RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 ZC2HC1BQ5TFG8 222 aa7□□□□□ -1.29
UBE2D4-204ENST00000440899 LINC00173Q6ZV60 143 aa7□□□□□ -1.29
UBE2D4-204ENST00000440899 K7EMI3 77 aa6.99□□□□□ -1.29
UBE2D4-204ENST00000440899 MT-ND4LP03901 98 aa6.99□□□□□ -1.29
UBE2D4-204ENST00000440899 PNRC1Q12796 327 aaPredicted RBP6.99□□□□□ -1.29
UBE2D4-204ENST00000440899 ANAPC16Q96DE5 110 aa6.99□□□□□ -1.29
UBE2D4-204ENST00000440899 TOMM7Q9P0U1 55 aa6.99□□□□□ -1.29
UBE2D4-204ENST00000440899 IGIPA6NJ69 53 aa6.98□□□□□ -1.29
UBE2D4-204ENST00000440899 RPL13AP40429 203 aaKnown RBP6.98□□□□□ -1.29
UBE2D4-204ENST00000440899 PAPPA-AS1Q5QFB9 102 aa6.98□□□□□ -1.29
UBE2D4-204ENST00000440899 FAM19A3Q7Z5A8 133 aa6.98□□□□□ -1.29
UBE2D4-204ENST00000440899 Q8IZM0 81 aa6.98□□□□□ -1.29
UBE2D4-204ENST00000440899 C12orf57Q99622 126 aa6.98□□□□□ -1.29
UBE2D4-204ENST00000440899 ALKBH7Q9BT30 221 aaPredicted RBP6.98□□□□□ -1.29
UBE2D4-204ENST00000440899 NXT2Q9NPJ8 142 aaKnown RBP6.98□□□□□ -1.29
UBE2D4-204ENST00000440899 ZNF861PO60384 105 aa6.97□□□□□ -1.29
UBE2D4-204ENST00000440899 G0S2P27469 103 aa6.97□□□□□ -1.29
UBE2D4-204ENST00000440899 HERVK_113P63121 156 aa6.97□□□□□ -1.29
UBE2D4-204ENST00000440899 SEC11AP67812 179 aa6.97□□□□□ -1.29
UBE2D4-204ENST00000440899 CARHSP1Q9Y2V2 147 aaKnown RBP6.97□□□□□ -1.29
UBE2D4-204ENST00000440899 NUPR1O60356 82 aa6.96□□□□□ -1.3
UBE2D4-204ENST00000440899 SMIM6P0DI80 62 aa6.96□□□□□ -1.3
UBE2D4-204ENST00000440899 AKR1D1P51857 326 aa6.96□□□□□ -1.3
UBE2D4-204ENST00000440899 LBHQ53QV2 105 aaPredicted RBP6.96□□□□□ -1.3
UBE2D4-204ENST00000440899 UQCC3Q6UW78 93 aa6.96□□□□□ -1.3
UBE2D4-204ENST00000440899 CTDSP1Q9GZU7 261 aa6.96□□□□□ -1.3
UBE2D4-204ENST00000440899 CDKN2A-AS1Q9UH64 79 aa6.96□□□□□ -1.3
UBE2D4-204ENST00000440899 C22orf24Q9Y442 160 aa6.96□□□□□ -1.3
UBE2D4-204ENST00000440899 F8VRH5 84 aa6.95□□□□□ -1.3
UBE2D4-204ENST00000440899 GEMIN7Q9H840 131 aaKnown RBP6.95□□□□□ -1.3
UBE2D4-204ENST00000440899 XAGE1AQ9HD64 81 aa6.95□□□□□ -1.3
UBE2D4-204ENST00000440899 S100PP25815 95 aa6.94□□□□□ -1.3
UBE2D4-204ENST00000440899 TIMM17AQ99595 171 aa6.94□□□□□ -1.3
UBE2D4-204ENST00000440899 TP73-AS1Q9UF72 201 aa6.94□□□□□ -1.3
UBE2D4-204ENST00000440899 CXCL5P42830 114 aa6.93□□□□□ -1.3
UBE2D4-204ENST00000440899 PRR4Q16378 134 aa6.93□□□□□ -1.3
UBE2D4-204ENST00000440899 SVBPQ8N300 66 aa6.93□□□□□ -1.3
UBE2D4-204ENST00000440899 TOMM6Q96B49 74 aa6.93□□□□□ -1.3
UBE2D4-204ENST00000440899 ERASQ7Z444 233 aa6.92□□□□□ -1.3
UBE2D4-204ENST00000440899 MRPL55Q7Z7F7 128 aaKnown RBP6.92□□□□□ -1.3
UBE2D4-204ENST00000440899 APOC3P02656 99 aa6.91□□□□□ -1.3
UBE2D4-204ENST00000440899 RPL28P46779 137 aaKnown RBP6.91□□□□□ -1.3
UBE2D4-204ENST00000440899 SCGB3A1Q96QR1 104 aa6.91□□□□□ -1.3
UBE2D4-204ENST00000440899 MUC2Q02817 5179 aa6.91□□□□□ -1.3
UBE2D4-204ENST00000440899 TINCRA0A1B0GVN0 87 aa6.9□□□□□ -1.3
UBE2D4-204ENST00000440899 LINC01549A6NIU2 74 aa6.9□□□□□ -1.3
UBE2D4-204ENST00000440899 SMIM1B2RUZ4 78 aa6.9□□□□□ -1.3
UBE2D4-204ENST00000440899 BCE1O60756 84 aa6.9□□□□□ -1.3
UBE2D4-204ENST00000440899 RAB5BP61020 215 aa6.9□□□□□ -1.3
UBE2D4-204ENST00000440899 KIAA1644Q3SXP7 199 aa6.9□□□□□ -1.3
UBE2D4-204ENST00000440899 PDZD11Q5EBL8 140 aa6.9□□□□□ -1.3
UBE2D4-204ENST00000440899 COX7B2Q8TF08 81 aa6.89□□□□□ -1.31
UBE2D4-204ENST00000440899 LINC00167Q96N53 147 aa6.89□□□□□ -1.31
UBE2D4-204ENST00000440899 TRAV9-1A0A075B6T8 112 aa6.88□□□□□ -1.31
UBE2D4-204ENST00000440899 CRYGAP11844 174 aa6.88□□□□□ -1.31
UBE2D4-204ENST00000440899 ADCYAP1P18509 176 aa6.88□□□□□ -1.31
UBE2D4-204ENST00000440899 IGLV5-45A0A087WSX0 123 aa6.87□□□□□ -1.31
UBE2D4-204ENST00000440899 RPL37AP8A6NKH3 93 aa6.87□□□□□ -1.31
UBE2D4-204ENST00000440899 TSPAN13O95857 204 aa6.87□□□□□ -1.31
UBE2D4-204ENST00000440899 CST9LQ9H4G1 147 aa6.87□□□□□ -1.31
UBE2D4-204ENST00000440899 A0A087X002 238 aa6.86□□□□□ -1.31
UBE2D4-204ENST00000440899 LINC01546A6NGU7 62 aa6.86□□□□□ -1.31
UBE2D4-204ENST00000440899 TYMSOSQ8TAI1 123 aa6.86□□□□□ -1.31
UBE2D4-204ENST00000440899 GNB1LQ9BYB4 327 aa6.86□□□□□ -1.31
UBE2D4-204ENST00000440899 IGLV5-37A0A075B6J1 123 aa6.85□□□□□ -1.31
UBE2D4-204ENST00000440899 GAGE10A6NGK3 116 aa6.85□□□□□ -1.31
UBE2D4-204ENST00000440899 LINC00587B1AMM8 73 aa6.85□□□□□ -1.31
UBE2D4-204ENST00000440899 PMVKQ15126 192 aa6.85□□□□□ -1.31
UBE2D4-204ENST00000440899 NKAPP1Q8N9T2 125 aa6.85□□□□□ -1.31
UBE2D4-204ENST00000440899 MRPL18Q9H0U6 180 aaKnown RBP6.85□□□□□ -1.31
UBE2D4-204ENST00000440899 TMEM218A2RU14 115 aa6.84□□□□□ -1.31
UBE2D4-204ENST00000440899 H3BRM9 83 aa6.84□□□□□ -1.31
UBE2D4-204ENST00000440899 SPINK8P0C7L1 97 aa6.84□□□□□ -1.31
UBE2D4-204ENST00000440899 UBE2AP49459 152 aa6.83□□□□□ -1.32
UBE2D4-204ENST00000440899 C10orf91Q5T1B1 145 aa6.83□□□□□ -1.32
UBE2D4-204ENST00000440899 FA2HQ7L5A8 372 aa6.83□□□□□ -1.32
UBE2D4-204ENST00000440899 KRTAP13-1Q8IUC0 172 aa6.83□□□□□ -1.32
UBE2D4-204ENST00000440899 SEC11CQ9BY50 192 aa6.83□□□□□ -1.32
UBE2D4-204ENST00000440899 SMCO4Q9NRQ5 59 aa6.83□□□□□ -1.32
UBE2D4-204ENST00000440899 ATP5LO75964 103 aa6.82□□□□□ -1.32
UBE2D4-204ENST00000440899 COX19Q49B96 90 aa6.82□□□□□ -1.32
UBE2D4-204ENST00000440899 ANAPC11Q9NYG5 84 aa6.82□□□□□ -1.32
UBE2D4-204ENST00000440899 A0A0U1RQV1 116 aa6.81□□□□□ -1.32
UBE2D4-204ENST00000440899 FABP9Q0Z7S8 132 aa6.81□□□□□ -1.32
UBE2D4-204ENST00000440899 FAM229BQ4G0N7 80 aa6.81□□□□□ -1.32
UBE2D4-204ENST00000440899 KRTAP13-2Q52LG2 175 aa6.81□□□□□ -1.32
UBE2D4-204ENST00000440899 IGKV2-28A0A075B6P5 120 aa6.8□□□□□ -1.32
UBE2D4-204ENST00000440899 IGLV5-39A0A0G2JS06 123 aa6.8□□□□□ -1.32
UBE2D4-204ENST00000440899 C5orf52A6NGY3 159 aa6.8□□□□□ -1.32
UBE2D4-204ENST00000440899 IGKV2D-28P01615 120 aa6.8□□□□□ -1.32
UBE2D4-204ENST00000440899 PFN2P35080 140 aa6.8□□□□□ -1.32
UBE2D4-204ENST00000440899 IGLC3P0DOY3 106 aa6.79□□□□□ -1.32
UBE2D4-204ENST00000440899 VPREB1P12018 145 aa6.78□□□□□ -1.32
UBE2D4-204ENST00000440899 NDUFA6P56556 154 aa6.78□□□□□ -1.32
UBE2D4-204ENST00000440899 RPL24P83731 157 aaKnown RBP6.78□□□□□ -1.32
UBE2D4-204ENST00000440899 COX17Q14061 63 aa6.78□□□□□ -1.32
UBE2D4-204ENST00000440899 SND1-IT1Q9HBX3 110 aa6.78□□□□□ -1.32
UBE2D4-204ENST00000440899 CBY1Q9Y3M2 126 aa6.78□□□□□ -1.32
UBE2D4-204ENST00000440899 IGKV2D-26A0A0A0MRZ7 120 aa6.77□□□□□ -1.33
UBE2D4-204ENST00000440899 ZNF22P17026 224 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms