RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 GEMIN7Q9H840 131 aaKnown RBP7.92□□□□□ -1.14
HMGB3-204ENST00000448905 F8VRH5 84 aa7.91□□□□□ -1.14
HMGB3-204ENST00000448905 CRYGAP11844 174 aa7.91□□□□□ -1.14
HMGB3-204ENST00000448905 XAGE1AQ9HD64 81 aa7.91□□□□□ -1.14
HMGB3-204ENST00000448905 TP73-AS1Q9UF72 201 aa7.91□□□□□ -1.14
HMGB3-204ENST00000448905 FAM19A3Q7Z5A8 133 aa7.9□□□□□ -1.14
HMGB3-204ENST00000448905 MRPL55Q7Z7F7 128 aaKnown RBP7.9□□□□□ -1.14
HMGB3-204ENST00000448905 TYMSOSQ8TAI1 123 aa7.9□□□□□ -1.14
HMGB3-204ENST00000448905 IGIPA6NJ69 53 aa7.89□□□□□ -1.15
HMGB3-204ENST00000448905 BCE1O60756 84 aa7.89□□□□□ -1.15
HMGB3-204ENST00000448905 MT-ND4LP03901 98 aa7.89□□□□□ -1.15
HMGB3-204ENST00000448905 CXCL5P42830 114 aa7.89□□□□□ -1.15
HMGB3-204ENST00000448905 ZC2HC1BQ5TFG8 222 aa7.89□□□□□ -1.15
HMGB3-204ENST00000448905 NXT2Q9NPJ8 142 aaKnown RBP7.89□□□□□ -1.15
HMGB3-204ENST00000448905 ANAPC16Q96DE5 110 aa7.88□□□□□ -1.15
HMGB3-204ENST00000448905 PNRC1Q12796 327 aaPredicted RBP7.87□□□□□ -1.15
HMGB3-204ENST00000448905 CDKN2A-AS1Q9UH64 79 aa7.87□□□□□ -1.15
HMGB3-204ENST00000448905 MUC2Q02817 5179 aa7.86□□□□□ -1.15
HMGB3-204ENST00000448905 LINC00173Q6ZV60 143 aa7.86□□□□□ -1.15
HMGB3-204ENST00000448905 RPL37AP8A6NKH3 93 aa7.85□□□□□ -1.15
HMGB3-204ENST00000448905 LINC00167Q96N53 147 aa7.85□□□□□ -1.15
HMGB3-204ENST00000448905 TIMM17AQ99595 171 aa7.85□□□□□ -1.15
HMGB3-204ENST00000448905 KRTAP9-2Q9BYQ4 174 aa7.85□□□□□ -1.15
HMGB3-204ENST00000448905 LINC01549A6NIU2 74 aa7.84□□□□□ -1.15
HMGB3-204ENST00000448905 UBE2AP49459 152 aa7.84□□□□□ -1.15
HMGB3-204ENST00000448905 PDZD11Q5EBL8 140 aa7.84□□□□□ -1.15
HMGB3-204ENST00000448905 ERASQ7Z444 233 aa7.84□□□□□ -1.15
HMGB3-204ENST00000448905 SCGB3A1Q96QR1 104 aa7.84□□□□□ -1.15
HMGB3-204ENST00000448905 NKAPP1Q8N9T2 125 aa7.83□□□□□ -1.16
HMGB3-204ENST00000448905 COX7B2Q8TF08 81 aa7.83□□□□□ -1.16
HMGB3-204ENST00000448905 TOMM6Q96B49 74 aa7.83□□□□□ -1.16
HMGB3-204ENST00000448905 A0A087X002 238 aa7.82□□□□□ -1.16
HMGB3-204ENST00000448905 GAGE10A6NGK3 116 aa7.82□□□□□ -1.16
HMGB3-204ENST00000448905 RAB5BP61020 215 aa7.82□□□□□ -1.16
HMGB3-204ENST00000448905 TINCRA0A1B0GVN0 87 aa7.81□□□□□ -1.16
HMGB3-204ENST00000448905 IGKV2D-26A0A0A0MRZ7 120 aa7.8□□□□□ -1.16
HMGB3-204ENST00000448905 SMIM1B2RUZ4 78 aa7.8□□□□□ -1.16
HMGB3-204ENST00000448905 RAB14P61106 215 aa7.8□□□□□ -1.16
HMGB3-204ENST00000448905 FAM229BQ4G0N7 80 aa7.8□□□□□ -1.16
HMGB3-204ENST00000448905 MRPL18Q9H0U6 180 aaKnown RBP7.8□□□□□ -1.16
HMGB3-204ENST00000448905 ATP5LO75964 103 aa7.79□□□□□ -1.16
HMGB3-204ENST00000448905 CTAG1AP78358 180 aa7.79□□□□□ -1.16
HMGB3-204ENST00000448905 ANAPC11Q9NYG5 84 aa7.79□□□□□ -1.16
HMGB3-204ENST00000448905 IGLV5-37A0A075B6J1 123 aa7.78□□□□□ -1.16
HMGB3-204ENST00000448905 H3BRM9 83 aa7.78□□□□□ -1.16
HMGB3-204ENST00000448905 LINC00304Q8N9R0 145 aa7.78□□□□□ -1.16
HMGB3-204ENST00000448905 CDIP1Q9H305 208 aa7.78□□□□□ -1.16
HMGB3-204ENST00000448905 CST9LQ9H4G1 147 aa7.77□□□□□ -1.17
HMGB3-204ENST00000448905 IGLV5-45A0A087WSX0 123 aa7.76□□□□□ -1.17
HMGB3-204ENST00000448905 RPL24P83731 157 aaKnown RBP7.76□□□□□ -1.17
HMGB3-204ENST00000448905 PMVKQ15126 192 aa7.76□□□□□ -1.17
HMGB3-204ENST00000448905 KIAA1644Q3SXP7 199 aa7.76□□□□□ -1.17
HMGB3-204ENST00000448905 IGKV2-28A0A075B6P5 120 aa7.75□□□□□ -1.17
HMGB3-204ENST00000448905 A0A1B0GVG6 124 aa7.75□□□□□ -1.17
HMGB3-204ENST00000448905 IGKV2D-28P01615 120 aa7.75□□□□□ -1.17
HMGB3-204ENST00000448905 SPINK8P0C7L1 97 aa7.75□□□□□ -1.17
HMGB3-204ENST00000448905 ADCYAP1P18509 176 aa7.75□□□□□ -1.17
HMGB3-204ENST00000448905 KRTAP13-2Q52LG2 175 aa7.75□□□□□ -1.17
HMGB3-204ENST00000448905 IGLV7-46A0A075B6I9 117 aa7.74□□□□□ -1.17
HMGB3-204ENST00000448905 PFN2P35080 140 aa7.74□□□□□ -1.17
HMGB3-204ENST00000448905 KRTAP13-1Q8IUC0 172 aa7.74□□□□□ -1.17
HMGB3-204ENST00000448905 TRAV9-1A0A075B6T8 112 aa7.73□□□□□ -1.17
HMGB3-204ENST00000448905 FAM19A1Q7Z5A9 133 aa7.73□□□□□ -1.17
HMGB3-204ENST00000448905 RETNLBQ9BQ08 111 aa7.73□□□□□ -1.17
HMGB3-204ENST00000448905 GNB1LQ9BYB4 327 aa7.73□□□□□ -1.17
HMGB3-204ENST00000448905 SMCO4Q9NRQ5 59 aa7.73□□□□□ -1.17
HMGB3-204ENST00000448905 S100PP25815 95 aa7.72□□□□□ -1.17
HMGB3-204ENST00000448905 COX17Q14061 63 aa7.72□□□□□ -1.17
HMGB3-204ENST00000448905 TPRXLQ17RH7 258 aa7.72□□□□□ -1.17
HMGB3-204ENST00000448905 FA2HQ7L5A8 372 aa7.72□□□□□ -1.17
HMGB3-204ENST00000448905 LINC01546A6NGU7 62 aa7.71□□□□□ -1.18
HMGB3-204ENST00000448905 C4orf48Q5BLP8 95 aa7.71□□□□□ -1.18
HMGB3-204ENST00000448905 SPAG11AQ6PDA7 123 aa7.71□□□□□ -1.18
HMGB3-204ENST00000448905 TMEM126AQ9H061 195 aa7.71□□□□□ -1.18
HMGB3-204ENST00000448905 NDUFA6P56556 154 aa7.7□□□□□ -1.18
HMGB3-204ENST00000448905 PRLHP81277 87 aa7.7□□□□□ -1.18
HMGB3-204ENST00000448905 COX19Q49B96 90 aa7.7□□□□□ -1.18
HMGB3-204ENST00000448905 SFTA2Q6UW10 78 aa7.7□□□□□ -1.18
HMGB3-204ENST00000448905 CBLN2Q8IUK8 224 aa7.7□□□□□ -1.18
HMGB3-204ENST00000448905 PLEKHB2Q96CS7 222 aa7.7□□□□□ -1.18
HMGB3-204ENST00000448905 FAT4Q6V0I7 4981 aa7.7□□□□□ -1.18
HMGB3-204ENST00000448905 LCE2AQ5TA79 106 aaPredicted RBP7.69□□□□□ -1.18
HMGB3-204ENST00000448905 SND1-IT1Q9HBX3 110 aa7.69□□□□□ -1.18
HMGB3-204ENST00000448905 ERG28Q9UKR5 140 aa7.69□□□□□ -1.18
HMGB3-204ENST00000448905 KRTAP9-6A0A140TA67 174 aa7.68□□□□□ -1.18
HMGB3-204ENST00000448905 SCO1O75880 301 aa7.68□□□□□ -1.18
HMGB3-204ENST00000448905 VPREB1P12018 145 aa7.68□□□□□ -1.18
HMGB3-204ENST00000448905 PPDPFQ9H3Y8 114 aa7.68□□□□□ -1.18
HMGB3-204ENST00000448905 IGLV5-39A0A0G2JS06 123 aa7.67□□□□□ -1.18
HMGB3-204ENST00000448905 TMEM238C9JI98 176 aa7.67□□□□□ -1.18
HMGB3-204ENST00000448905 FABP9Q0Z7S8 132 aa7.67□□□□□ -1.18
HMGB3-204ENST00000448905 LINC00337Q8N6G1 96 aa7.67□□□□□ -1.18
HMGB3-204ENST00000448905 M0R378 163 aa7.66□□□□□ -1.18
HMGB3-204ENST00000448905 IGLC3P0DOY3 106 aa7.66□□□□□ -1.18
HMGB3-204ENST00000448905 HIGD2AQ9BW72 106 aa7.66□□□□□ -1.18
HMGB3-204ENST00000448905 UQCC3Q6UW78 93 aa7.65□□□□□ -1.18
HMGB3-204ENST00000448905 ZNF625Q96I27 306 aaPredicted RBP7.65□□□□□ -1.18
HMGB3-204ENST00000448905 ZNF706Q9Y5V0 76 aaPredicted RBP7.65□□□□□ -1.18
HMGB3-204ENST00000448905 TMEM218A2RU14 115 aa7.64□□□□□ -1.19
HMGB3-204ENST00000448905 ATP6V1G1O75348 118 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms