RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 SCGB1C2P0DMR2 95 aa3.32□□□□□ -1.88
EDEM3-203ENST00000439962 ETDBQ3ZM63 59 aa3.32□□□□□ -1.88
EDEM3-203ENST00000439962 LINC00242Q5T6M2 205 aa3.32□□□□□ -1.88
EDEM3-203ENST00000439962 OPRPNQ99935 248 aaPredicted RBP3.32□□□□□ -1.88
EDEM3-203ENST00000439962 PLAC8L1A1L4L8 177 aa3.31□□□□□ -1.88
EDEM3-203ENST00000439962 SLC25A20O43772 301 aa3.31□□□□□ -1.88
EDEM3-203ENST00000439962 LINC01620Q4KN68 170 aa3.31□□□□□ -1.88
EDEM3-203ENST00000439962 CEMP1Q6PRD7 247 aaPredicted RBP3.31□□□□□ -1.88
EDEM3-203ENST00000439962 UBE2DNLQ8IWF7 75 aa3.31□□□□□ -1.88
EDEM3-203ENST00000439962 ANKRD29Q8N6D5 301 aa3.31□□□□□ -1.88
EDEM3-203ENST00000439962 ZNF625Q96I27 306 aaPredicted RBP3.31□□□□□ -1.88
EDEM3-203ENST00000439962 ICOSQ9Y6W8 199 aa3.31□□□□□ -1.88
EDEM3-203ENST00000439962 PKHD1P08F94 4074 aa3.31□□□□□ -1.88
EDEM3-203ENST00000439962 SMIM1B2RUZ4 78 aa3.31□□□□□ -1.88
EDEM3-203ENST00000439962 UBE2L6O14933 153 aa3.31□□□□□ -1.88
EDEM3-203ENST00000439962 SPART-AS1P0CW21 52 aa3.31□□□□□ -1.88
EDEM3-203ENST00000439962 MIFP14174 115 aa3.31□□□□□ -1.88
EDEM3-203ENST00000439962 Q6ZTI0 123 aa3.31□□□□□ -1.88
EDEM3-203ENST00000439962 DEFB104AQ8WTQ1 72 aa3.31□□□□□ -1.88
EDEM3-203ENST00000439962 SRRM2Q9UQ35 2752 aaKnown RBP3.31□□□□□ -1.88
EDEM3-203ENST00000439962 DNAH10Q8IVF4 4471 aa3.3□□□□□ -1.88
EDEM3-203ENST00000439962 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.3□□□□□ -1.88
EDEM3-203ENST00000439962 A0A1B0GUV1 79 aa3.3□□□□□ -1.88
EDEM3-203ENST00000439962 IGKV2-29A2NJV5 120 aaPredicted RBP3.3□□□□□ -1.88
EDEM3-203ENST00000439962 LST1O00453 97 aa3.3□□□□□ -1.88
EDEM3-203ENST00000439962 CDKN2A-AS1Q9UH64 79 aa3.3□□□□□ -1.88
EDEM3-203ENST00000439962 LYRM9A8MSI8 78 aa3.3□□□□□ -1.88
EDEM3-203ENST00000439962 EIF4EBP3O60516 100 aaPredicted RBP3.3□□□□□ -1.88
EDEM3-203ENST00000439962 TRACP01848 142 aa3.3□□□□□ -1.88
EDEM3-203ENST00000439962 ACYP1P07311 99 aa3.3□□□□□ -1.88
EDEM3-203ENST00000439962 Q6Q795 121 aa3.3□□□□□ -1.88
EDEM3-203ENST00000439962 LINC00308Q8TCZ7 52 aa3.3□□□□□ -1.88
EDEM3-203ENST00000439962 TRAV13-2A0A0B4J235 113 aa3.3□□□□□ -1.88
EDEM3-203ENST00000439962 NUPR2A6NF83 97 aa3.3□□□□□ -1.88
EDEM3-203ENST00000439962 SPINK8P0C7L1 97 aa3.3□□□□□ -1.88
EDEM3-203ENST00000439962 C21orf62-AS1Q17RA5 79 aa3.3□□□□□ -1.88
EDEM3-203ENST00000439962 NTM-AS1Q6ZSK4 140 aa3.3□□□□□ -1.88
EDEM3-203ENST00000439962 SH2D6Q7Z4S9 175 aa3.3□□□□□ -1.88
EDEM3-203ENST00000439962 DNAH1Q9P2D7 4330 aa3.29□□□□□ -1.88
EDEM3-203ENST00000439962 TRBV6-8A0A0A6YYG3 113 aa3.29□□□□□ -1.88
EDEM3-203ENST00000439962 TRAV8-3A0A0A6YYJ7 113 aa3.29□□□□□ -1.88
EDEM3-203ENST00000439962 IBA57-AS1B1ANH7 110 aa3.29□□□□□ -1.88
EDEM3-203ENST00000439962 TRIAP1O43715 76 aa3.29□□□□□ -1.88
EDEM3-203ENST00000439962 Q1RN00 199 aa3.29□□□□□ -1.88
EDEM3-203ENST00000439962 LINC00476Q8WZB0 136 aa3.29□□□□□ -1.88
EDEM3-203ENST00000439962 LCE6AA0A183 80 aa3.29□□□□□ -1.88
EDEM3-203ENST00000439962 A0A1B0GV72 72 aa3.29□□□□□ -1.88
EDEM3-203ENST00000439962 COX7A2LO14548 114 aa3.29□□□□□ -1.88
EDEM3-203ENST00000439962 FUSP35637 526 aaKnown RBP eCLIP3.29□□□□□ -1.88
EDEM3-203ENST00000439962 CXCL5P42830 114 aa3.29□□□□□ -1.88
EDEM3-203ENST00000439962 FHL2Q14192 279 aa3.29□□□□□ -1.88
EDEM3-203ENST00000439962 ADAMTSL4-AS1Q5T5F5 129 aa3.29□□□□□ -1.88
EDEM3-203ENST00000439962 A0A087WZ39 114 aa3.28□□□□□ -1.88
EDEM3-203ENST00000439962 TRAV10A0A0B4J240 114 aa3.28□□□□□ -1.88
EDEM3-203ENST00000439962 TRGV4A0A0C4DH28 118 aa3.28□□□□□ -1.88
EDEM3-203ENST00000439962 C9JAW5 83 aa3.28□□□□□ -1.88
EDEM3-203ENST00000439962 COX7B2Q8TF08 81 aa3.28□□□□□ -1.88
EDEM3-203ENST00000439962 UBE2WQ96B02 151 aa3.28□□□□□ -1.88
EDEM3-203ENST00000439962 CDIP1Q9H305 208 aa3.28□□□□□ -1.88
EDEM3-203ENST00000439962 Q9H8V8 135 aa3.28□□□□□ -1.88
EDEM3-203ENST00000439962 A0A1B0GX51 115 aa3.28□□□□□ -1.88
EDEM3-203ENST00000439962 PRSS2P07478 247 aa3.28□□□□□ -1.88
EDEM3-203ENST00000439962 RPL28P46779 137 aaKnown RBP3.28□□□□□ -1.88
EDEM3-203ENST00000439962 MEIG1Q5JSS6 88 aa3.28□□□□□ -1.88
EDEM3-203ENST00000439962 IGHV3-64A0A075B6Q5 118 aa3.27□□□□□ -1.89
EDEM3-203ENST00000439962 IGHV3-38A0A0C4DH36 116 aa3.27□□□□□ -1.89
EDEM3-203ENST00000439962 H0YGX0 51 aa3.27□□□□□ -1.89
EDEM3-203ENST00000439962 COX6A2Q02221 97 aa3.27□□□□□ -1.89
EDEM3-203ENST00000439962 COX17Q14061 63 aa3.27□□□□□ -1.89
EDEM3-203ENST00000439962 C2orf82Q6UX34 121 aa3.27□□□□□ -1.89
EDEM3-203ENST00000439962 DNAH2Q9P225 4427 aa3.27□□□□□ -1.89
EDEM3-203ENST00000439962 IGHV3OR16-9A0A0B4J2B5 98 aa3.27□□□□□ -1.89
EDEM3-203ENST00000439962 LOC100131303A0A0U1RQF7 123 aa3.27□□□□□ -1.89
EDEM3-203ENST00000439962 GAGE12JA6NER3 117 aa3.27□□□□□ -1.89
EDEM3-203ENST00000439962 GAGE4Q13068 117 aa3.27□□□□□ -1.89
EDEM3-203ENST00000439962 GAGE5Q13069 117 aa3.27□□□□□ -1.89
EDEM3-203ENST00000439962 Q8IZM0 81 aa3.27□□□□□ -1.89
EDEM3-203ENST00000439962 C11orf68Q9H3H3 251 aaKnown RBP3.27□□□□□ -1.89
EDEM3-203ENST00000439962 PRO0255Q9UI72 69 aa3.27□□□□□ -1.89
EDEM3-203ENST00000439962 ATP5G1P05496 136 aa3.26□□□□□ -1.89
EDEM3-203ENST00000439962 SS18Q15532 418 aa3.26□□□□□ -1.89
EDEM3-203ENST00000439962 IMUPQ9GZP8 106 aa3.26□□□□□ -1.89
EDEM3-203ENST00000439962 Q9UF83 564 aa3.26□□□□□ -1.89
EDEM3-203ENST00000439962 TRAV8-4A0A0B4J246 113 aa3.26□□□□□ -1.89
EDEM3-203ENST00000439962 NDUFC2O95298 119 aa3.26□□□□□ -1.89
EDEM3-203ENST00000439962 APLNQ9ULZ1 77 aa3.26□□□□□ -1.89
EDEM3-203ENST00000439962 H3BQ85 93 aa3.26□□□□□ -1.89
EDEM3-203ENST00000439962 INAFM2P0DMQ5 153 aa3.26□□□□□ -1.89
EDEM3-203ENST00000439962 RNASE13Q5GAN3 156 aaKnown RBP3.26□□□□□ -1.89
EDEM3-203ENST00000439962 DAND5Q8N907 189 aa3.26□□□□□ -1.89
EDEM3-203ENST00000439962 DYNC2H1Q8NCM8 4307 aaKnown RBP3.25□□□□□ -1.89
EDEM3-203ENST00000439962 TRAV13-1A0A0B4J241 112 aa3.25□□□□□ -1.89
EDEM3-203ENST00000439962 CRPP02741 224 aa3.25□□□□□ -1.89
EDEM3-203ENST00000439962 NTN5Q8WTR8 489 aaPredicted RBP3.25□□□□□ -1.89
EDEM3-203ENST00000439962 LINC00959A0A1B0GUT2 108 aa3.25□□□□□ -1.89
EDEM3-203ENST00000439962 H3BNG1 76 aa3.25□□□□□ -1.89
EDEM3-203ENST00000439962 PAX4O43316 350 aa3.25□□□□□ -1.89
EDEM3-203ENST00000439962 SDIM1Q6ZPB5 146 aa3.25□□□□□ -1.89
EDEM3-203ENST00000439962 F8WDY8 70 aa3.24□□□□□ -1.89
EDEM3-203ENST00000439962 CHCHD5Q9BSY4 110 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms