RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 Q6JHZ5 121 aa6.4□□□□□ -1.38
COPB1-202ENST00000439561 C4orf3Q8WVX3 66 aa6.4□□□□□ -1.38
COPB1-202ENST00000439561 TRBV6-8A0A0A6YYG3 113 aa6.39□□□□□ -1.39
COPB1-202ENST00000439561 ANGP03950 147 aaKnown RBP6.39□□□□□ -1.39
COPB1-202ENST00000439561 HRCT1Q6UXD1 115 aa6.39□□□□□ -1.39
COPB1-202ENST00000439561 ZNF462Q96JM2 2506 aa6.39□□□□□ -1.39
COPB1-202ENST00000439561 J3QLI3 93 aa6.39□□□□□ -1.39
COPB1-202ENST00000439561 CRYGAP11844 174 aa6.38□□□□□ -1.39
COPB1-202ENST00000439561 C6orf99Q4VX62 202 aa6.38□□□□□ -1.39
COPB1-202ENST00000439561 C16orf74Q96GX8 76 aa6.38□□□□□ -1.39
COPB1-202ENST00000439561 UPK3BQ9BT76 320 aa6.38□□□□□ -1.39
COPB1-202ENST00000439561 CYSTM1Q9H1C7 97 aa6.38□□□□□ -1.39
COPB1-202ENST00000439561 ZFHX3Q15911 3703 aa6.38□□□□□ -1.39
COPB1-202ENST00000439561 TMEM258P61165 79 aa6.38□□□□□ -1.39
COPB1-202ENST00000439561 C9orf116Q5BN46 136 aaPredicted RBP6.38□□□□□ -1.39
COPB1-202ENST00000439561 WFDC11Q8NEX6 87 aa6.38□□□□□ -1.39
COPB1-202ENST00000439561 A8MTW9 85 aa6.38□□□□□ -1.39
COPB1-202ENST00000439561 DEFB4AO15263 64 aa6.38□□□□□ -1.39
COPB1-202ENST00000439561 JMJD7-PLA2G4BH0Y9G9 81 aa6.37□□□□□ -1.39
COPB1-202ENST00000439561 SCXQ7RTU7 201 aa6.37□□□□□ -1.39
COPB1-202ENST00000439561 LINC00269Q8N2A0 174 aa6.37□□□□□ -1.39
COPB1-202ENST00000439561 LINC00959A0A1B0GUT2 108 aa6.37□□□□□ -1.39
COPB1-202ENST00000439561 TRBV6-4A0A1B0GX49 114 aa6.37□□□□□ -1.39
COPB1-202ENST00000439561 TMEM256-PLSCR3K7ERE1 68 aa6.37□□□□□ -1.39
COPB1-202ENST00000439561 LINC01561Q8N1V8 128 aa6.36□□□□□ -1.39
COPB1-202ENST00000439561 IGHV3OR16-9A0A0B4J2B5 98 aa6.36□□□□□ -1.39
COPB1-202ENST00000439561 CCKP06307 115 aa6.36□□□□□ -1.39
COPB1-202ENST00000439561 C22orf24Q9Y442 160 aa6.36□□□□□ -1.39
COPB1-202ENST00000439561 C2orf48Q96LS8 159 aa6.35□□□□□ -1.39
COPB1-202ENST00000439561 SNURFQ9Y675 71 aa6.35□□□□□ -1.39
COPB1-202ENST00000439561 NBEAL2Q6ZNJ1 2754 aa6.35□□□□□ -1.39
COPB1-202ENST00000439561 A0A087WZ39 114 aa6.35□□□□□ -1.39
COPB1-202ENST00000439561 IGHV4-31P0DP07 118 aa6.35□□□□□ -1.39
COPB1-202ENST00000439561 RBM3P98179 157 aaKnown RBP6.35□□□□□ -1.39
COPB1-202ENST00000439561 DPH3Q96FX2 82 aa6.35□□□□□ -1.39
COPB1-202ENST00000439561 C4orf26Q17RF5 130 aa6.35□□□□□ -1.39
COPB1-202ENST00000439561 TEX15Q9BXT5 2789 aa6.34□□□□□ -1.39
COPB1-202ENST00000439561 FBN2P35556 2912 aa6.34□□□□□ -1.39
COPB1-202ENST00000439561 CELSR2Q9HCU4 2923 aa6.34□□□□□ -1.39
COPB1-202ENST00000439561 Q8N814 137 aa6.34□□□□□ -1.39
COPB1-202ENST00000439561 UTP20O75691 2785 aaKnown RBP6.34□□□□□ -1.39
COPB1-202ENST00000439561 GCN1Q92616 2671 aaKnown RBP6.33□□□□□ -1.4
COPB1-202ENST00000439561 FAM236DA0A1B0GTK5 79 aa6.32□□□□□ -1.4
COPB1-202ENST00000439561 FAM236CP0DP71 79 aa6.32□□□□□ -1.4
COPB1-202ENST00000439561 TRAV25A0A0B4J276 109 aa6.32□□□□□ -1.4
COPB1-202ENST00000439561 FHL2Q14192 279 aa6.32□□□□□ -1.4
COPB1-202ENST00000439561 BBC3Q96PG8 261 aaPredicted RBP6.32□□□□□ -1.4
COPB1-202ENST00000439561 Q6ZQY7 126 aa6.31□□□□□ -1.4
COPB1-202ENST00000439561 CHCHD10Q8WYQ3 142 aaPredicted RBP6.31□□□□□ -1.4
COPB1-202ENST00000439561 KRTAP10-9P60411 292 aa6.31□□□□□ -1.4
COPB1-202ENST00000439561 XAGE1AQ9HD64 81 aa6.31□□□□□ -1.4
COPB1-202ENST00000439561 CSMD2Q7Z408 3487 aa6.31□□□□□ -1.4
COPB1-202ENST00000439561 DNAJC9-AS1A6NH13 148 aa6.31□□□□□ -1.4
COPB1-202ENST00000439561 NF1P21359 2839 aa6.3□□□□□ -1.4
COPB1-202ENST00000439561 CMC4P56277 68 aaPredicted RBP6.3□□□□□ -1.4
COPB1-202ENST00000439561 SPAG11BQ08648 103 aa6.3□□□□□ -1.4
COPB1-202ENST00000439561 Q8N3U1 123 aa6.29□□□□□ -1.4
COPB1-202ENST00000439561 MXRA5Q9NR99 2828 aa6.29□□□□□ -1.4
COPB1-202ENST00000439561 ATP5EP2Q5VTU8 51 aa6.29□□□□□ -1.4
COPB1-202ENST00000439561 Q8IZM0 81 aa6.29□□□□□ -1.4
COPB1-202ENST00000439561 VPS13CQ709C8 3753 aa6.29□□□□□ -1.4
COPB1-202ENST00000439561 DAD1P61803 113 aa6.29□□□□□ -1.4
COPB1-202ENST00000439561 REG3AQ06141 175 aa6.29□□□□□ -1.4
COPB1-202ENST00000439561 FAM19A3Q7Z5A8 133 aa6.29□□□□□ -1.4
COPB1-202ENST00000439561 C6orf223Q8N319 242 aa6.29□□□□□ -1.4
COPB1-202ENST00000439561 ZNF843Q8N446 348 aa6.29□□□□□ -1.4
COPB1-202ENST00000439561 C1orf43Q9BWL3 253 aa6.29□□□□□ -1.4
COPB1-202ENST00000439561 NDUFC2O95298 119 aa6.28□□□□□ -1.4
COPB1-202ENST00000439561 RPS28P62857 69 aaKnown RBP6.28□□□□□ -1.4
COPB1-202ENST00000439561 UNQ6190/PRO20217Q6UXQ8 127 aa6.28□□□□□ -1.4
COPB1-202ENST00000439561 CFAP46Q8IYW2 2715 aa6.28□□□□□ -1.4
COPB1-202ENST00000439561 PRO0255Q9UI72 69 aa6.28□□□□□ -1.4
COPB1-202ENST00000439561 KLK12Q9UKR0 248 aa6.28□□□□□ -1.4
COPB1-202ENST00000439561 RMI2Q96E14 147 aa6.27□□□□□ -1.4
COPB1-202ENST00000439561 DEFB135Q30KP9 77 aa6.27□□□□□ -1.41
COPB1-202ENST00000439561 DEFB113Q30KQ7 82 aa6.27□□□□□ -1.41
COPB1-202ENST00000439561 FLNAP21333 2647 aaKnown RBP6.27□□□□□ -1.41
COPB1-202ENST00000439561 LINC01006Q8NI28 216 aa6.27□□□□□ -1.41
COPB1-202ENST00000439561 F8WEM9 126 aa6.26□□□□□ -1.41
COPB1-202ENST00000439561 LINC00482Q8N8I6 264 aa6.26□□□□□ -1.41
COPB1-202ENST00000439561 DEFB105AQ8NG35 78 aa6.26□□□□□ -1.41
COPB1-202ENST00000439561 ZNF561-AS1K7EIQ3 104 aa6.26□□□□□ -1.41
COPB1-202ENST00000439561 CD164L2Q6UWJ8 174 aa6.26□□□□□ -1.41
COPB1-202ENST00000439561 IL17DQ8TAD2 202 aa6.25□□□□□ -1.41
COPB1-202ENST00000439561 GIG44P09565 113 aaPredicted RBP6.25□□□□□ -1.41
COPB1-202ENST00000439561 LINC01547P58512 204 aaPredicted RBP6.25□□□□□ -1.41
COPB1-202ENST00000439561 Q6ZVQ6 151 aa6.25□□□□□ -1.41
COPB1-202ENST00000439561 TRAV10A0A0B4J240 114 aa6.24□□□□□ -1.41
COPB1-202ENST00000439561 IGHV4-28A0A0C4DH34 117 aa6.24□□□□□ -1.41
COPB1-202ENST00000439561 OXTP01178 125 aa6.24□□□□□ -1.41
COPB1-202ENST00000439561 HIGD2BQ4VC39 106 aa6.24□□□□□ -1.41
COPB1-202ENST00000439561 DIRC1Q969H9 104 aa6.24□□□□□ -1.41
COPB1-202ENST00000439561 PKIGQ9Y2B9 76 aa6.24□□□□□ -1.41
COPB1-202ENST00000439561 PLAC8L1A1L4L8 177 aa6.24□□□□□ -1.41
COPB1-202ENST00000439561 M0R2N4 97 aa6.24□□□□□ -1.41
COPB1-202ENST00000439561 C10orf25Q5T742 122 aa6.24□□□□□ -1.41
COPB1-202ENST00000439561 LINC00575Q6W349 94 aa6.24□□□□□ -1.41
COPB1-202ENST00000439561 MPLKIPQ8TAP9 179 aa6.24□□□□□ -1.41
COPB1-202ENST00000439561 TRAV7A0A075B6U4 112 aa6.23□□□□□ -1.41
COPB1-202ENST00000439561 CYSRT1A8MQ03 144 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms