa11.22□□□□□ -0.61
COL20A1-204ENST00000455906 PACRGQ96M98 296 aaPredicted RBP11.22□□□□□ -0.61
COL20A1-204ENST00000455906 K7EMI3 77 aa11.2□□□□□ -0.62
COL20A1-204ENST00000455906 ORMDL2Q53FV1 153 aa11.2□□□□□ -0.62
COL20A1-204ENST00000455906 BAGE3Q86Y29 109 aa11.2□□□□□ -0.62
COL20A1-204ENST00000455906 AMELXQ99217 191 aa11.19□□□□□ -0.62
COL20A1-204ENST00000455906 LINC00614P0C842 121 aa11.18□□□□□ -0.62
COL20A1-204ENST00000455906 G0S2P27469 103 aa11.18□□□□□ -0.62
COL20A1-204ENST00000455906 C2orf66Q6UXQ4 117 aa11.18□□□□□ -0.62
COL20A1-204ENST00000455906 C2orf88Q9BSF0 95 aa11.18□□□□□ -0.62
COL20A1-204ENST00000455906 CYSLTR1Q9Y271 337 aa11.18□□□□□ -0.62
COL20A1-204ENST00000455906 RPL13AP40429 203 aaKnown RBP11.17□□□□□ -0.62
COL20A1-204ENST00000455906 Q6ZN92 141 aa11.17□□□□□ -0.62
COL20A1-204ENST00000455906 FAM19A3Q7Z5A8 133 aa11.17□□□□□ -0.62
COL20A1-204ENST00000455906 ZNF861PO60384 105 aa11.16□□□□□ -0.62
COL20A1-204ENST00000455906 IGIPA6NJ69 53 aa11.15□□□□□ -0.62
COL20A1-204ENST00000455906 Q8IZM0 81 aa11.15□□□□□ -0.62
COL20A1-204ENST00000455906 LINC00469Q8N7U9 141 aa11.15□□□□□ -0.62
COL20A1-204ENST00000455906 VCX2Q9H322 139 aa11.15□□□□□ -0.62
COL20A1-204ENST00000455906 TOMM7Q9P0U1 55 aa11.15□□□□□ -0.62
COL20A1-204ENST00000455906 C22orf24Q9Y442 160 aa11.15□□□□□ -0.62
COL20A1-204ENST00000455906 HIST1H2BKO60814 126 aa11.14□□□□□ -0.63
COL20A1-204ENST00000455906 HIST1H2BJP06899 126 aa11.14□□□□□ -0.63
COL20A1-204ENST00000455906 PRSS2P07478 247 aa11.14□□□□□ -0.63
COL20A1-204ENST00000455906 NPSP0C0P6 89 aa11.14□□□□□ -0.63
COL20A1-204ENST00000455906 HIST1H2BOP23527 126 aa11.14□□□□□ -0.63
COL20A1-204ENST00000455906 HIST1H2BBP33778 126 aa11.14□□□□□ -0.63
COL20A1-204ENST00000455906 HIST1H2BDP58876 126 aa11.14□□□□□ -0.63
COL20A1-204ENST00000455906 CKS1BP61024 79 aa11.14□□□□□ -0.63
COL20A1-204ENST00000455906 HIST1H2BCP62807 126 aa11.14□□□□□ -0.63
COL20A1-204ENST00000455906 PRR4Q16378 134 aa11.14□□□□□ -0.63
COL20A1-204ENST00000455906 HIST2H2BEQ16778 126 aa11.14□□□□□ -0.63
COL20A1-204ENST00000455906 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.14□□□□□ -0.63
COL20A1-204ENST00000455906 HIST1H2BHQ93079 126 aa11.14□□□□□ -0.63
COL20A1-204ENST00000455906 CHCHD1Q96BP2 118 aaKnown RBP11.14□□□□□ -0.63
COL20A1-204ENST00000455906 HIST1H2BNQ99877 126 aa11.14□□□□□ -0.63
COL20A1-204ENST00000455906 HIST1H2BMQ99879 126 aa11.14□□□□□ -0.63
COL20A1-204ENST00000455906 LINC01546A6NGU7 62 aa11.13□□□□□ -0.63
COL20A1-204ENST00000455906 C6orf226Q5I0X4 101 aa11.13□□□□□ -0.63
COL20A1-204ENST00000455906 XAGE1AQ9HD64 81 aa11.13□□□□□ -0.63
COL20A1-204ENST00000455906 NUPR1O60356 82 aa11.12□□□□□ -0.63
COL20A1-204ENST00000455906 HSBP1O75506 76 aa11.12□□□□□ -0.63
COL20A1-204ENST00000455906 URB1-AS1Q96HZ7 61 aa11.11□□□□□ -0.63
COL20A1-204ENST00000455906 CDKN2A-AS1Q9UH64 79 aa11.11□□□□□ -0.63
COL20A1-204ENST00000455906 LINC01549A6NIU2 74 aa11.1□□□□□ -0.63
COL20A1-204ENST00000455906 SERF1AO75920 110 aa11.1□□□□□ -0.63
COL20A1-204ENST00000455906 NDUFA6P56556 154 aa11.1□□□□□ -0.63
COL20A1-204ENST00000455906 HBDP02042 147 aa11.09□□□□□ -0.63
COL20A1-204ENST00000455906 HERVK_113P63121 156 aa11.09□□□□□ -0.63
COL20A1-204ENST00000455906 PMCHL1Q16048 86 aa11.09□□□□□ -0.63
COL20A1-204ENST00000455906 LBHQ53QV2 105 aaPredicted RBP11.09□□□□□ -0.63
COL20A1-204ENST00000455906 TOMM6Q96B49 74 aa11.09□□□□□ -0.63
COL20A1-204ENST00000455906 F8VRH5 84 aa11.08□□□□□ -0.64
COL20A1-204ENST00000455906 SCGB3A1Q96QR1 104 aa11.08□□□□□ -0.64
COL20A1-204ENST00000455906 TP73-AS1Q9UF72 201 aa11.08□□□□□ -0.64
COL20A1-204ENST00000455906 SEC11AP67812 179 aa11.07□□□□□ -0.64
COL20A1-204ENST00000455906 MRPL55Q7Z7F7 128 aaKnown RBP11.07□□□□□ -0.64
COL20A1-204ENST00000455906 A0A087X002 238 aa11.06□□□□□ -0.64
COL20A1-204ENST00000455906 S100A6P06703 90 aa11.06□□□□□ -0.64
COL20A1-204ENST00000455906 FAM19A2Q8N3H0 131 aa11.06□□□□□ -0.64
COL20A1-204ENST00000455906 TIMM17AQ99595 171 aa11.06□□□□□ -0.64
COL20A1-204ENST00000455906 BCE1O60756 84 aa11.05□□□□□ -0.64
COL20A1-204ENST00000455906 PAPPA-AS1Q5QFB9 102 aa11.05□□□□□ -0.64
COL20A1-204ENST00000455906 ERASQ7Z444 233 aa11.05□□□□□ -0.64
COL20A1-204ENST00000455906 GEMIN7Q9H840 131 aaKnown RBP11.05□□□□□ -0.64
COL20A1-204ENST00000455906 TSPAN13O95857 204 aa11.04□□□□□ -0.64
COL20A1-204ENST00000455906 CXCL5P42830 114 aa11.04□□□□□ -0.64
COL20A1-204ENST00000455906 SMIM1B2RUZ4 78 aa11.03□□□□□ -0.64
COL20A1-204ENST00000455906 RPL28P46779 137 aaKnown RBP11.03□□□□□ -0.64
COL20A1-204ENST00000455906 LINC00310P59036 64 aa11.03□□□□□ -0.64
COL20A1-204ENST00000455906 A0A096LNJ9 63 aa11.02□□□□□ -0.65
COL20A1-204ENST00000455906 ATP5LO75964 103 aa11.02□□□□□ -0.65
COL20A1-204ENST00000455906 LINC00167Q96N53 147 aa11.02□□□□□ -0.65
COL20A1-204ENST00000455906 LEPROTL1O95214 131 aa11.01□□□□□ -0.65
COL20A1-204ENST00000455906 PDZD11Q5EBL8 140 aa11.01□□□□□ -0.65
COL20A1-204ENST00000455906 COA6Q5JTJ3 125 aaKnown RBP11.01□□□□□ -0.65
COL20A1-204ENST00000455906 IGLV5-45A0A087WSX0 123 aa11□□□□□ -0.65
COL20A1-204ENST00000455906 RPL37AP8A6NKH3 93 aa11□□□□□ -0.65
COL20A1-204ENST00000455906 FABP4P15090 132 aa11□□□□□ -0.65
COL20A1-204ENST00000455906 HSPB8Q9UJY1 196 aa11□□□□□ -0.65
COL20A1-204ENST00000455906 TINCRA0A1B0GVN0 87 aa10.99□□□□□ -0.65
COL20A1-204ENST00000455906 CRYGAP11844 174 aa10.99□□□□□ -0.65
COL20A1-204ENST00000455906 TYMSOSQ8TAI1 123 aa10.99□□□□□ -0.65
COL20A1-204ENST00000455906 COX7B2Q8TF08 81 aa10.99□□□□□ -0.65
COL20A1-204ENST00000455906 FAT4Q6V0I7 4981 aa10.99□□□□□ -0.65
COL20A1-204ENST00000455906 MUC17Q685J3 4493 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms