RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 C1orf43Q9BWL3 253 aa12.77□□□□□ -0.37
SNX17-203ENST00000440760 LINC01561Q8N1V8 128 aa12.76□□□□□ -0.37
SNX17-203ENST00000440760 A0A0U1RRA0 63 aa12.76□□□□□ -0.37
SNX17-203ENST00000440760 ADAMTSL4-AS1Q5T5F5 129 aa12.76□□□□□ -0.37
SNX17-203ENST00000440760 KRTAP1-5Q9BYS1 174 aa12.76□□□□□ -0.37
SNX17-203ENST00000440760 IBA57-AS1B1ANH7 110 aa12.75□□□□□ -0.37
SNX17-203ENST00000440760 PRSS2P07478 247 aa12.75□□□□□ -0.37
SNX17-203ENST00000440760 C2orf82Q6UX34 121 aa12.75□□□□□ -0.37
SNX17-203ENST00000440760 DAND5Q8N907 189 aa12.75□□□□□ -0.37
SNX17-203ENST00000440760 LINC00526Q96FQ7 95 aa12.75□□□□□ -0.37
SNX17-203ENST00000440760 SPANXB1Q9NS25 103 aaPredicted RBP12.75□□□□□ -0.37
SNX17-203ENST00000440760 TAL2Q16559 108 aa12.74□□□□□ -0.37
SNX17-203ENST00000440760 C6orf226Q5I0X4 101 aa12.74□□□□□ -0.37
SNX17-203ENST00000440760 Q8IZM0 81 aa12.74□□□□□ -0.37
SNX17-203ENST00000440760 VPS13DQ5THJ4 4388 aa12.74□□□□□ -0.37
SNX17-203ENST00000440760 TMEM238C9JI98 176 aa12.74□□□□□ -0.37
SNX17-203ENST00000440760 K7EP34 96 aa12.74□□□□□ -0.37
SNX17-203ENST00000440760 KIAA0087Q14695 138 aa12.74□□□□□ -0.37
SNX17-203ENST00000440760 DNAH10Q8IVF4 4471 aa12.73□□□□□ -0.37
SNX17-203ENST00000440760 NPC2P61916 151 aa12.73□□□□□ -0.37
SNX17-203ENST00000440760 MEIG1Q5JSS6 88 aa12.73□□□□□ -0.37
SNX17-203ENST00000440760 SPAG11BQ08648 103 aa12.72□□□□□ -0.37
SNX17-203ENST00000440760 TM2D2Q9BX73 214 aa12.72□□□□□ -0.37
SNX17-203ENST00000440760 C6orf223Q8N319 242 aa12.72□□□□□ -0.37
SNX17-203ENST00000440760 CFAP161Q6P656 301 aa12.71□□□□□ -0.37
SNX17-203ENST00000440760 MUC7Q8TAX7 377 aa12.71□□□□□ -0.37
SNX17-203ENST00000440760 H3BUT2 72 aa12.7□□□□□ -0.38
SNX17-203ENST00000440760 APOMO95445 188 aa12.7□□□□□ -0.38
SNX17-203ENST00000440760 SMIM13P0DJ93 91 aa12.7□□□□□ -0.38
SNX17-203ENST00000440760 HERV-K104P63124 156 aa12.7□□□□□ -0.38
SNX17-203ENST00000440760 K7ERJ3 54 aa12.7□□□□□ -0.38
SNX17-203ENST00000440760 HIGD2BQ4VC39 106 aa12.7□□□□□ -0.38
SNX17-203ENST00000440760 CKS1BP61024 79 aa12.69□□□□□ -0.38
SNX17-203ENST00000440760 CASC10Q5T4H9 136 aa12.69□□□□□ -0.38
SNX17-203ENST00000440760 C15orf56Q8N910 161 aa12.69□□□□□ -0.38
SNX17-203ENST00000440760 NHP2Q9NX24 153 aaKnown RBP12.69□□□□□ -0.38
SNX17-203ENST00000440760 MUSTN1Q8IVN3 82 aa12.69□□□□□ -0.38
SNX17-203ENST00000440760 SPANXDQ9BXN6 97 aa12.69□□□□□ -0.38
SNX17-203ENST00000440760 SPANXCQ9NY87 97 aa12.69□□□□□ -0.38
SNX17-203ENST00000440760 A0A1W2PPM0 123 aa12.68□□□□□ -0.38
SNX17-203ENST00000440760 EIF4EBP3O60516 100 aaPredicted RBP12.68□□□□□ -0.38
SNX17-203ENST00000440760 TIMM17BO60830 172 aa12.68□□□□□ -0.38
SNX17-203ENST00000440760 PFN2P35080 140 aa12.66□□□□□ -0.38
SNX17-203ENST00000440760 CIRBPQ14011 172 aaKnown RBP12.66□□□□□ -0.38
SNX17-203ENST00000440760 C10orf25Q5T742 122 aa12.66□□□□□ -0.38
SNX17-203ENST00000440760 FABP2P12104 132 aa12.65□□□□□ -0.38
SNX17-203ENST00000440760 C9orf116Q5BN46 136 aaPredicted RBP12.65□□□□□ -0.38
SNX17-203ENST00000440760 UNQ6190/PRO20217Q6UXQ8 127 aa12.65□□□□□ -0.38
SNX17-203ENST00000440760 WWC2-AS2Q96NR7 200 aa12.65□□□□□ -0.38
SNX17-203ENST00000440760 ERG28Q9UKR5 140 aa12.65□□□□□ -0.38
SNX17-203ENST00000440760 SPCS1Q9Y6A9 102 aa12.65□□□□□ -0.38
SNX17-203ENST00000440760 CXCL5P42830 114 aa12.64□□□□□ -0.39
SNX17-203ENST00000440760 RAB37Q96AX2 223 aa12.64□□□□□ -0.39
SNX17-203ENST00000440760 A4D1N5 150 aa12.63□□□□□ -0.39
SNX17-203ENST00000440760 LINC00158P58513 81 aa12.63□□□□□ -0.39
SNX17-203ENST00000440760 MIR7-3HGQ8N6C7 128 aa12.63□□□□□ -0.39
SNX17-203ENST00000440760 SFTA2Q6UW10 78 aa12.63□□□□□ -0.39
SNX17-203ENST00000440760 SOSTDC1Q6X4U4 206 aa12.63□□□□□ -0.39
SNX17-203ENST00000440760 LINC00308Q8TCZ7 52 aa12.62□□□□□ -0.39
SNX17-203ENST00000440760 NTN5Q8WTR8 489 aaPredicted RBP12.62□□□□□ -0.39
SNX17-203ENST00000440760 RMI2Q96E14 147 aa12.62□□□□□ -0.39
SNX17-203ENST00000440760 ZNF561-AS1K7EIQ3 104 aa12.61□□□□□ -0.39
SNX17-203ENST00000440760 LECT2O14960 151 aa12.61□□□□□ -0.39
SNX17-203ENST00000440760 TMEM238LA0A1B0GVL6 79 aa12.61□□□□□ -0.39
SNX17-203ENST00000440760 A6NJY4 79 aa12.61□□□□□ -0.39
SNX17-203ENST00000440760 NAA38Q9BRA0 125 aaKnown RBP12.61□□□□□ -0.39
SNX17-203ENST00000440760 KMT2AQ03164 3969 aa12.6□□□□□ -0.39
SNX17-203ENST00000440760 NBDYA0A0U1RRE5 68 aa12.6□□□□□ -0.39
SNX17-203ENST00000440760 RPL24P83731 157 aaKnown RBP12.6□□□□□ -0.39
SNX17-203ENST00000440760 USP17L23D6RBM5 183 aa12.59□□□□□ -0.39
SNX17-203ENST00000440760 GVQW2A0A096LPI5 108 aaPredicted RBP12.58□□□□□ -0.4
SNX17-203ENST00000440760 A0A1B0GWB2 263 aa12.58□□□□□ -0.4
SNX17-203ENST00000440760 M0R2N4 97 aa12.58□□□□□ -0.4
SNX17-203ENST00000440760 CFC1BP0CG36 223 aa12.58□□□□□ -0.4
SNX17-203ENST00000440760 CFC1P0CG37 223 aa12.58□□□□□ -0.4
SNX17-203ENST00000440760 CAMK2N2Q96S95 79 aa12.58□□□□□ -0.4
SNX17-203ENST00000440760 C6orf48Q9UBA6 75 aa12.58□□□□□ -0.4
SNX17-203ENST00000440760 IFITM1P13164 125 aa12.57□□□□□ -0.4
SNX17-203ENST00000440760 TTC32Q5I0X7 151 aa12.57□□□□□ -0.4
SNX17-203ENST00000440760 WFDC2Q14508 124 aa12.56□□□□□ -0.4
SNX17-203ENST00000440760 Q6ZRU5 148 aa12.56□□□□□ -0.4
SNX17-203ENST00000440760 PSCAO43653 123 aa12.54□□□□□ -0.4
SNX17-203ENST00000440760 ALMS1Q8TCU4 4167 aa12.54□□□□□ -0.4
SNX17-203ENST00000440760 C2orf48Q96LS8 159 aa12.53□□□□□ -0.4
SNX17-203ENST00000440760 F8W1H4 67 aa12.52□□□□□ -0.4
SNX17-203ENST00000440760 DNAH2Q9P225 4427 aa12.52□□□□□ -0.41
SNX17-203ENST00000440760 COX17Q14061 63 aa12.52□□□□□ -0.41
SNX17-203ENST00000440760 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.51□□□□□ -0.41
SNX17-203ENST00000440760 LY6G6CO95867 125 aa12.51□□□□□ -0.41
SNX17-203ENST00000440760 PGPEP1Q9NXJ5 209 aa12.51□□□□□ -0.41
SNX17-203ENST00000440760 A0A0B4J2C4 111 aa12.5□□□□□ -0.41
SNX17-203ENST00000440760 SLPIP03973 132 aa12.5□□□□□ -0.41
SNX17-203ENST00000440760 TRBV30A0A0K0K1B3 111 aa12.5□□□□□ -0.41
SNX17-203ENST00000440760 SYCNQ0VAF6 134 aa12.5□□□□□ -0.41
SNX17-203ENST00000440760 SND1-IT1Q9HBX3 110 aa12.5□□□□□ -0.41
SNX17-203ENST00000440760 H7C2G1 150 aa12.49□□□□□ -0.41
SNX17-203ENST00000440760 TSPAN13O95857 204 aa12.49□□□□□ -0.41
SNX17-203ENST00000440760 COPS9Q8WXC6 57 aa12.49□□□□□ -0.41
SNX17-203ENST00000440760 PRO1854Q9UHT4 67 aa12.49□□□□□ -0.41
SNX17-203ENST00000440760 DNAH6Q9C0G6 4158 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms