RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 UBE2D1P51668 147 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 HERVK_113P61574 105 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 IGFL4Q6B9Z1 124 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 C10orf99Q6UWK7 81 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 CSNK1G2-AS1Q8NCQ2 148 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 IGLV2-18A0A075B6J9 118 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 IGHV3OR16-8A0A075B7F1 116 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 LOC107984156A0A0G2JMH3 177 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 TRBV7-7A0A0K0K1E9 115 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 LINC01549A6NIU2 74 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 ARL17AQ8IVW1 177 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 Q8N8P6 123 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 SLC25A29Q8N8R3 303 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 MPLKIPQ8TAP9 179 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 COPS9Q8WXC6 57 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 NXT2Q9NPJ8 142 aaKnown RBP5.41□□□□□ -1.54
BRCC3-208ENST00000453705 UPK3BQ9BT76 320 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 PHLDA3Q9Y5J5 127 aa5.41□□□□□ -1.54
BRCC3-208ENST00000453705 ZANQ9Y493 2812 aa5.4□□□□□ -1.54
BRCC3-208ENST00000453705 ATRQ13535 2644 aa5.4□□□□□ -1.54
BRCC3-208ENST00000453705 KIF25-AS1Q9Y6Z4 181 aa5.4□□□□□ -1.54
BRCC3-208ENST00000453705 SVEP1Q4LDE5 3571 aa5.4□□□□□ -1.55
BRCC3-208ENST00000453705 IGHV3-49A0A0A0MS15 119 aa5.4□□□□□ -1.55
BRCC3-208ENST00000453705 IGHV3-16A0A0C4DH30 117 aa5.4□□□□□ -1.55
BRCC3-208ENST00000453705 OCR1Q9BZK8 76 aa5.4□□□□□ -1.55
BRCC3-208ENST00000453705 TIMM8BQ9Y5J9 83 aaPredicted RBP5.4□□□□□ -1.55
BRCC3-208ENST00000453705 IGHV3-74A0A0B4J1X5 117 aa5.39□□□□□ -1.55
BRCC3-208ENST00000453705 A6NN06 94 aa5.39□□□□□ -1.55
BRCC3-208ENST00000453705 D6R8Y8 96 aa5.39□□□□□ -1.55
BRCC3-208ENST00000453705 RNASE3P12724 160 aaKnown RBP5.39□□□□□ -1.55
BRCC3-208ENST00000453705 PROK1P58294 105 aa5.39□□□□□ -1.55
BRCC3-208ENST00000453705 C9orf66Q5T8R8 295 aa5.39□□□□□ -1.55
BRCC3-208ENST00000453705 COL6A5A8TX70 2615 aa5.39□□□□□ -1.55
BRCC3-208ENST00000453705 TRBV6-5A0A0K0K1A5 114 aa5.39□□□□□ -1.55
BRCC3-208ENST00000453705 CXCL6P80162 114 aa5.39□□□□□ -1.55
BRCC3-208ENST00000453705 DEFB114Q30KQ6 69 aa5.39□□□□□ -1.55
BRCC3-208ENST00000453705 ZFP2Q6ZN57 461 aa5.39□□□□□ -1.55
BRCC3-208ENST00000453705 LINC00476Q8WZB0 136 aa5.39□□□□□ -1.55
BRCC3-208ENST00000453705 C8orf17Q9NRJ1 99 aa5.39□□□□□ -1.55
BRCC3-208ENST00000453705 FLNAP21333 2647 aaKnown RBP5.38□□□□□ -1.55
BRCC3-208ENST00000453705 PRSS2P07478 247 aa5.38□□□□□ -1.55
BRCC3-208ENST00000453705 UBE2AP49459 152 aa5.38□□□□□ -1.55
BRCC3-208ENST00000453705 FCER1GP30273 86 aa5.38□□□□□ -1.55
BRCC3-208ENST00000453705 LINC00315P59091 139 aa5.38□□□□□ -1.55
BRCC3-208ENST00000453705 LINC01006Q8NI28 216 aa5.38□□□□□ -1.55
BRCC3-208ENST00000453705 CKS2P33552 79 aa5.37□□□□□ -1.55
BRCC3-208ENST00000453705 TSPEAR-AS2P59090 65 aa5.37□□□□□ -1.55
BRCC3-208ENST00000453705 FAM104AQ969W3 186 aa5.37□□□□□ -1.55
BRCC3-208ENST00000453705 CSPG4Q6UVK1 2322 aa5.37□□□□□ -1.55
BRCC3-208ENST00000453705 H3BMM0 161 aa5.37□□□□□ -1.55
BRCC3-208ENST00000453705 SLC25A20O43772 301 aa5.37□□□□□ -1.55
BRCC3-208ENST00000453705 TMSB15BA0A087X1C1 80 aa5.36□□□□□ -1.55
BRCC3-208ENST00000453705 CCKP06307 115 aa5.36□□□□□ -1.55
BRCC3-208ENST00000453705 C10orf25Q5T742 122 aa5.36□□□□□ -1.55
BRCC3-208ENST00000453705 NDUFA11Q86Y39 141 aa5.36□□□□□ -1.55
BRCC3-208ENST00000453705 KLHL30-AS1Q8NEE0 82 aa5.36□□□□□ -1.55
BRCC3-208ENST00000453705 MUC4Q99102 2169 aa5.36□□□□□ -1.55
BRCC3-208ENST00000453705 A6NED7 52 aa5.36□□□□□ -1.55
BRCC3-208ENST00000453705 LINC01547P58512 204 aaPredicted RBP5.36□□□□□ -1.55
BRCC3-208ENST00000453705 DEFB121Q5J5C9 76 aa5.36□□□□□ -1.55
BRCC3-208ENST00000453705 IGLV5-39A0A0G2JS06 123 aa5.35□□□□□ -1.55
BRCC3-208ENST00000453705 KRTAP4-16G5E9R7 235 aaPredicted RBP5.35□□□□□ -1.55
BRCC3-208ENST00000453705 H3BVH4 76 aa5.35□□□□□ -1.55
BRCC3-208ENST00000453705 LUZP6Q538Z0 58 aa5.35□□□□□ -1.55
BRCC3-208ENST00000453705 B9D2Q9BPU9 175 aa5.35□□□□□ -1.55
BRCC3-208ENST00000453705 PLNP26678 52 aa5.35□□□□□ -1.55
BRCC3-208ENST00000453705 SPANXN1Q5VSR9 72 aa5.35□□□□□ -1.55
BRCC3-208ENST00000453705 SUMO4Q6EEV6 95 aa5.35□□□□□ -1.55
BRCC3-208ENST00000453705 SFTA2Q6UW10 78 aa5.35□□□□□ -1.55
BRCC3-208ENST00000453705 SMIM2Q9BVW6 85 aa5.35□□□□□ -1.55
BRCC3-208ENST00000453705 TRAV12-1A0A0B4J245 112 aa5.34□□□□□ -1.55
BRCC3-208ENST00000453705 DNHD1Q96M86 4753 aa5.34□□□□□ -1.55
BRCC3-208ENST00000453705 IGLV1-51P01701 117 aa5.34□□□□□ -1.55
BRCC3-208ENST00000453705 POLR2KP53803 58 aaKnown RBP5.33□□□□□ -1.56
BRCC3-208ENST00000453705 DYNLRB2Q8TF09 96 aa5.33□□□□□ -1.56
BRCC3-208ENST00000453705 ATOX1O00244 68 aa5.33□□□□□ -1.56
BRCC3-208ENST00000453705 SONP18583 2426 aaKnown RBP5.33□□□□□ -1.56
BRCC3-208ENST00000453705 HIVEP2P31629 2446 aa5.33□□□□□ -1.56
BRCC3-208ENST00000453705 GNRH2O43555 120 aa5.32□□□□□ -1.56
BRCC3-208ENST00000453705 MRPS36P82909 103 aaKnown RBP5.32□□□□□ -1.56
BRCC3-208ENST00000453705 RHOHQ15669 191 aa5.32□□□□□ -1.56
BRCC3-208ENST00000453705 C5orf38Q86SI9 138 aa5.32□□□□□ -1.56
BRCC3-208ENST00000453705 RETNLBQ9BQ08 111 aa5.32□□□□□ -1.56
BRCC3-208ENST00000453705 MRPL35Q9NZE8 188 aaKnown RBP5.32□□□□□ -1.56
BRCC3-208ENST00000453705 IGLV4-3A0A075B6K6 122 aa5.31□□□□□ -1.56
BRCC3-208ENST00000453705 TRBV10-2A0A0K0K1G8 114 aa5.31□□□□□ -1.56
BRCC3-208ENST00000453705 C3orf84H3BNL1 204 aa5.31□□□□□ -1.56
BRCC3-208ENST00000453705 INSP01308 110 aa5.31□□□□□ -1.56
BRCC3-208ENST00000453705 ACYP1P07311 99 aa5.31□□□□□ -1.56
BRCC3-208ENST00000453705 DEFB131AP59861 70 aa5.31□□□□□ -1.56
BRCC3-208ENST00000453705 DEFB136Q30KP8 78 aa5.31□□□□□ -1.56
BRCC3-208ENST00000453705 FXYD7P58549 80 aa5.31□□□□□ -1.56
BRCC3-208ENST00000453705 DEFB1P60022 68 aa5.31□□□□□ -1.56
BRCC3-208ENST00000453705 TMEM170BQ5T4T1 132 aa5.31□□□□□ -1.56
BRCC3-208ENST00000453705 TRAV12-3A0A0B4J271 114 aa5.3□□□□□ -1.56
BRCC3-208ENST00000453705 PRR4Q16378 134 aa5.3□□□□□ -1.56
BRCC3-208ENST00000453705 LYPD5Q6UWN5 251 aa5.3□□□□□ -1.56
BRCC3-208ENST00000453705 PRO1854Q9UHT4 67 aa5.3□□□□□ -1.56
BRCC3-208ENST00000453705 CFC1P0CG37 223 aa5.3□□□□□ -1.56
BRCC3-208ENST00000453705 FN1P02751 2386 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms