RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 OXLD1Q5BKU9 147 aa9.95□□□□□ -0.82
LIMD1-202ENST00000440097 LINC00643Q86TS7 51 aa9.95□□□□□ -0.82
LIMD1-202ENST00000440097 KIR2DL5BQ8NHK3 375 aa9.95□□□□□ -0.82
LIMD1-202ENST00000440097 CIRBPQ14011 172 aaKnown RBP9.94□□□□□ -0.82
LIMD1-202ENST00000440097 C3orf22Q8N5N4 141 aa9.94□□□□□ -0.82
LIMD1-202ENST00000440097 PRIMA1Q86XR5 153 aa9.94□□□□□ -0.82
LIMD1-202ENST00000440097 IGHV4-30-4P0DP06 118 aa9.93□□□□□ -0.82
LIMD1-202ENST00000440097 Q9H8V8 135 aa9.93□□□□□ -0.82
LIMD1-202ENST00000440097 IGKV3OR2-268A0A0C4DH90 116 aa9.93□□□□□ -0.82
LIMD1-202ENST00000440097 GYPEP15421 78 aa9.93□□□□□ -0.82
LIMD1-202ENST00000440097 A0A096LPF7 62 aa9.92□□□□□ -0.82
LIMD1-202ENST00000440097 COX6A2Q02221 97 aa9.92□□□□□ -0.82
LIMD1-202ENST00000440097 IGHV4-28A0A0C4DH34 117 aa9.92□□□□□ -0.82
LIMD1-202ENST00000440097 SOSTDC1Q6X4U4 206 aa9.92□□□□□ -0.82
LIMD1-202ENST00000440097 BAALC-AS2P0C853 105 aa9.92□□□□□ -0.82
LIMD1-202ENST00000440097 UQCRQO14949 82 aa9.91□□□□□ -0.82
LIMD1-202ENST00000440097 IGLV5-45A0A087WSX0 123 aa9.9□□□□□ -0.82
LIMD1-202ENST00000440097 TRBV6-8A0A0A6YYG3 113 aa9.9□□□□□ -0.82
LIMD1-202ENST00000440097 TIRAPP58753 221 aa9.9□□□□□ -0.82
LIMD1-202ENST00000440097 DAD1P61803 113 aa9.9□□□□□ -0.82
LIMD1-202ENST00000440097 KLK5Q9Y337 293 aaPredicted RBP9.9□□□□□ -0.82
LIMD1-202ENST00000440097 C22orf24Q9Y442 160 aa9.9□□□□□ -0.82
LIMD1-202ENST00000440097 LYRM9A8MSI8 78 aa9.9□□□□□ -0.83
LIMD1-202ENST00000440097 CDC42SE2Q9NRR3 84 aa9.9□□□□□ -0.83
LIMD1-202ENST00000440097 PRO0255Q9UI72 69 aa9.9□□□□□ -0.83
LIMD1-202ENST00000440097 HTN3P15516 51 aa9.89□□□□□ -0.83
LIMD1-202ENST00000440097 HERVK_113P63121 156 aa9.89□□□□□ -0.83
LIMD1-202ENST00000440097 SDIM1Q6ZPB5 146 aa9.89□□□□□ -0.83
LIMD1-202ENST00000440097 LINC00526Q96FQ7 95 aa9.89□□□□□ -0.83
LIMD1-202ENST00000440097 FAM218AQ96MZ4 157 aa9.89□□□□□ -0.83
LIMD1-202ENST00000440097 CSDC2Q9Y534 153 aaKnown RBP9.89□□□□□ -0.83
LIMD1-202ENST00000440097 PAX4O43316 350 aa9.89□□□□□ -0.83
LIMD1-202ENST00000440097 TRACP01848 142 aa9.89□□□□□ -0.83
LIMD1-202ENST00000440097 LINC00242Q5T6M2 205 aa9.89□□□□□ -0.83
LIMD1-202ENST00000440097 LINC00612Q8N6U2 182 aa9.88□□□□□ -0.83
LIMD1-202ENST00000440097 IGLV5-39A0A0G2JS06 123 aa9.88□□□□□ -0.83
LIMD1-202ENST00000440097 LOC107984640A0A0U1RRK4 108 aa9.88□□□□□ -0.83
LIMD1-202ENST00000440097 GAGE2AQ6NT46 116 aa9.88□□□□□ -0.83
LIMD1-202ENST00000440097 C5orf38Q86SI9 138 aa9.88□□□□□ -0.83
LIMD1-202ENST00000440097 ATP5G1P05496 136 aa9.86□□□□□ -0.83
LIMD1-202ENST00000440097 MIFP14174 115 aa9.86□□□□□ -0.83
LIMD1-202ENST00000440097 CXCL5P42830 114 aa9.86□□□□□ -0.83
LIMD1-202ENST00000440097 CELA1Q9UNI1 258 aa9.86□□□□□ -0.83
LIMD1-202ENST00000440097 PRB2P02812 416 aaPredicted RBP9.86□□□□□ -0.83
LIMD1-202ENST00000440097 Q9HAA7 133 aa9.86□□□□□ -0.83
LIMD1-202ENST00000440097 F5H768 121 aa9.86□□□□□ -0.83
LIMD1-202ENST00000440097 WIPF1O43516 503 aa9.86□□□□□ -0.83
LIMD1-202ENST00000440097 IGLV4-60A0A075B6I1 120 aa9.85□□□□□ -0.83
LIMD1-202ENST00000440097 SMIM1B2RUZ4 78 aa9.85□□□□□ -0.83
LIMD1-202ENST00000440097 COX7CP15954 63 aa9.85□□□□□ -0.83
LIMD1-202ENST00000440097 Q8NAQ8 132 aa9.85□□□□□ -0.83
LIMD1-202ENST00000440097 COPS9Q8WXC6 57 aa9.85□□□□□ -0.83
LIMD1-202ENST00000440097 SPART-AS1P0CW21 52 aa9.85□□□□□ -0.83
LIMD1-202ENST00000440097 C2orf48Q96LS8 159 aa9.84□□□□□ -0.83
LIMD1-202ENST00000440097 INAFM2P0DMQ5 153 aa9.84□□□□□ -0.83
LIMD1-202ENST00000440097 KRTAP10-11P60412 298 aa9.84□□□□□ -0.83
LIMD1-202ENST00000440097 MALP21145 153 aa9.82□□□□□ -0.84
LIMD1-202ENST00000440097 CLPSL2Q6UWE3 100 aa9.81□□□□□ -0.84
LIMD1-202ENST00000440097 RETNQ9HD89 108 aa9.81□□□□□ -0.84
LIMD1-202ENST00000440097 HIST1H4AP62805 103 aaKnown RBP9.81□□□□□ -0.84
LIMD1-202ENST00000440097 J3KT08 172 aa9.8□□□□□ -0.84
LIMD1-202ENST00000440097 TOMM7Q9P0U1 55 aa9.8□□□□□ -0.84
LIMD1-202ENST00000440097 CRYGAP11844 174 aa9.8□□□□□ -0.84
LIMD1-202ENST00000440097 hADV29S1A0JD25 119 aa9.8□□□□□ -0.84
LIMD1-202ENST00000440097 ATOX1O00244 68 aa9.8□□□□□ -0.84
LIMD1-202ENST00000440097 C9orf129Q5T035 196 aaKnown RBP9.8□□□□□ -0.84
LIMD1-202ENST00000440097 TENM3Q9P273 2699 aa9.79□□□□□ -0.84
LIMD1-202ENST00000440097 RPL28P46779 137 aaKnown RBP9.79□□□□□ -0.84
LIMD1-202ENST00000440097 FAM19A5Q7Z5A7 132 aaPredicted RBP9.79□□□□□ -0.84
LIMD1-202ENST00000440097 CYSTM1Q9H1C7 97 aa9.79□□□□□ -0.84
LIMD1-202ENST00000440097 CMYA5Q8N3K9 4069 aa9.78□□□□□ -0.84
LIMD1-202ENST00000440097 A0A1B0GX51 115 aa9.78□□□□□ -0.84
LIMD1-202ENST00000440097 FAM19A3Q7Z5A8 133 aa9.78□□□□□ -0.84
LIMD1-202ENST00000440097 IGKV3D-7A0A0C4DH55 119 aa9.78□□□□□ -0.84
LIMD1-202ENST00000440097 DNAL4O96015 105 aa9.78□□□□□ -0.84
LIMD1-202ENST00000440097 CRPP02741 224 aa9.78□□□□□ -0.84
LIMD1-202ENST00000440097 LINC00337Q8N6G1 96 aa9.78□□□□□ -0.84
LIMD1-202ENST00000440097 C14orf132Q9NPU4 83 aa9.78□□□□□ -0.84
LIMD1-202ENST00000440097 A0A087WYN8 130 aa9.77□□□□□ -0.84
LIMD1-202ENST00000440097 TRAV13-2A0A0B4J235 113 aa9.77□□□□□ -0.84
LIMD1-202ENST00000440097 XCL1P47992 114 aa9.77□□□□□ -0.85
LIMD1-202ENST00000440097 DNHD1Q96M86 4753 aa9.77□□□□□ -0.85
LIMD1-202ENST00000440097 MDFIQ99750 246 aa9.76□□□□□ -0.85
LIMD1-202ENST00000440097 RPL18AQ02543 176 aaKnown RBP9.76□□□□□ -0.85
LIMD1-202ENST00000440097 IGKV2-28A0A075B6P5 120 aa9.75□□□□□ -0.85
LIMD1-202ENST00000440097 IGKV2D-28P01615 120 aa9.75□□□□□ -0.85
LIMD1-202ENST00000440097 LINC00959A0A1B0GUT2 108 aa9.75□□□□□ -0.85
LIMD1-202ENST00000440097 EGFEM1PQ0D2K5 195 aa9.75□□□□□ -0.85
LIMD1-202ENST00000440097 MIR7-3HGQ8N6C7 128 aa9.75□□□□□ -0.85
LIMD1-202ENST00000440097 ANGP03950 147 aaKnown RBP9.75□□□□□ -0.85
LIMD1-202ENST00000440097 SS18Q15532 418 aa9.74□□□□□ -0.85
LIMD1-202ENST00000440097 SMIM11BQ8TCY0 68 aa9.74□□□□□ -0.85
LIMD1-202ENST00000440097 SND1-IT1Q9HBX3 110 aa9.74□□□□□ -0.85
LIMD1-202ENST00000440097 LINC00846Q9NV44 126 aa9.74□□□□□ -0.85
LIMD1-202ENST00000440097 A0A087WVE0 104 aa9.74□□□□□ -0.85
LIMD1-202ENST00000440097 C5orf47Q569G3 176 aa9.74□□□□□ -0.85
LIMD1-202ENST00000440097 LINC00269Q8N2A0 174 aa9.74□□□□□ -0.85
LIMD1-202ENST00000440097 Q8N3U1 123 aa9.74□□□□□ -0.85
LIMD1-202ENST00000440097 C11orf68Q9H3H3 251 aaKnown RBP9.74□□□□□ -0.85
LIMD1-202ENST00000440097 A0A1B0GUV1 79 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms