RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 H3BUT2 72 aa9.83□□□□□ -0.84
LINC00299-202ENST00000442956 DYNC2H1Q8NCM8 4307 aaKnown RBP9.83□□□□□ -0.84
LINC00299-202ENST00000442956 CFC1BP0CG36 223 aa9.83□□□□□ -0.84
LINC00299-202ENST00000442956 CFC1P0CG37 223 aa9.83□□□□□ -0.84
LINC00299-202ENST00000442956 SFTA2Q6UW10 78 aa9.83□□□□□ -0.84
LINC00299-202ENST00000442956 KIAA0087Q14695 138 aa9.82□□□□□ -0.84
LINC00299-202ENST00000442956 VAMP3Q15836 100 aa9.82□□□□□ -0.84
LINC00299-202ENST00000442956 C2orf82Q6UX34 121 aa9.82□□□□□ -0.84
LINC00299-202ENST00000442956 EIF4EBP3O60516 100 aaPredicted RBP9.82□□□□□ -0.84
LINC00299-202ENST00000442956 IFITM1P13164 125 aa9.82□□□□□ -0.84
LINC00299-202ENST00000442956 CKS1BP61024 79 aa9.81□□□□□ -0.84
LINC00299-202ENST00000442956 CFAP161Q6P656 301 aa9.81□□□□□ -0.84
LINC00299-202ENST00000442956 KRTAP26-1Q6PEX3 210 aa9.81□□□□□ -0.84
LINC00299-202ENST00000442956 KLK5Q9Y337 293 aaPredicted RBP9.81□□□□□ -0.84
LINC00299-202ENST00000442956 LINC00308Q8TCZ7 52 aa9.8□□□□□ -0.84
LINC00299-202ENST00000442956 IBA57-AS1B1ANH7 110 aa9.79□□□□□ -0.84
LINC00299-202ENST00000442956 UPK3BQ9BT76 320 aa9.79□□□□□ -0.84
LINC00299-202ENST00000442956 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.79□□□□□ -0.84
LINC00299-202ENST00000442956 LINC00158P58513 81 aa9.79□□□□□ -0.84
LINC00299-202ENST00000442956 SPAG11BQ08648 103 aa9.79□□□□□ -0.84
LINC00299-202ENST00000442956 C1orf43Q9BWL3 253 aa9.79□□□□□ -0.84
LINC00299-202ENST00000442956 A0A1W2PPM0 123 aa9.78□□□□□ -0.84
LINC00299-202ENST00000442956 CXCL5P42830 114 aa9.78□□□□□ -0.84
LINC00299-202ENST00000442956 PGPEP1Q9NXJ5 209 aa9.78□□□□□ -0.84
LINC00299-202ENST00000442956 APLNQ9ULZ1 77 aa9.78□□□□□ -0.84
LINC00299-202ENST00000442956 CSMD3Q7Z407 3707 aa9.78□□□□□ -0.84
LINC00299-202ENST00000442956 TENM2Q9NT68 2774 aa9.78□□□□□ -0.84
LINC00299-202ENST00000442956 IGKV2D-24A0A075B6R9 120 aa9.78□□□□□ -0.84
LINC00299-202ENST00000442956 PFN2P35080 140 aa9.78□□□□□ -0.84
LINC00299-202ENST00000442956 SOSTDC1Q6X4U4 206 aa9.78□□□□□ -0.84
LINC00299-202ENST00000442956 MIR7-3HGQ8N6C7 128 aa9.78□□□□□ -0.84
LINC00299-202ENST00000442956 Q9HAA7 133 aa9.78□□□□□ -0.84
LINC00299-202ENST00000442956 PRO1854Q9UHT4 67 aa9.78□□□□□ -0.84
LINC00299-202ENST00000442956 ERG28Q9UKR5 140 aa9.78□□□□□ -0.84
LINC00299-202ENST00000442956 FBN3Q75N90 2809 aa9.77□□□□□ -0.84
LINC00299-202ENST00000442956 A0A0B4J2C4 111 aa9.77□□□□□ -0.85
LINC00299-202ENST00000442956 COPS9Q8WXC6 57 aa9.77□□□□□ -0.85
LINC00299-202ENST00000442956 LINC00526Q96FQ7 95 aa9.77□□□□□ -0.85
LINC00299-202ENST00000442956 PLECQ15149 4684 aaKnown RBP9.76□□□□□ -0.85
LINC00299-202ENST00000442956 C6orf223Q8N319 242 aa9.76□□□□□ -0.85
LINC00299-202ENST00000442956 DNAH7Q8WXX0 4024 aa9.76□□□□□ -0.85
LINC00299-202ENST00000442956 LYSTQ99698 3801 aa9.76□□□□□ -0.85
LINC00299-202ENST00000442956 TSPAN13O95857 204 aa9.76□□□□□ -0.85
LINC00299-202ENST00000442956 FABP2P12104 132 aa9.76□□□□□ -0.85
LINC00299-202ENST00000442956 NUPR2A6NF83 97 aa9.75□□□□□ -0.85
LINC00299-202ENST00000442956 UBE2V1Q13404 147 aa9.75□□□□□ -0.85
LINC00299-202ENST00000442956 DNAH1Q9P2D7 4330 aa9.75□□□□□ -0.85
LINC00299-202ENST00000442956 C10orf25Q5T742 122 aa9.73□□□□□ -0.85
LINC00299-202ENST00000442956 UNQ6190/PRO20217Q6UXQ8 127 aa9.73□□□□□ -0.85
LINC00299-202ENST00000442956 UBE2DNLQ8IWF7 75 aa9.73□□□□□ -0.85
LINC00299-202ENST00000442956 PPDPFQ9H3Y8 114 aa9.73□□□□□ -0.85
LINC00299-202ENST00000442956 GAGE10A6NGK3 116 aa9.72□□□□□ -0.85
LINC00299-202ENST00000442956 H7C2G1 150 aa9.72□□□□□ -0.85
LINC00299-202ENST00000442956 HIGD2BQ4VC39 106 aa9.72□□□□□ -0.85
LINC00299-202ENST00000442956 C9orf116Q5BN46 136 aaPredicted RBP9.72□□□□□ -0.85
LINC00299-202ENST00000442956 SPCS1Q9Y6A9 102 aa9.72□□□□□ -0.85
LINC00299-202ENST00000442956 C15orf56Q8N910 161 aa9.72□□□□□ -0.85
LINC00299-202ENST00000442956 NTN5Q8WTR8 489 aaPredicted RBP9.72□□□□□ -0.85
LINC00299-202ENST00000442956 ZNF561-AS1K7EIQ3 104 aa9.71□□□□□ -0.85
LINC00299-202ENST00000442956 K7EP34 96 aa9.71□□□□□ -0.86
LINC00299-202ENST00000442956 COX17Q14061 63 aa9.71□□□□□ -0.86
LINC00299-202ENST00000442956 STARD9Q9P2P6 4700 aa9.7□□□□□ -0.86
LINC00299-202ENST00000442956 GTF2H5Q6ZYL4 71 aa9.7□□□□□ -0.86
LINC00299-202ENST00000442956 SND1-IT1Q9HBX3 110 aa9.7□□□□□ -0.86
LINC00299-202ENST00000442956 LOC107984156A0A0G2JMH3 177 aa9.69□□□□□ -0.86
LINC00299-202ENST00000442956 Q1RN00 199 aa9.69□□□□□ -0.86
LINC00299-202ENST00000442956 ARL17AQ8IVW1 177 aa9.69□□□□□ -0.86
LINC00299-202ENST00000442956 RMI2Q96E14 147 aa9.68□□□□□ -0.86
LINC00299-202ENST00000442956 RPL13AP40429 203 aaKnown RBP9.68□□□□□ -0.86
LINC00299-202ENST00000442956 CAMK2N2Q96S95 79 aa9.68□□□□□ -0.86
LINC00299-202ENST00000442956 GVQW2A0A096LPI5 108 aaPredicted RBP9.67□□□□□ -0.86
LINC00299-202ENST00000442956 KRTAP1-5Q9BYS1 174 aa9.67□□□□□ -0.86
LINC00299-202ENST00000442956 PSMB2P49721 201 aa9.67□□□□□ -0.86
LINC00299-202ENST00000442956 C6orf48Q9UBA6 75 aa9.67□□□□□ -0.86
LINC00299-202ENST00000442956 CASC10Q5T4H9 136 aa9.66□□□□□ -0.86
LINC00299-202ENST00000442956 C2orf48Q96LS8 159 aa9.66□□□□□ -0.86
LINC00299-202ENST00000442956 TGP01266 2768 aa9.65□□□□□ -0.87
LINC00299-202ENST00000442956 IGKV2-28A0A075B6P5 120 aa9.65□□□□□ -0.87
LINC00299-202ENST00000442956 IGKV2D-28P01615 120 aa9.65□□□□□ -0.87
LINC00299-202ENST00000442956 Q6ZRU5 148 aa9.65□□□□□ -0.87
LINC00299-202ENST00000442956 TRBV30A0A0K0K1B3 111 aa9.64□□□□□ -0.87
LINC00299-202ENST00000442956 SCGB1C2P0DMR2 95 aa9.64□□□□□ -0.87
LINC00299-202ENST00000442956 LYRM7Q5U5X0 104 aa9.64□□□□□ -0.87
LINC00299-202ENST00000442956 USP17L23D6RBM5 183 aa9.64□□□□□ -0.87
LINC00299-202ENST00000442956 TRAV13-2A0A0B4J235 113 aa9.63□□□□□ -0.87
LINC00299-202ENST00000442956 TRIAP1O43715 76 aa9.63□□□□□ -0.87
LINC00299-202ENST00000442956 LINC00337Q8N6G1 96 aa9.63□□□□□ -0.87
LINC00299-202ENST00000442956 MUC7Q8TAX7 377 aa9.63□□□□□ -0.87
LINC00299-202ENST00000442956 VPS13DQ5THJ4 4388 aa9.63□□□□□ -0.87
LINC00299-202ENST00000442956 H3BMG7 143 aa9.62□□□□□ -0.87
LINC00299-202ENST00000442956 DNAH10Q8IVF4 4471 aa9.62□□□□□ -0.87
LINC00299-202ENST00000442956 F8WDY8 70 aa9.61□□□□□ -0.87
LINC00299-202ENST00000442956 LECT2O14960 151 aa9.61□□□□□ -0.87
LINC00299-202ENST00000442956 SYCNQ0VAF6 134 aa9.61□□□□□ -0.87
LINC00299-202ENST00000442956 TCL1BO95988 128 aa9.6□□□□□ -0.87
LINC00299-202ENST00000442956 TRBV20-1A0A075B6N2 111 aa9.59□□□□□ -0.87
LINC00299-202ENST00000442956 NDUFC2O95298 119 aa9.59□□□□□ -0.87
LINC00299-202ENST00000442956 PRR3P79522 188 aaKnown RBP9.59□□□□□ -0.87
LINC00299-202ENST00000442956 NBDYA0A0U1RRE5 68 aa9.59□□□□□ -0.87
LINC00299-202ENST00000442956 COX6CP09669 75 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms