RNA–Protein interactions for RNA: ENST00000441986.5

HDAC9-215, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-215ENST00000441986 PRELID3AQ96N28 172 aa3.98□□□□□ -1.77
HDAC9-215ENST00000441986 SPANXCQ9NY87 97 aa3.98□□□□□ -1.77
HDAC9-215ENST00000441986 KLK12Q9UKR0 248 aa3.98□□□□□ -1.77
HDAC9-215ENST00000441986 TMEM262E9PQX1 116 aa3.97□□□□□ -1.77
HDAC9-215ENST00000441986 GCHFRP30047 84 aa3.97□□□□□ -1.77
HDAC9-215ENST00000441986 ASIPP42127 132 aa3.97□□□□□ -1.77
HDAC9-215ENST00000441986 FXYD2P54710 66 aa3.97□□□□□ -1.77
HDAC9-215ENST00000441986 UBE2L3P68036 154 aaKnown RBP3.97□□□□□ -1.77
HDAC9-215ENST00000441986 GATD1Q8NB37 220 aa3.97□□□□□ -1.77
HDAC9-215ENST00000441986 RAB37Q96AX2 223 aa3.97□□□□□ -1.77
HDAC9-215ENST00000441986 UBE2WQ96B02 151 aa3.97□□□□□ -1.77
HDAC9-215ENST00000441986 CHCHD7Q9BUK0 85 aa3.97□□□□□ -1.77
HDAC9-215ENST00000441986 OTORQ9NRC9 128 aa3.97□□□□□ -1.77
HDAC9-215ENST00000441986 IFITM1P13164 125 aa3.96□□□□□ -1.78
HDAC9-215ENST00000441986 RPS28P62857 69 aaKnown RBP3.96□□□□□ -1.78
HDAC9-215ENST00000441986 PAPPA-AS1Q5QFB9 102 aa3.96□□□□□ -1.78
HDAC9-215ENST00000441986 GOLT1AQ6ZVE7 132 aa3.96□□□□□ -1.78
HDAC9-215ENST00000441986 TEN1Q86WV5 123 aa3.96□□□□□ -1.78
HDAC9-215ENST00000441986 C9orf163Q8N9P6 203 aa3.96□□□□□ -1.78
HDAC9-215ENST00000441986 NUP35Q8NFH5 326 aa3.96□□□□□ -1.78
HDAC9-215ENST00000441986 CARD19Q96LW7 228 aa3.96□□□□□ -1.78
HDAC9-215ENST00000441986 C9orf85Q96MD7 179 aa3.96□□□□□ -1.78
HDAC9-215ENST00000441986 LINC01600Q96MT4 127 aa3.96□□□□□ -1.78
HDAC9-215ENST00000441986 RNASE7Q9H1E1 156 aaKnown RBP3.96□□□□□ -1.78
HDAC9-215ENST00000441986 J3KT08 172 aa3.95□□□□□ -1.78
HDAC9-215ENST00000441986 K7ERJ3 54 aa3.95□□□□□ -1.78
HDAC9-215ENST00000441986 S100A4P26447 101 aaKnown RBP3.95□□□□□ -1.78
HDAC9-215ENST00000441986 HBBP68871 147 aa3.95□□□□□ -1.78
HDAC9-215ENST00000441986 CEND1Q8N111 149 aa3.95□□□□□ -1.78
HDAC9-215ENST00000441986 LINC00479Q96M42 142 aa3.95□□□□□ -1.78
HDAC9-215ENST00000441986 LRP2P98164 4655 aa3.94□□□□□ -1.78
HDAC9-215ENST00000441986 TNXBP22105 4242 aa3.94□□□□□ -1.78
HDAC9-215ENST00000441986 A8MWL6 223 aa3.94□□□□□ -1.78
HDAC9-215ENST00000441986 NCR2O95944 276 aa3.94□□□□□ -1.78
HDAC9-215ENST00000441986 CRPP02741 224 aa3.94□□□□□ -1.78
HDAC9-215ENST00000441986 LINC00694P0DN24 101 aa3.94□□□□□ -1.78
HDAC9-215ENST00000441986 VPREB1P12018 145 aa3.94□□□□□ -1.78
HDAC9-215ENST00000441986 RNASE3P12724 160 aaKnown RBP3.94□□□□□ -1.78
HDAC9-215ENST00000441986 ZNF80P51504 273 aaPredicted RBP3.94□□□□□ -1.78
HDAC9-215ENST00000441986 GAGE2BQ13066 116 aa3.94□□□□□ -1.78
HDAC9-215ENST00000441986 GAGE2EQ4V326 116 aa3.94□□□□□ -1.78
HDAC9-215ENST00000441986 ENHOQ6UWT2 76 aa3.94□□□□□ -1.78
HDAC9-215ENST00000441986 SDIM1Q6ZPB5 146 aa3.94□□□□□ -1.78
HDAC9-215ENST00000441986 GFRA4Q9GZZ7 299 aa3.94□□□□□ -1.78
HDAC9-215ENST00000441986 TMEM167BQ9NRX6 74 aa3.94□□□□□ -1.78
HDAC9-215ENST00000441986 GAGE2DQ9UEU5 116 aa3.94□□□□□ -1.78
HDAC9-215ENST00000441986 Q9UF83 564 aa3.94□□□□□ -1.78
HDAC9-215ENST00000441986 A0A096LNJ9 63 aa3.93□□□□□ -1.78
HDAC9-215ENST00000441986 TRBV10-1A0A0K0K1A3 114 aa3.93□□□□□ -1.78
HDAC9-215ENST00000441986 PRSS1P07477 247 aa3.93□□□□□ -1.78
HDAC9-215ENST00000441986 NMUP48645 174 aa3.93□□□□□ -1.78
HDAC9-215ENST00000441986 RPL36AP83881 106 aaKnown RBP3.93□□□□□ -1.78
HDAC9-215ENST00000441986 MIAQ16674 131 aa3.93□□□□□ -1.78
HDAC9-215ENST00000441986 MEIG1Q5JSS6 88 aa3.93□□□□□ -1.78
HDAC9-215ENST00000441986 PCP2Q8IVA1 136 aa3.93□□□□□ -1.78
HDAC9-215ENST00000441986 C14orf178Q8N769 122 aaPredicted RBP3.93□□□□□ -1.78
HDAC9-215ENST00000441986 OR13C6PQ8NH95 151 aa3.93□□□□□ -1.78
HDAC9-215ENST00000441986 RNF185Q96GF1 192 aa3.93□□□□□ -1.78
HDAC9-215ENST00000441986 SGK494Q96LW2 274 aa3.93□□□□□ -1.78
HDAC9-215ENST00000441986 SPANXDQ9BXN6 97 aa3.93□□□□□ -1.78
HDAC9-215ENST00000441986 TRBV7-3A0A075B6L6 115 aa3.92□□□□□ -1.78
HDAC9-215ENST00000441986 ANGP03950 147 aaKnown RBP3.92□□□□□ -1.78
HDAC9-215ENST00000441986 TCRAP04437 139 aa3.92□□□□□ -1.78
HDAC9-215ENST00000441986 UBE2D3P61077 147 aa3.92□□□□□ -1.78
HDAC9-215ENST00000441986 UBE2D2P62837 147 aa3.92□□□□□ -1.78
HDAC9-215ENST00000441986 GNG5P63218 68 aa3.92□□□□□ -1.78
HDAC9-215ENST00000441986 GAGE2AQ6NT46 116 aa3.92□□□□□ -1.78
HDAC9-215ENST00000441986 PRNTQ86SH4 94 aa3.92□□□□□ -1.78
HDAC9-215ENST00000441986 TMEM75Q8N9X5 138 aa3.92□□□□□ -1.78
HDAC9-215ENST00000441986 KIR2DL4Q99706 377 aa3.92□□□□□ -1.78
HDAC9-215ENST00000441986 JPT2Q9H910 190 aa3.92□□□□□ -1.78
HDAC9-215ENST00000441986 NHP2Q9NX24 153 aaKnown RBP3.92□□□□□ -1.78
HDAC9-215ENST00000441986 IGHV3-64A0A075B6Q5 118 aa3.91□□□□□ -1.78
HDAC9-215ENST00000441986 TRBV6-8A0A0A6YYG3 113 aa3.91□□□□□ -1.78
HDAC9-215ENST00000441986 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.91□□□□□ -1.78
HDAC9-215ENST00000441986 IGKV3D-20A0A0C4DH25 116 aa3.91□□□□□ -1.78
HDAC9-215ENST00000441986 TRBV7-7A0A0K0K1E9 115 aa3.91□□□□□ -1.78
HDAC9-215ENST00000441986 LINC01546A6NGU7 62 aa3.91□□□□□ -1.78
HDAC9-215ENST00000441986 HIGD1CA8MV81 97 aa3.91□□□□□ -1.78
HDAC9-215ENST00000441986 SNCGO76070 127 aa3.91□□□□□ -1.78
HDAC9-215ENST00000441986 CIRBPQ14011 172 aaKnown RBP3.91□□□□□ -1.78
HDAC9-215ENST00000441986 FAM74A4Q5TZK3 123 aa3.91□□□□□ -1.78
HDAC9-215ENST00000441986 LYRM7Q5U5X0 104 aa3.91□□□□□ -1.78
HDAC9-215ENST00000441986 FAM19A5Q7Z5A7 132 aaPredicted RBP3.91□□□□□ -1.78
HDAC9-215ENST00000441986 C7orf33Q8WU49 177 aa3.91□□□□□ -1.78
HDAC9-215ENST00000441986 EPDR1Q9UM22 224 aa3.91□□□□□ -1.78
HDAC9-215ENST00000441986 IGLV5-37A0A075B6J1 123 aa3.9□□□□□ -1.79
HDAC9-215ENST00000441986 TRBV20-1A0A075B6N2 111 aa3.9□□□□□ -1.79
HDAC9-215ENST00000441986 TRBV25-1A0A075B6N4 114 aa3.9□□□□□ -1.79
HDAC9-215ENST00000441986 A0A087WYN8 130 aa3.9□□□□□ -1.79
HDAC9-215ENST00000441986 C19orf71A6NCJ1 209 aa3.9□□□□□ -1.79
HDAC9-215ENST00000441986 C9JAW5 83 aa3.9□□□□□ -1.79
HDAC9-215ENST00000441986 PANO1I0J062 215 aa3.9□□□□□ -1.79
HDAC9-215ENST00000441986 PRSS2P07478 247 aa3.9□□□□□ -1.79
HDAC9-215ENST00000441986 ARMS2P0C7Q2 107 aa3.9□□□□□ -1.79
HDAC9-215ENST00000441986 FOXA3P55318 350 aaPredicted RBP3.9□□□□□ -1.79
HDAC9-215ENST00000441986 CNBPP62633 177 aaKnown RBP3.9□□□□□ -1.79
HDAC9-215ENST00000441986 CACNG7P62955 275 aa3.9□□□□□ -1.79
HDAC9-215ENST00000441986 Q75L30 129 aa3.9□□□□□ -1.79
HDAC9-215ENST00000441986 TMEM101Q96IK0 257 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms