RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 SHPRHQ149N8 1683 aa1.18□□□□□ -2.22
PMS1-216ENST00000447734 KCPQ6ZWJ8 1503 aa1.18□□□□□ -2.22
PMS1-216ENST00000447734 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.18□□□□□ -2.22
PMS1-216ENST00000447734 CRYBG1Q9Y4K1 1723 aa1.18□□□□□ -2.22
PMS1-216ENST00000447734 JMJD1CQ15652 2540 aa1.17□□□□□ -2.22
PMS1-216ENST00000447734 A0A0D9SFI3 127 aa1.17□□□□□ -2.22
PMS1-216ENST00000447734 TARBP1Q13395 1621 aaKnown RBP1.16□□□□□ -2.22
PMS1-216ENST00000447734 XRN1Q8IZH2 1706 aaKnown RBP1.16□□□□□ -2.22
PMS1-216ENST00000447734 FAM103A1Q9BTL3 118 aaKnown RBP1.16□□□□□ -2.22
PMS1-216ENST00000447734 C5P01031 1676 aa1.16□□□□□ -2.22
PMS1-216ENST00000447734 ANKARQ7Z5J8 1434 aa1.15□□□□□ -2.22
PMS1-216ENST00000447734 A0A1B0GUT8 65 aa1.15□□□□□ -2.23
PMS1-216ENST00000447734 COX6A2Q02221 97 aa1.15□□□□□ -2.23
PMS1-216ENST00000447734 C18orf32Q8TCD1 76 aa1.15□□□□□ -2.23
PMS1-216ENST00000447734 SMCO4Q9NRQ5 59 aa1.15□□□□□ -2.23
PMS1-216ENST00000447734 HMCN1Q96RW7 5635 aa1.15□□□□□ -2.23
PMS1-216ENST00000447734 ABCC1P33527 1531 aa1.15□□□□□ -2.23
PMS1-216ENST00000447734 ASH1LQ9NR48 2969 aaKnown RBP1.14□□□□□ -2.23
PMS1-216ENST00000447734 PAPPA2Q9BXP8 1791 aa1.14□□□□□ -2.23
PMS1-216ENST00000447734 LRRC9Q6ZRR7 1453 aa1.14□□□□□ -2.23
PMS1-216ENST00000447734 TRBV7-4A0A0J9YYF1 115 aa1.14□□□□□ -2.23
PMS1-216ENST00000447734 ZFHX3Q15911 3703 aa1.14□□□□□ -2.23
PMS1-216ENST00000447734 TMEM131LA2VDJ0 1609 aa1.14□□□□□ -2.23
PMS1-216ENST00000447734 AHCTF1Q8WYP5 2266 aa1.14□□□□□ -2.23
PMS1-216ENST00000447734 HELZ2Q9BYK8 2649 aaKnown RBP1.14□□□□□ -2.23
PMS1-216ENST00000447734 KMT2BQ9UMN6 2715 aaPredicted RBP1.13□□□□□ -2.23
PMS1-216ENST00000447734 LINC00959A0A1B0GUT2 108 aa1.13□□□□□ -2.23
PMS1-216ENST00000447734 CNFNQ9BYD5 112 aa1.13□□□□□ -2.23
PMS1-216ENST00000447734 TP53AIP1Q9HCN2 124 aa1.13□□□□□ -2.23
PMS1-216ENST00000447734 NHSL1Q5SYE7 1610 aa1.13□□□□□ -2.23
PMS1-216ENST00000447734 ATP7BP35670 1465 aa1.12□□□□□ -2.23
PMS1-216ENST00000447734 DEFA5Q01523 94 aa1.12□□□□□ -2.23
PMS1-216ENST00000447734 DEFB121Q5J5C9 76 aa1.12□□□□□ -2.23
PMS1-216ENST00000447734 SAMD9Q5K651 1589 aa1.12□□□□□ -2.23
PMS1-216ENST00000447734 CFAP74Q9C0B2 1584 aa1.12□□□□□ -2.23
PMS1-216ENST00000447734 A0A0G2JMZ2 1700 aa1.12□□□□□ -2.23
PMS1-216ENST00000447734 LAMC1P11047 1609 aa1.11□□□□□ -2.23
PMS1-216ENST00000447734 ANKRD36A6QL64 1941 aa1.11□□□□□ -2.23
PMS1-216ENST00000447734 PDCD5O14737 125 aa1.11□□□□□ -2.23
PMS1-216ENST00000447734 CFDP00746 253 aaPredicted RBP1.11□□□□□ -2.23
PMS1-216ENST00000447734 SMIM13P0DJ93 91 aa1.11□□□□□ -2.23
PMS1-216ENST00000447734 DEFB112Q30KQ8 113 aa1.11□□□□□ -2.23
PMS1-216ENST00000447734 LRRIQ1Q96JM4 1722 aa1.1□□□□□ -2.23
PMS1-216ENST00000447734 PIGYQ3MUY2 71 aa1.1□□□□□ -2.23
PMS1-216ENST00000447734 PRO0255Q9UI72 69 aa1.1□□□□□ -2.23
PMS1-216ENST00000447734 PTPN23Q9H3S7 1636 aa1.1□□□□□ -2.23
PMS1-216ENST00000447734 ALKQ9UM73 1620 aa1.1□□□□□ -2.23
PMS1-216ENST00000447734 CCDC88BA6NC98 1476 aa1.1□□□□□ -2.23
PMS1-216ENST00000447734 NCOA2Q15596 1464 aa1.1□□□□□ -2.23
PMS1-216ENST00000447734 GOLGA4Q13439 2230 aaKnown RBP1.09□□□□□ -2.23
PMS1-216ENST00000447734 I3L2K1 104 aa1.09□□□□□ -2.23
PMS1-216ENST00000447734 KRTAP4-1Q9BYQ7 146 aa1.09□□□□□ -2.23
PMS1-216ENST00000447734 KIF20BQ96Q89 1820 aa1.09□□□□□ -2.23
PMS1-216ENST00000447734 TULP4Q9NRJ4 1543 aa1.09□□□□□ -2.24
PMS1-216ENST00000447734 PKD1L3Q7Z443 1732 aa1.09□□□□□ -2.24
PMS1-216ENST00000447734 SETBP1Q9Y6X0 1596 aa1.08□□□□□ -2.24
PMS1-216ENST00000447734 KIAA0556O60303 1618 aa1.08□□□□□ -2.24
PMS1-216ENST00000447734 A0A087WXM4 84 aa1.08□□□□□ -2.24
PMS1-216ENST00000447734 ATP5EP2Q5VTU8 51 aa1.08□□□□□ -2.24
PMS1-216ENST00000447734 FAM208BQ5VWN6 2430 aa1.08□□□□□ -2.24
PMS1-216ENST00000447734 RGPD8O14715 1765 aaPredicted RBP1.08□□□□□ -2.24
PMS1-216ENST00000447734 RGPD5Q99666 1765 aa1.08□□□□□ -2.24
PMS1-216ENST00000447734 ABCA8O94911 1581 aa1.08□□□□□ -2.24
PMS1-216ENST00000447734 NKTRP30414 1462 aaKnown RBP1.07□□□□□ -2.24
PMS1-216ENST00000447734 UMAD1C9J7I0 102 aa1.07□□□□□ -2.24
PMS1-216ENST00000447734 GAFA1Q96PS6 74 aa1.07□□□□□ -2.24
PMS1-216ENST00000447734 CRCT1Q9UGL9 99 aa1.07□□□□□ -2.24
PMS1-216ENST00000447734 URB2Q14146 1524 aaKnown RBP1.06□□□□□ -2.24
PMS1-216ENST00000447734 ZNF462Q96JM2 2506 aa1.06□□□□□ -2.24
PMS1-216ENST00000447734 FXYD6-FXYD2A0A087WZ82 144 aa1.06□□□□□ -2.24
PMS1-216ENST00000447734 TRAV21A0A0B4J279 112 aa1.06□□□□□ -2.24
PMS1-216ENST00000447734 NDUFB1O75438 58 aa1.06□□□□□ -2.24
PMS1-216ENST00000447734 WFDC9Q8NEX5 89 aa1.06□□□□□ -2.24
PMS1-216ENST00000447734 PAPPAQ13219 1627 aa1.06□□□□□ -2.24
PMS1-216ENST00000447734 PPRC1Q5VV67 1664 aaKnown RBP1.06□□□□□ -2.24
PMS1-216ENST00000447734 SLIT1O75093 1534 aa1.05□□□□□ -2.24
PMS1-216ENST00000447734 UGGT2Q9NYU1 1516 aa1.05□□□□□ -2.24
PMS1-216ENST00000447734 IFI27P40305 119 aaPredicted RBP1.05□□□□□ -2.24
PMS1-216ENST00000447734 Q8IZM0 81 aa1.05□□□□□ -2.24
PMS1-216ENST00000447734 LTN1O94822 1766 aa1.05□□□□□ -2.24
PMS1-216ENST00000447734 OTOGLQ3ZCN5 2332 aa1.05□□□□□ -2.24
PMS1-216ENST00000447734 LRRC7Q96NW7 1537 aa1.05□□□□□ -2.24
PMS1-216ENST00000447734 DNMBPQ6XZF7 1577 aa1.04□□□□□ -2.24
PMS1-216ENST00000447734 FCGBPQ9Y6R7 5405 aaPredicted RBP1.04□□□□□ -2.24
PMS1-216ENST00000447734 DEFB123Q8N688 67 aa1.04□□□□□ -2.24
PMS1-216ENST00000447734 USMG5Q96IX5 58 aa1.04□□□□□ -2.24
PMS1-216ENST00000447734 CCDC141Q6ZP82 1450 aa1.04□□□□□ -2.24
PMS1-216ENST00000447734 PIK3C2BO00750 1634 aa1.04□□□□□ -2.24
PMS1-216ENST00000447734 RGPD1P0DJD0 1748 aa1.03□□□□□ -2.24
PMS1-216ENST00000447734 RGPD2P0DJD1 1756 aa1.03□□□□□ -2.24
PMS1-216ENST00000447734 COX7BP24311 80 aa1.03□□□□□ -2.24
PMS1-216ENST00000447734 CRIPTQ9P021 101 aa1.03□□□□□ -2.24
PMS1-216ENST00000447734 LRRC37AA6NMS7 1700 aa1.03□□□□□ -2.24
PMS1-216ENST00000447734 MYO5CQ9NQX4 1742 aa1.03□□□□□ -2.24
PMS1-216ENST00000447734 UBR3Q6ZT12 1888 aa1.03□□□□□ -2.25
PMS1-216ENST00000447734 IFI6P09912 130 aa1.02□□□□□ -2.25
PMS1-216ENST00000447734 IQGAP3Q86VI3 1631 aa1.02□□□□□ -2.25
PMS1-216ENST00000447734 SCN11AQ9UI33 1791 aa1.02□□□□□ -2.25
PMS1-216ENST00000447734 URB1O60287 2271 aaKnown RBP1.01□□□□□ -2.25
PMS1-216ENST00000447734 DUOX2Q9NRD8 1548 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms