RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 IGLV1-50A0A075B6I6 118 aa12.69□□□□□ -0.38
VSX1-206ENST00000444511 KIAA1644Q3SXP7 199 aa12.68□□□□□ -0.38
VSX1-206ENST00000444511 TOMM6Q96B49 74 aa12.68□□□□□ -0.38
VSX1-206ENST00000444511 KRTAP1-4P0C5Y4 121 aa12.67□□□□□ -0.38
VSX1-206ENST00000444511 XAGE1AQ9HD64 81 aa12.67□□□□□ -0.38
VSX1-206ENST00000444511 F8VRH5 84 aa12.66□□□□□ -0.38
VSX1-206ENST00000444511 C22orf24Q9Y442 160 aa12.66□□□□□ -0.38
VSX1-206ENST00000444511 LBHQ53QV2 105 aaPredicted RBP12.65□□□□□ -0.38
VSX1-206ENST00000444511 CLLU1Q5K131 121 aa12.65□□□□□ -0.38
VSX1-206ENST00000444511 ERASQ7Z444 233 aa12.65□□□□□ -0.38
VSX1-206ENST00000444511 SCGB3A1Q96QR1 104 aa12.65□□□□□ -0.38
VSX1-206ENST00000444511 CXCL5P42830 114 aa12.64□□□□□ -0.39
VSX1-206ENST00000444511 TRAV9-1A0A075B6T8 112 aa12.62□□□□□ -0.39
VSX1-206ENST00000444511 NUPR1O60356 82 aa12.62□□□□□ -0.39
VSX1-206ENST00000444511 ZNF861PO60384 105 aa12.62□□□□□ -0.39
VSX1-206ENST00000444511 RPL13AP40429 203 aaKnown RBP12.62□□□□□ -0.39
VSX1-206ENST00000444511 ADCYAP1P18509 176 aa12.61□□□□□ -0.39
VSX1-206ENST00000444511 SMIM1B2RUZ4 78 aa12.6□□□□□ -0.39
VSX1-206ENST00000444511 UQCC3Q6UW78 93 aa12.6□□□□□ -0.39
VSX1-206ENST00000444511 TINCRA0A1B0GVN0 87 aa12.59□□□□□ -0.39
VSX1-206ENST00000444511 TMEM218A2RU14 115 aa12.59□□□□□ -0.39
VSX1-206ENST00000444511 LINC01549A6NIU2 74 aa12.59□□□□□ -0.39
VSX1-206ENST00000444511 S100PP25815 95 aa12.59□□□□□ -0.39
VSX1-206ENST00000444511 PDZD11Q5EBL8 140 aa12.59□□□□□ -0.39
VSX1-206ENST00000444511 MRPL55Q7Z7F7 128 aaKnown RBP12.59□□□□□ -0.39
VSX1-206ENST00000444511 COX7B2Q8TF08 81 aa12.59□□□□□ -0.39
VSX1-206ENST00000444511 TP73-AS1Q9UF72 201 aa12.59□□□□□ -0.39
VSX1-206ENST00000444511 GNB1LQ9BYB4 327 aa12.58□□□□□ -0.4
VSX1-206ENST00000444511 CARHSP1Q9Y2V2 147 aaKnown RBP12.58□□□□□ -0.4
VSX1-206ENST00000444511 IGLV5-45A0A087WSX0 123 aa12.56□□□□□ -0.4
VSX1-206ENST00000444511 CST9LQ9H4G1 147 aa12.56□□□□□ -0.4
VSX1-206ENST00000444511 LINC01546A6NGU7 62 aa12.55□□□□□ -0.4
VSX1-206ENST00000444511 LPAP08519 4548 aa12.55□□□□□ -0.4
VSX1-206ENST00000444511 SPINK8P0C7L1 97 aa12.54□□□□□ -0.4
VSX1-206ENST00000444511 RPL28P46779 137 aaKnown RBP12.54□□□□□ -0.4
VSX1-206ENST00000444511 FA2HQ7L5A8 372 aa12.54□□□□□ -0.4
VSX1-206ENST00000444511 BCE1O60756 84 aa12.53□□□□□ -0.4
VSX1-206ENST00000444511 PMVKQ15126 192 aa12.53□□□□□ -0.4
VSX1-206ENST00000444511 SEC11CQ9BY50 192 aa12.53□□□□□ -0.4
VSX1-206ENST00000444511 SMCO4Q9NRQ5 59 aa12.53□□□□□ -0.4
VSX1-206ENST00000444511 RAB5BP61020 215 aa12.52□□□□□ -0.41
VSX1-206ENST00000444511 PRR4Q16378 134 aa12.52□□□□□ -0.41
VSX1-206ENST00000444511 COX19Q49B96 90 aa12.52□□□□□ -0.41
VSX1-206ENST00000444511 LINC00167Q96N53 147 aa12.52□□□□□ -0.41
VSX1-206ENST00000444511 RPL37AP8A6NKH3 93 aa12.51□□□□□ -0.41
VSX1-206ENST00000444511 MRPL18Q9H0U6 180 aaKnown RBP12.51□□□□□ -0.41
VSX1-206ENST00000444511 GAGE10A6NGK3 116 aa12.5□□□□□ -0.41
VSX1-206ENST00000444511 H3BRM9 83 aa12.5□□□□□ -0.41
VSX1-206ENST00000444511 FABP9Q0Z7S8 132 aa12.5□□□□□ -0.41
VSX1-206ENST00000444511 NKAPP1Q8N9T2 125 aa12.49□□□□□ -0.41
VSX1-206ENST00000444511 ATP5LO75964 103 aa12.48□□□□□ -0.41
VSX1-206ENST00000444511 IFITM2Q01629 132 aa12.47□□□□□ -0.41
VSX1-206ENST00000444511 IGLV5-37A0A075B6J1 123 aa12.46□□□□□ -0.41
VSX1-206ENST00000444511 CRYGAP11844 174 aa12.45□□□□□ -0.42
VSX1-206ENST00000444511 NDUFA6P56556 154 aa12.45□□□□□ -0.42
VSX1-206ENST00000444511 A0A087X002 238 aa12.44□□□□□ -0.42
VSX1-206ENST00000444511 TSPAN13O95857 204 aa12.44□□□□□ -0.42
VSX1-206ENST00000444511 UBE2AP49459 152 aa12.44□□□□□ -0.42
VSX1-206ENST00000444511 COMMD7Q86VX2 200 aa12.44□□□□□ -0.42
VSX1-206ENST00000444511 RPS10P5Q9NQ39 176 aa12.44□□□□□ -0.42
VSX1-206ENST00000444511 IGLC3P0DOY3 106 aa12.43□□□□□ -0.42
VSX1-206ENST00000444511 PFN2P35080 140 aa12.43□□□□□ -0.42
VSX1-206ENST00000444511 RHEBQ15382 184 aa12.43□□□□□ -0.42
VSX1-206ENST00000444511 TYMSOSQ8TAI1 123 aa12.43□□□□□ -0.42
VSX1-206ENST00000444511 IGKV2-28A0A075B6P5 120 aa12.41□□□□□ -0.42
VSX1-206ENST00000444511 IGLV5-39A0A0G2JS06 123 aa12.41□□□□□ -0.42
VSX1-206ENST00000444511 IGKV2D-28P01615 120 aa12.41□□□□□ -0.42
VSX1-206ENST00000444511 A0A096LNJ9 63 aa12.4□□□□□ -0.42
VSX1-206ENST00000444511 SCO1O75880 301 aa12.39□□□□□ -0.43
VSX1-206ENST00000444511 ZNF22P17026 224 aaPredicted RBP12.39□□□□□ -0.43
VSX1-206ENST00000444511 C10orf91Q5T1B1 145 aa12.39□□□□□ -0.43
VSX1-206ENST00000444511 KRTAP13-1Q8IUC0 172 aa12.39□□□□□ -0.43
VSX1-206ENST00000444511 ANAPC11Q9NYG5 84 aa12.39□□□□□ -0.43
VSX1-206ENST00000444511 HBDP02042 147 aa12.38□□□□□ -0.43
VSX1-206ENST00000444511 LINC00614P0C842 121 aa12.38□□□□□ -0.43
VSX1-206ENST00000444511 ERG28Q9UKR5 140 aa12.38□□□□□ -0.43
VSX1-206ENST00000444511 TRAPPC1Q9Y5R8 145 aa12.38□□□□□ -0.43
VSX1-206ENST00000444511 C18orf32Q8TCD1 76 aa12.37□□□□□ -0.43
VSX1-206ENST00000444511 URB1-AS1Q96HZ7 61 aa12.37□□□□□ -0.43
VSX1-206ENST00000444511 SND1-IT1Q9HBX3 110 aa12.37□□□□□ -0.43
VSX1-206ENST00000444511 PMCHL1Q16048 86 aa12.36□□□□□ -0.43
VSX1-206ENST00000444511 VPREB1P12018 145 aa12.35□□□□□ -0.43
VSX1-206ENST00000444511 COX17Q14061 63 aa12.35□□□□□ -0.43
VSX1-206ENST00000444511 ZNF625Q96I27 306 aaPredicted RBP12.35□□□□□ -0.43
VSX1-206ENST00000444511 RPL24P83731 157 aaKnown RBP12.34□□□□□ -0.43
VSX1-206ENST00000444511 PRLHP81277 87 aa12.33□□□□□ -0.44
VSX1-206ENST00000444511 FAM229BQ4G0N7 80 aa12.33□□□□□ -0.44
VSX1-206ENST00000444511 KRTAP13-2Q52LG2 175 aa12.33□□□□□ -0.44
VSX1-206ENST00000444511 TMEM170BQ5T4T1 132 aa12.33□□□□□ -0.44
VSX1-206ENST00000444511 FAM19A1Q7Z5A9 133 aa12.33□□□□□ -0.44
VSX1-206ENST00000444511 BAGE3Q86Y29 109 aa12.33□□□□□ -0.44
VSX1-206ENST00000444511 C11orf86A6NJI1 115 aa12.32□□□□□ -0.44
VSX1-206ENST00000444511 SFTA2Q6UW10 78 aa12.32□□□□□ -0.44
VSX1-206ENST00000444511 TMEM126AQ9H061 195 aa12.32□□□□□ -0.44
VSX1-206ENST00000444511 TMEM238C9JI98 176 aa12.31□□□□□ -0.44
VSX1-206ENST00000444511 IGKV2D-26A0A0A0MRZ7 120 aa12.29□□□□□ -0.44
VSX1-206ENST00000444511 LINC00304Q8N9R0 145 aa12.28□□□□□ -0.44
VSX1-206ENST00000444511 M0R378 163 aa12.27□□□□□ -0.45
VSX1-206ENST00000444511 Q8NDZ9 215 aa12.27□□□□□ -0.45
VSX1-206ENST00000444511 CHTOPQ9Y3Y2 248 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms