RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 ANK3Q12955 4377 aaKnown RBP13.24□□□□□ -0.29
PAXBP1-204ENST00000443785 PKD1L1Q8TDX9 2849 aa13.24□□□□□ -0.29
PAXBP1-204ENST00000443785 NCR3O14931 201 aa13.24□□□□□ -0.29
PAXBP1-204ENST00000443785 DNAL4O96015 105 aa13.24□□□□□ -0.29
PAXBP1-204ENST00000443785 TRAV25A0A0B4J276 109 aa13.23□□□□□ -0.29
PAXBP1-204ENST00000443785 CSDC2Q9Y534 153 aaKnown RBP13.23□□□□□ -0.29
PAXBP1-204ENST00000443785 IGHV3OR16-9A0A0B4J2B5 98 aa13.22□□□□□ -0.29
PAXBP1-204ENST00000443785 IGKV3D-7A0A0C4DH55 119 aa13.22□□□□□ -0.29
PAXBP1-204ENST00000443785 PF4P02776 101 aa13.22□□□□□ -0.29
PAXBP1-204ENST00000443785 CSNK1G2-AS1Q8NCQ2 148 aa13.22□□□□□ -0.29
PAXBP1-204ENST00000443785 IGLV1-51P01701 117 aa13.21□□□□□ -0.29
PAXBP1-204ENST00000443785 LINC00959A0A1B0GUT2 108 aa13.2□□□□□ -0.3
PAXBP1-204ENST00000443785 HERV-K104P63124 156 aa13.2□□□□□ -0.3
PAXBP1-204ENST00000443785 DEFB135Q30KP9 77 aa13.2□□□□□ -0.3
PAXBP1-204ENST00000443785 SDIM1Q6ZPB5 146 aa13.2□□□□□ -0.3
PAXBP1-204ENST00000443785 TRBV6-4A0A1B0GX49 114 aa13.19□□□□□ -0.3
PAXBP1-204ENST00000443785 MALP21145 153 aa13.19□□□□□ -0.3
PAXBP1-204ENST00000443785 LINC00269Q8N2A0 174 aa13.19□□□□□ -0.3
PAXBP1-204ENST00000443785 SMIM20Q8N5G0 67 aa13.18□□□□□ -0.3
PAXBP1-204ENST00000443785 KRTAP10-3P60369 221 aa13.18□□□□□ -0.3
PAXBP1-204ENST00000443785 TRAV13-2A0A0B4J235 113 aa13.17□□□□□ -0.3
PAXBP1-204ENST00000443785 FAM222AQ5U5X8 452 aa13.16□□□□□ -0.3
PAXBP1-204ENST00000443785 KRTAP1-1Q07627 177 aa13.16□□□□□ -0.3
PAXBP1-204ENST00000443785 A0A087WVE0 104 aa13.15□□□□□ -0.3
PAXBP1-204ENST00000443785 ANGP03950 147 aaKnown RBP13.15□□□□□ -0.3
PAXBP1-204ENST00000443785 LRRC75A-AS1Q8N1F1 130 aa13.14□□□□□ -0.31
PAXBP1-204ENST00000443785 COPS9Q8WXC6 57 aa13.14□□□□□ -0.31
PAXBP1-204ENST00000443785 TRACP01848 142 aa13.14□□□□□ -0.31
PAXBP1-204ENST00000443785 CFAP161Q6P656 301 aa13.14□□□□□ -0.31
PAXBP1-204ENST00000443785 A0A087WZ39 114 aa13.13□□□□□ -0.31
PAXBP1-204ENST00000443785 RPL28P46779 137 aaKnown RBP13.12□□□□□ -0.31
PAXBP1-204ENST00000443785 KLK5Q9Y337 293 aaPredicted RBP13.12□□□□□ -0.31
PAXBP1-204ENST00000443785 C6orf223Q8N319 242 aa13.12□□□□□ -0.31
PAXBP1-204ENST00000443785 TMEM86BQ8N661 226 aa13.12□□□□□ -0.31
PAXBP1-204ENST00000443785 WFDC9Q8NEX5 89 aa13.12□□□□□ -0.31
PAXBP1-204ENST00000443785 DEFB121Q5J5C9 76 aa13.11□□□□□ -0.31
PAXBP1-204ENST00000443785 OVOL2Q9BRP0 275 aa13.11□□□□□ -0.31
PAXBP1-204ENST00000443785 FAM19A3Q7Z5A8 133 aa13.1□□□□□ -0.31
PAXBP1-204ENST00000443785 SS18Q15532 418 aa13.09□□□□□ -0.31
PAXBP1-204ENST00000443785 FAM240AA0A1B0GVK7 77 aa13.09□□□□□ -0.31
PAXBP1-204ENST00000443785 LINC01600Q96MT4 127 aa13.09□□□□□ -0.31
PAXBP1-204ENST00000443785 LINC00846Q9NV44 126 aa13.09□□□□□ -0.31
PAXBP1-204ENST00000443785 FLNBO75369 2602 aaKnown RBP13.08□□□□□ -0.31
PAXBP1-204ENST00000443785 Q6Q795 121 aa13.08□□□□□ -0.32
PAXBP1-204ENST00000443785 Q8NDZ9 215 aa13.07□□□□□ -0.32
PAXBP1-204ENST00000443785 IBA57-AS1B1ANH7 110 aa13.07□□□□□ -0.32
PAXBP1-204ENST00000443785 CXCL5P42830 114 aa13.06□□□□□ -0.32
PAXBP1-204ENST00000443785 X6R8D5 127 aa13.06□□□□□ -0.32
PAXBP1-204ENST00000443785 CELA1Q9UNI1 258 aa13.06□□□□□ -0.32
PAXBP1-204ENST00000443785 LINC00643Q86TS7 51 aa13.06□□□□□ -0.32
PAXBP1-204ENST00000443785 NSD1Q96L73 2696 aaPredicted RBP13.05□□□□□ -0.32
PAXBP1-204ENST00000443785 C10orf25Q5T742 122 aa13.05□□□□□ -0.32
PAXBP1-204ENST00000443785 CHCHD10Q8WYQ3 142 aaPredicted RBP13.05□□□□□ -0.32
PAXBP1-204ENST00000443785 NOTCH1P46531 2555 aa13.05□□□□□ -0.32
PAXBP1-204ENST00000443785 TRBV7-7A0A0K0K1E9 115 aa13.04□□□□□ -0.32
PAXBP1-204ENST00000443785 HIST1H4AP62805 103 aaKnown RBP13.04□□□□□ -0.32
PAXBP1-204ENST00000443785 C9orf153Q5TBE3 101 aa13.03□□□□□ -0.32
PAXBP1-204ENST00000443785 PRO0255Q9UI72 69 aa13.03□□□□□ -0.32
PAXBP1-204ENST00000443785 INAFM2P0DMQ5 153 aa13.02□□□□□ -0.32
PAXBP1-204ENST00000443785 UNQ6190/PRO20217Q6UXQ8 127 aa13.02□□□□□ -0.32
PAXBP1-204ENST00000443785 MAST4O15021 2626 aa13.01□□□□□ -0.33
PAXBP1-204ENST00000443785 FBN1P35555 2871 aaKnown RBP13.01□□□□□ -0.33
PAXBP1-204ENST00000443785 REG3AQ06141 175 aa13.01□□□□□ -0.33
PAXBP1-204ENST00000443785 F8P00451 2351 aa13.01□□□□□ -0.33
PAXBP1-204ENST00000443785 C6orf99Q4VX62 202 aa13.01□□□□□ -0.33
PAXBP1-204ENST00000443785 XAGE1AQ9HD64 81 aa13.01□□□□□ -0.33
PAXBP1-204ENST00000443785 KLK12Q9UKR0 248 aa13.01□□□□□ -0.33
PAXBP1-204ENST00000443785 STAB1Q9NY15 2570 aa13□□□□□ -0.33
PAXBP1-204ENST00000443785 ACYP1P07311 99 aa13□□□□□ -0.33
PAXBP1-204ENST00000443785 IGHV4-28A0A0C4DH34 117 aa12.99□□□□□ -0.33
PAXBP1-204ENST00000443785 HILS1P60008 231 aa12.99□□□□□ -0.33
PAXBP1-204ENST00000443785 DAD1P61803 113 aa12.99□□□□□ -0.33
PAXBP1-204ENST00000443785 MRPL23Q16540 153 aaKnown RBP12.99□□□□□ -0.33
PAXBP1-204ENST00000443785 CMC4P56277 68 aaPredicted RBP12.99□□□□□ -0.33
PAXBP1-204ENST00000443785 NANOS2P60321 138 aaKnown RBP12.98□□□□□ -0.33
PAXBP1-204ENST00000443785 INAFM1C9JVW0 142 aa12.98□□□□□ -0.33
PAXBP1-204ENST00000443785 S100A7L2Q5SY68 101 aa12.98□□□□□ -0.33
PAXBP1-204ENST00000443785 CYSTM1Q9H1C7 97 aa12.98□□□□□ -0.33
PAXBP1-204ENST00000443785 ORMDL1Q9P0S3 153 aa12.98□□□□□ -0.33
PAXBP1-204ENST00000443785 RPL18AQ02543 176 aaKnown RBP12.97□□□□□ -0.33
PAXBP1-204ENST00000443785 TENM3Q9P273 2699 aa12.97□□□□□ -0.33
PAXBP1-204ENST00000443785 H0YGX0 51 aa12.96□□□□□ -0.33
PAXBP1-204ENST00000443785 C16orf95Q9H693 158 aa12.96□□□□□ -0.33
PAXBP1-204ENST00000443785 hADV29S1A0JD25 119 aa12.95□□□□□ -0.34
PAXBP1-204ENST00000443785 KIAA0087Q14695 138 aa12.94□□□□□ -0.34
PAXBP1-204ENST00000443785 A0A1B0GX51 115 aa12.94□□□□□ -0.34
PAXBP1-204ENST00000443785 Q8IZM0 81 aa12.94□□□□□ -0.34
PAXBP1-204ENST00000443785 KIR2DL5BQ8NHK3 375 aa12.94□□□□□ -0.34
PAXBP1-204ENST00000443785 LOC107984640A0A0U1RRK4 108 aa12.93□□□□□ -0.34
PAXBP1-204ENST00000443785 LY6G6DO95868 133 aa12.93□□□□□ -0.34
PAXBP1-204ENST00000443785 HIGD2BQ4VC39 106 aa12.93□□□□□ -0.34
PAXBP1-204ENST00000443785 FAM110AQ9BQ89 295 aa12.93□□□□□ -0.34
PAXBP1-204ENST00000443785 BAHCC1Q9P281 2608 aa12.92□□□□□ -0.34
PAXBP1-204ENST00000443785 RETNQ9HD89 108 aa12.92□□□□□ -0.34
PAXBP1-204ENST00000443785 M0R2N4 97 aa12.92□□□□□ -0.34
PAXBP1-204ENST00000443785 SPAG11BQ08648 103 aa12.92□□□□□ -0.34
PAXBP1-204ENST00000443785 CD164L2Q6UWJ8 174 aa12.91□□□□□ -0.34
PAXBP1-204ENST00000443785 FAM19A1Q7Z5A9 133 aa12.91□□□□□ -0.34
PAXBP1-204ENST00000443785 Q8N814 137 aa12.91□□□□□ -0.34
PAXBP1-204ENST00000443785 TRAV23DV6A0A075B6W5 121 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms