RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 C3orf22Q8N5N4 141 aa13.25□□□□□ -0.29
SDCBP-204ENST00000447182 C14orf132Q9NPU4 83 aa13.24□□□□□ -0.29
SDCBP-204ENST00000447182 NIPBLQ6KC79 2804 aaeCLIP13.24□□□□□ -0.29
SDCBP-204ENST00000447182 UQCRQO14949 82 aa13.24□□□□□ -0.29
SDCBP-204ENST00000447182 HIST1H4AP62805 103 aaKnown RBP13.24□□□□□ -0.29
SDCBP-204ENST00000447182 SS18Q15532 418 aa13.24□□□□□ -0.29
SDCBP-204ENST00000447182 OR13C6PQ8NH95 151 aa13.24□□□□□ -0.29
SDCBP-204ENST00000447182 CUBNO60494 3623 aa13.23□□□□□ -0.29
SDCBP-204ENST00000447182 DEFB130BP0DP73 79 aa13.22□□□□□ -0.29
SDCBP-204ENST00000447182 DEFB130AP0DP74 79 aa13.22□□□□□ -0.29
SDCBP-204ENST00000447182 GYPEP15421 78 aa13.22□□□□□ -0.29
SDCBP-204ENST00000447182 XCL1P47992 114 aa13.21□□□□□ -0.29
SDCBP-204ENST00000447182 SMIM20Q8N5G0 67 aa13.21□□□□□ -0.3
SDCBP-204ENST00000447182 LINC00526Q96FQ7 95 aa13.21□□□□□ -0.3
SDCBP-204ENST00000447182 LINC00167Q96N53 147 aa13.19□□□□□ -0.3
SDCBP-204ENST00000447182 C11orf68Q9H3H3 251 aaKnown RBP13.19□□□□□ -0.3
SDCBP-204ENST00000447182 ORMDL1Q9P0S3 153 aa13.19□□□□□ -0.3
SDCBP-204ENST00000447182 SETD2Q9BYW2 2564 aaPredicted RBP13.19□□□□□ -0.3
SDCBP-204ENST00000447182 A0A1B0GX51 115 aa13.19□□□□□ -0.3
SDCBP-204ENST00000447182 KRTAP1-1Q07627 177 aa13.19□□□□□ -0.3
SDCBP-204ENST00000447182 C9orf153Q5TBE3 101 aa13.19□□□□□ -0.3
SDCBP-204ENST00000447182 Q6JHZ5 121 aa13.19□□□□□ -0.3
SDCBP-204ENST00000447182 FLNAP21333 2647 aaKnown RBP13.18□□□□□ -0.3
SDCBP-204ENST00000447182 LINC00846Q9NV44 126 aa13.18□□□□□ -0.3
SDCBP-204ENST00000447182 ATOX1O00244 68 aa13.17□□□□□ -0.3
SDCBP-204ENST00000447182 NCR3O14931 201 aa13.17□□□□□ -0.3
SDCBP-204ENST00000447182 PRO0255Q9UI72 69 aa13.17□□□□□ -0.3
SDCBP-204ENST00000447182 CCDC168Q8NDH2 2452 aa13.17□□□□□ -0.3
SDCBP-204ENST00000447182 NDUFC2O95298 119 aa13.16□□□□□ -0.3
SDCBP-204ENST00000447182 SLPIP03973 132 aa13.16□□□□□ -0.3
SDCBP-204ENST00000447182 COX7CP15954 63 aa13.16□□□□□ -0.3
SDCBP-204ENST00000447182 NANOS2P60321 138 aaKnown RBP13.16□□□□□ -0.3
SDCBP-204ENST00000447182 COX17Q14061 63 aa13.16□□□□□ -0.3
SDCBP-204ENST00000447182 C3orf56Q8N813 242 aa13.16□□□□□ -0.3
SDCBP-204ENST00000447182 C2orf48Q96LS8 159 aa13.15□□□□□ -0.3
SDCBP-204ENST00000447182 KIAA0087Q14695 138 aa13.14□□□□□ -0.31
SDCBP-204ENST00000447182 X6R8D5 127 aa13.14□□□□□ -0.31
SDCBP-204ENST00000447182 SMIM9A6NGZ8 99 aa13.13□□□□□ -0.31
SDCBP-204ENST00000447182 CD164L2Q6UWJ8 174 aa13.13□□□□□ -0.31
SDCBP-204ENST00000447182 CCKP06307 115 aa13.12□□□□□ -0.31
SDCBP-204ENST00000447182 CLPSL2Q6UWE3 100 aa13.12□□□□□ -0.31
SDCBP-204ENST00000447182 Q8N814 137 aa13.12□□□□□ -0.31
SDCBP-204ENST00000447182 IGHV4-28A0A0C4DH34 117 aa13.12□□□□□ -0.31
SDCBP-204ENST00000447182 RPL18AQ02543 176 aaKnown RBP13.12□□□□□ -0.31
SDCBP-204ENST00000447182 JMJD7-PLA2G4BH0Y9G9 81 aa13.11□□□□□ -0.31
SDCBP-204ENST00000447182 IGKV3D-7A0A0C4DH55 119 aa13.1□□□□□ -0.31
SDCBP-204ENST00000447182 CRYGAP11844 174 aa13.1□□□□□ -0.31
SDCBP-204ENST00000447182 TMEM256-PLSCR3K7ERE1 68 aa13.09□□□□□ -0.31
SDCBP-204ENST00000447182 HILS1P60008 231 aa13.09□□□□□ -0.31
SDCBP-204ENST00000447182 CFAP161Q6P656 301 aa13.09□□□□□ -0.31
SDCBP-204ENST00000447182 ANK3Q12955 4377 aaKnown RBP13.09□□□□□ -0.31
SDCBP-204ENST00000447182 PRR3P79522 188 aaKnown RBP13.09□□□□□ -0.31
SDCBP-204ENST00000447182 LINC00269Q8N2A0 174 aa13.09□□□□□ -0.31
SDCBP-204ENST00000447182 LYRM9A8MSI8 78 aa13.08□□□□□ -0.32
SDCBP-204ENST00000447182 CHCHD10Q8WYQ3 142 aaPredicted RBP13.08□□□□□ -0.32
SDCBP-204ENST00000447182 A0A096LPF7 62 aa13.07□□□□□ -0.32
SDCBP-204ENST00000447182 FN1P02751 2386 aaKnown RBP13.07□□□□□ -0.32
SDCBP-204ENST00000447182 LINC00482Q8N8I6 264 aa13.06□□□□□ -0.32
SDCBP-204ENST00000447182 S100A7L2Q5SY68 101 aa13.06□□□□□ -0.32
SDCBP-204ENST00000447182 REG3AQ06141 175 aa13.04□□□□□ -0.32
SDCBP-204ENST00000447182 MTORP42345 2549 aa13.04□□□□□ -0.32
SDCBP-204ENST00000447182 ANGP03950 147 aaKnown RBP13.03□□□□□ -0.32
SDCBP-204ENST00000447182 KRTAP10-3P60369 221 aa13.03□□□□□ -0.32
SDCBP-204ENST00000447182 MUC7Q8TAX7 377 aa13.03□□□□□ -0.32
SDCBP-204ENST00000447182 ACANP16112 2415 aa13.03□□□□□ -0.32
SDCBP-204ENST00000447182 A0A087WVE0 104 aa13.02□□□□□ -0.33
SDCBP-204ENST00000447182 ATP5EP2Q5VTU8 51 aa13.02□□□□□ -0.33
SDCBP-204ENST00000447182 SERP2Q8N6R1 65 aa13.02□□□□□ -0.33
SDCBP-204ENST00000447182 C9orf116Q5BN46 136 aaPredicted RBP13.01□□□□□ -0.33
SDCBP-204ENST00000447182 IGLV10-54A0A075B6I4 117 aa13.01□□□□□ -0.33
SDCBP-204ENST00000447182 C6orf99Q4VX62 202 aa13.01□□□□□ -0.33
SDCBP-204ENST00000447182 USP17L23D6RBM5 183 aa13□□□□□ -0.33
SDCBP-204ENST00000447182 Q8NDZ9 215 aa13□□□□□ -0.33
SDCBP-204ENST00000447182 PDZD2O15018 2839 aa13□□□□□ -0.33
SDCBP-204ENST00000447182 LYPD5Q6UWN5 251 aa13□□□□□ -0.33
SDCBP-204ENST00000447182 Q8N3U1 123 aa13□□□□□ -0.33
SDCBP-204ENST00000447182 LINC00575Q6W349 94 aa12.99□□□□□ -0.33
SDCBP-204ENST00000447182 GCN1Q92616 2671 aaKnown RBP12.99□□□□□ -0.33
SDCBP-204ENST00000447182 hADV29S1A0JD25 119 aa12.98□□□□□ -0.33
SDCBP-204ENST00000447182 UPK3BQ9BT76 320 aa12.97□□□□□ -0.33
SDCBP-204ENST00000447182 A0A0J9YWU9 116 aa12.95□□□□□ -0.34
SDCBP-204ENST00000447182 IGHV4-30-4P0DP06 118 aa12.95□□□□□ -0.34
SDCBP-204ENST00000447182 DAD1P61803 113 aa12.95□□□□□ -0.34
SDCBP-204ENST00000447182 TRBV10-3A0A0K0K1G6 114 aa12.94□□□□□ -0.34
SDCBP-204ENST00000447182 DEFB135Q30KP9 77 aa12.94□□□□□ -0.34
SDCBP-204ENST00000447182 SPAG11BQ08648 103 aa12.94□□□□□ -0.34
SDCBP-204ENST00000447182 C10orf25Q5T742 122 aa12.94□□□□□ -0.34
SDCBP-204ENST00000447182 NBEAL2Q6ZNJ1 2754 aa12.93□□□□□ -0.34
SDCBP-204ENST00000447182 DEFB4AO15263 64 aa12.93□□□□□ -0.34
SDCBP-204ENST00000447182 C9orf66Q5T8R8 295 aa12.93□□□□□ -0.34
SDCBP-204ENST00000447182 UNQ6190/PRO20217Q6UXQ8 127 aa12.93□□□□□ -0.34
SDCBP-204ENST00000447182 CYSTM1Q9H1C7 97 aa12.93□□□□□ -0.34
SDCBP-204ENST00000447182 ZNF561-AS1K7EIQ3 104 aa12.92□□□□□ -0.34
SDCBP-204ENST00000447182 IGLV6-57P01721 117 aa12.92□□□□□ -0.34
SDCBP-204ENST00000447182 UBL5Q9BZL1 73 aa12.92□□□□□ -0.34
SDCBP-204ENST00000447182 J3KT08 172 aa12.92□□□□□ -0.34
SDCBP-204ENST00000447182 APOC4P55056 127 aa12.92□□□□□ -0.34
SDCBP-204ENST00000447182 LELP1Q5T871 98 aa12.92□□□□□ -0.34
SDCBP-204ENST00000447182 C6orf223Q8N319 242 aa12.92□□□□□ -0.34
SDCBP-204ENST00000447182 LOC110117498A0A087WWA1 95 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms