RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 PRO1854Q9UHT4 67 aa4.64□□□□□ -1.67
ECHDC1-210ENST00000454859 A0A1B0GV90 55 aa4.63□□□□□ -1.67
ECHDC1-210ENST00000454859 FABP2P12104 132 aa4.63□□□□□ -1.67
ECHDC1-210ENST00000454859 ENHOQ6UWT2 76 aa4.63□□□□□ -1.67
ECHDC1-210ENST00000454859 C2orf48Q96LS8 159 aa4.63□□□□□ -1.67
ECHDC1-210ENST00000454859 NHP2Q9NX24 153 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-210ENST00000454859 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-210ENST00000454859 XCL1P47992 114 aa4.63□□□□□ -1.67
ECHDC1-210ENST00000454859 CKS1BP61024 79 aa4.63□□□□□ -1.67
ECHDC1-210ENST00000454859 KRTAP9-2Q9BYQ4 174 aa4.63□□□□□ -1.67
ECHDC1-210ENST00000454859 KLK12Q9UKR0 248 aa4.63□□□□□ -1.67
ECHDC1-210ENST00000454859 NBEAL2Q6ZNJ1 2754 aa4.63□□□□□ -1.67
ECHDC1-210ENST00000454859 TRBV20-1A0A075B6N2 111 aa4.62□□□□□ -1.67
ECHDC1-210ENST00000454859 A0A1W2PPM0 123 aa4.62□□□□□ -1.67
ECHDC1-210ENST00000454859 UBE2V1Q13404 147 aa4.62□□□□□ -1.67
ECHDC1-210ENST00000454859 KIAA0087Q14695 138 aa4.62□□□□□ -1.67
ECHDC1-210ENST00000454859 MUSTN1Q8IVN3 82 aa4.62□□□□□ -1.67
ECHDC1-210ENST00000454859 TRBV30A0A0K0K1B3 111 aa4.62□□□□□ -1.67
ECHDC1-210ENST00000454859 GAGE12HA6NDE8 117 aa4.62□□□□□ -1.67
ECHDC1-210ENST00000454859 IGLL5B9A064 214 aa4.62□□□□□ -1.67
ECHDC1-210ENST00000454859 RNF151Q2KHN1 245 aa4.62□□□□□ -1.67
ECHDC1-210ENST00000454859 C5orf38Q86SI9 138 aa4.62□□□□□ -1.67
ECHDC1-210ENST00000454859 LINC00308Q8TCZ7 52 aa4.62□□□□□ -1.67
ECHDC1-210ENST00000454859 RAB37Q96AX2 223 aa4.62□□□□□ -1.67
ECHDC1-210ENST00000454859 C1orf43Q9BWL3 253 aa4.62□□□□□ -1.67
ECHDC1-210ENST00000454859 FBN3Q75N90 2809 aa4.61□□□□□ -1.67
ECHDC1-210ENST00000454859 A4D1N5 150 aa4.61□□□□□ -1.67
ECHDC1-210ENST00000454859 NDUFC2O95298 119 aa4.61□□□□□ -1.67
ECHDC1-210ENST00000454859 CFC1BP0CG36 223 aa4.61□□□□□ -1.67
ECHDC1-210ENST00000454859 CFC1P0CG37 223 aa4.61□□□□□ -1.67
ECHDC1-210ENST00000454859 WFDC10BQ8IUB3 73 aa4.61□□□□□ -1.67
ECHDC1-210ENST00000454859 UBE2WQ96B02 151 aa4.61□□□□□ -1.67
ECHDC1-210ENST00000454859 ERG28Q9UKR5 140 aa4.61□□□□□ -1.67
ECHDC1-210ENST00000454859 TRAV13-2A0A0B4J235 113 aa4.61□□□□□ -1.67
ECHDC1-210ENST00000454859 IGKV3OR2-268A0A0C4DH90 116 aa4.61□□□□□ -1.67
ECHDC1-210ENST00000454859 KRTAP9-6A0A140TA67 174 aa4.61□□□□□ -1.67
ECHDC1-210ENST00000454859 PRB2P02812 416 aaPredicted RBP4.61□□□□□ -1.67
ECHDC1-210ENST00000454859 VAMP3Q15836 100 aa4.61□□□□□ -1.67
ECHDC1-210ENST00000454859 KRTAP26-1Q6PEX3 210 aa4.61□□□□□ -1.67
ECHDC1-210ENST00000454859 KRTAP9-8Q9BYQ0 159 aa4.61□□□□□ -1.67
ECHDC1-210ENST00000454859 PKIGQ9Y2B9 76 aa4.61□□□□□ -1.67
ECHDC1-210ENST00000454859 CBY1Q9Y3M2 126 aa4.61□□□□□ -1.67
ECHDC1-210ENST00000454859 LINC00588Q9Y4M8 146 aa4.61□□□□□ -1.67
ECHDC1-210ENST00000454859 MGAM2Q2M2H8 2515 aa4.6□□□□□ -1.67
ECHDC1-210ENST00000454859 K7EP34 96 aa4.6□□□□□ -1.67
ECHDC1-210ENST00000454859 COX6CP09669 75 aa4.6□□□□□ -1.67
ECHDC1-210ENST00000454859 TTC32Q5I0X7 151 aa4.6□□□□□ -1.67
ECHDC1-210ENST00000454859 ADAMTSL4-AS1Q5T5F5 129 aa4.6□□□□□ -1.67
ECHDC1-210ENST00000454859 APLNQ9ULZ1 77 aa4.6□□□□□ -1.67
ECHDC1-210ENST00000454859 NOTCH1P46531 2555 aa4.6□□□□□ -1.67
ECHDC1-210ENST00000454859 GAGE10A6NGK3 116 aa4.6□□□□□ -1.67
ECHDC1-210ENST00000454859 IGHV3-33P01772 117 aa4.6□□□□□ -1.67
ECHDC1-210ENST00000454859 SPAG11BQ08648 103 aa4.6□□□□□ -1.67
ECHDC1-210ENST00000454859 NTN5Q8WTR8 489 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-210ENST00000454859 TOMM7Q9P0U1 55 aa4.6□□□□□ -1.67
ECHDC1-210ENST00000454859 H3BUT2 72 aa4.59□□□□□ -1.67
ECHDC1-210ENST00000454859 M0QXV9 152 aa4.59□□□□□ -1.67
ECHDC1-210ENST00000454859 LINC00158P58513 81 aa4.58□□□□□ -1.68
ECHDC1-210ENST00000454859 ZNF561-AS1K7EIQ3 104 aa4.58□□□□□ -1.68
ECHDC1-210ENST00000454859 TSPAN13O95857 204 aa4.58□□□□□ -1.68
ECHDC1-210ENST00000454859 LINC01600Q96MT4 127 aa4.58□□□□□ -1.68
ECHDC1-210ENST00000454859 SPCS1Q9Y6A9 102 aa4.58□□□□□ -1.68
ECHDC1-210ENST00000454859 TRBV10-2A0A0K0K1G8 114 aa4.57□□□□□ -1.68
ECHDC1-210ENST00000454859 C14orf177Q52M58 125 aa4.57□□□□□ -1.68
ECHDC1-210ENST00000454859 CLPSL2Q6UWE3 100 aa4.57□□□□□ -1.68
ECHDC1-210ENST00000454859 MIR7-3HGQ8N6C7 128 aa4.57□□□□□ -1.68
ECHDC1-210ENST00000454859 F8W1H4 67 aa4.57□□□□□ -1.68
ECHDC1-210ENST00000454859 TLX1NBP0CAT3 122 aa4.57□□□□□ -1.68
ECHDC1-210ENST00000454859 SND1-IT1Q9HBX3 110 aa4.57□□□□□ -1.68
ECHDC1-210ENST00000454859 IGLV10-54A0A075B6I4 117 aa4.56□□□□□ -1.68
ECHDC1-210ENST00000454859 TENM3Q9P273 2699 aa4.56□□□□□ -1.68
ECHDC1-210ENST00000454859 K7ERJ3 54 aa4.56□□□□□ -1.68
ECHDC1-210ENST00000454859 Q8N3U1 123 aa4.56□□□□□ -1.68
ECHDC1-210ENST00000454859 CARD19Q96LW7 228 aa4.56□□□□□ -1.68
ECHDC1-210ENST00000454859 IGKV2D-24A0A075B6R9 120 aa4.55□□□□□ -1.68
ECHDC1-210ENST00000454859 RPL28P46779 137 aaKnown RBP4.55□□□□□ -1.68
ECHDC1-210ENST00000454859 UBE2DNLQ8IWF7 75 aa4.55□□□□□ -1.68
ECHDC1-210ENST00000454859 A0A1B0GX51 115 aa4.55□□□□□ -1.68
ECHDC1-210ENST00000454859 H0YGX0 51 aa4.55□□□□□ -1.68
ECHDC1-210ENST00000454859 PSMB2P49721 201 aa4.55□□□□□ -1.68
ECHDC1-210ENST00000454859 ATXN8Q156A1 80 aa4.55□□□□□ -1.68
ECHDC1-210ENST00000454859 SOSTDC1Q6X4U4 206 aa4.55□□□□□ -1.68
ECHDC1-210ENST00000454859 C15orf56Q8N910 161 aa4.55□□□□□ -1.68
ECHDC1-210ENST00000454859 CAMK2N2Q96S95 79 aa4.55□□□□□ -1.68
ECHDC1-210ENST00000454859 PLA2G2DQ9UNK4 145 aa4.55□□□□□ -1.68
ECHDC1-210ENST00000454859 TMEM126AQ9H061 195 aa4.54□□□□□ -1.68
ECHDC1-210ENST00000454859 NDUFC2-KCTD14E9PQ53 114 aa4.54□□□□□ -1.68
ECHDC1-210ENST00000454859 H3BQ85 93 aa4.54□□□□□ -1.68
ECHDC1-210ENST00000454859 SCGB1C2P0DMR2 95 aa4.54□□□□□ -1.68
ECHDC1-210ENST00000454859 RPL13AP40429 203 aaKnown RBP4.54□□□□□ -1.68
ECHDC1-210ENST00000454859 SYCNQ0VAF6 134 aa4.54□□□□□ -1.68
ECHDC1-210ENST00000454859 Q1RN00 199 aa4.54□□□□□ -1.68
ECHDC1-210ENST00000454859 HUWE1Q7Z6Z7 4374 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-210ENST00000454859 SNCGO76070 127 aa4.53□□□□□ -1.68
ECHDC1-210ENST00000454859 PFN2P35080 140 aa4.53□□□□□ -1.68
ECHDC1-210ENST00000454859 EIF4EBP3O60516 100 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-210ENST00000454859 TRACP01848 142 aa4.52□□□□□ -1.69
ECHDC1-210ENST00000454859 LORP23490 312 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-210ENST00000454859 C2orf82Q6UX34 121 aa4.52□□□□□ -1.69
ECHDC1-210ENST00000454859 UNQ6190/PRO20217Q6UXQ8 127 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms