RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 K7EQD1 137 aa9.56□□□□□ -0.88
PCNX3-202ENST00000439247 LY6G6DO95868 133 aa9.56□□□□□ -0.88
PCNX3-202ENST00000439247 CCL18P55774 89 aa9.56□□□□□ -0.88
PCNX3-202ENST00000439247 COPS9Q8WXC6 57 aa9.56□□□□□ -0.88
PCNX3-202ENST00000439247 DYNLRB2Q8TF09 96 aa9.55□□□□□ -0.88
PCNX3-202ENST00000439247 WFDC9Q8NEX5 89 aa9.55□□□□□ -0.88
PCNX3-202ENST00000439247 OR13C6PQ8NH95 151 aa9.55□□□□□ -0.88
PCNX3-202ENST00000439247 COX7B2Q8TF08 81 aa9.55□□□□□ -0.88
PCNX3-202ENST00000439247 ESM1Q9NQ30 184 aa9.55□□□□□ -0.88
PCNX3-202ENST00000439247 C11orf44Q8N8P7 122 aa9.54□□□□□ -0.88
PCNX3-202ENST00000439247 UBE2L6O14933 153 aa9.54□□□□□ -0.88
PCNX3-202ENST00000439247 FAM19A3Q7Z5A8 133 aa9.54□□□□□ -0.88
PCNX3-202ENST00000439247 LINC01561Q8N1V8 128 aa9.54□□□□□ -0.88
PCNX3-202ENST00000439247 FN1P02751 2386 aaKnown RBP9.54□□□□□ -0.88
PCNX3-202ENST00000439247 CRYGAP11844 174 aa9.53□□□□□ -0.88
PCNX3-202ENST00000439247 NOP10Q9NPE3 64 aaKnown RBP9.53□□□□□ -0.88
PCNX3-202ENST00000439247 IGLV4-60A0A075B6I1 120 aa9.53□□□□□ -0.88
PCNX3-202ENST00000439247 RPL18AQ02543 176 aaKnown RBP9.53□□□□□ -0.88
PCNX3-202ENST00000439247 F8P00451 2351 aa9.53□□□□□ -0.88
PCNX3-202ENST00000439247 ATOX1O00244 68 aa9.53□□□□□ -0.88
PCNX3-202ENST00000439247 ODF3L2Q3SX64 289 aa9.53□□□□□ -0.88
PCNX3-202ENST00000439247 J3KT08 172 aa9.52□□□□□ -0.89
PCNX3-202ENST00000439247 HILS1P60008 231 aa9.52□□□□□ -0.89
PCNX3-202ENST00000439247 TEP1Q99973 2627 aaKnown RBP9.52□□□□□ -0.89
PCNX3-202ENST00000439247 PAX4O43316 350 aa9.52□□□□□ -0.89
PCNX3-202ENST00000439247 DEFB114Q30KQ6 69 aa9.52□□□□□ -0.89
PCNX3-202ENST00000439247 DSCR8Q96T75 97 aa9.52□□□□□ -0.89
PCNX3-202ENST00000439247 DNAJC9-AS1A6NH13 148 aa9.51□□□□□ -0.89
PCNX3-202ENST00000439247 PRR3P79522 188 aaKnown RBP9.51□□□□□ -0.89
PCNX3-202ENST00000439247 TMEM243Q9BU79 118 aa9.51□□□□□ -0.89
PCNX3-202ENST00000439247 OXTP01178 125 aa9.51□□□□□ -0.89
PCNX3-202ENST00000439247 STHQ8IWL8 128 aa9.5□□□□□ -0.89
PCNX3-202ENST00000439247 NBEAL2Q6ZNJ1 2754 aa9.5□□□□□ -0.89
PCNX3-202ENST00000439247 INAFM1C9JVW0 142 aa9.49□□□□□ -0.89
PCNX3-202ENST00000439247 SS18Q15532 418 aa9.49□□□□□ -0.89
PCNX3-202ENST00000439247 A0A1W2PRX2 142 aa9.49□□□□□ -0.89
PCNX3-202ENST00000439247 WFDC10AQ9H1F0 79 aa9.49□□□□□ -0.89
PCNX3-202ENST00000439247 SMIM9A6NGZ8 99 aa9.49□□□□□ -0.89
PCNX3-202ENST00000439247 USP17L23D6RBM5 183 aa9.49□□□□□ -0.89
PCNX3-202ENST00000439247 IL17DQ8TAD2 202 aa9.49□□□□□ -0.89
PCNX3-202ENST00000439247 OBSCN-AS1Q96MR7 158 aa9.48□□□□□ -0.89
PCNX3-202ENST00000439247 UPK3BQ9BT76 320 aa9.48□□□□□ -0.89
PCNX3-202ENST00000439247 Q6JHZ5 121 aa9.47□□□□□ -0.89
PCNX3-202ENST00000439247 TRBV10-1A0A0K0K1A3 114 aa9.47□□□□□ -0.89
PCNX3-202ENST00000439247 TRGV2A0A075B6R0 118 aa9.47□□□□□ -0.89
PCNX3-202ENST00000439247 SERP2Q8N6R1 65 aa9.47□□□□□ -0.89
PCNX3-202ENST00000439247 DPH3Q96FX2 82 aa9.46□□□□□ -0.89
PCNX3-202ENST00000439247 IGHV3OR16-9A0A0B4J2B5 98 aa9.46□□□□□ -0.9
PCNX3-202ENST00000439247 F8WDY8 70 aa9.46□□□□□ -0.9
PCNX3-202ENST00000439247 RNASE1P07998 156 aaKnown RBP9.46□□□□□ -0.9
PCNX3-202ENST00000439247 CLPSL2Q6UWE3 100 aa9.46□□□□□ -0.9
PCNX3-202ENST00000439247 C1orf43Q9BWL3 253 aa9.46□□□□□ -0.9
PCNX3-202ENST00000439247 H0YGX0 51 aa9.45□□□□□ -0.9
PCNX3-202ENST00000439247 FAM19A1Q7Z5A9 133 aa9.45□□□□□ -0.9
PCNX3-202ENST00000439247 TRAV23DV6A0A075B6W5 121 aa9.45□□□□□ -0.9
PCNX3-202ENST00000439247 MAST4O15021 2626 aa9.44□□□□□ -0.9
PCNX3-202ENST00000439247 RPL35AP18077 110 aaKnown RBP9.43□□□□□ -0.9
PCNX3-202ENST00000439247 FHL2Q14192 279 aa9.43□□□□□ -0.9
PCNX3-202ENST00000439247 XCL1P47992 114 aa9.43□□□□□ -0.9
PCNX3-202ENST00000439247 OVOL2Q9BRP0 275 aa9.43□□□□□ -0.9
PCNX3-202ENST00000439247 PLAC8L1A1L4L8 177 aa9.42□□□□□ -0.9
PCNX3-202ENST00000439247 C5orf47Q569G3 176 aa9.42□□□□□ -0.9
PCNX3-202ENST00000439247 ORMDL1Q9P0S3 153 aa9.42□□□□□ -0.9
PCNX3-202ENST00000439247 TRGV4A0A0C4DH28 118 aa9.42□□□□□ -0.9
PCNX3-202ENST00000439247 TRBV6-4A0A1B0GX49 114 aa9.42□□□□□ -0.9
PCNX3-202ENST00000439247 GIG44P09565 113 aaPredicted RBP9.42□□□□□ -0.9
PCNX3-202ENST00000439247 C4orf26Q17RF5 130 aa9.42□□□□□ -0.9
PCNX3-202ENST00000439247 C6orf226Q5I0X4 101 aa9.42□□□□□ -0.9
PCNX3-202ENST00000439247 TMEM86BQ8N661 226 aa9.42□□□□□ -0.9
PCNX3-202ENST00000439247 C4orf3Q8WVX3 66 aa9.42□□□□□ -0.9
PCNX3-202ENST00000439247 IBA57-AS1B1ANH7 110 aa9.42□□□□□ -0.9
PCNX3-202ENST00000439247 ENHOQ6UWT2 76 aa9.41□□□□□ -0.9
PCNX3-202ENST00000439247 TENM1Q9UKZ4 2725 aa9.41□□□□□ -0.9
PCNX3-202ENST00000439247 CCKP06307 115 aa9.41□□□□□ -0.9
PCNX3-202ENST00000439247 NANOS2P60321 138 aaKnown RBP9.4□□□□□ -0.9
PCNX3-202ENST00000439247 A0A087WZ39 114 aa9.4□□□□□ -0.9
PCNX3-202ENST00000439247 TRBV6-8A0A0A6YYG3 113 aa9.4□□□□□ -0.91
PCNX3-202ENST00000439247 GHRHP01286 108 aa9.4□□□□□ -0.91
PCNX3-202ENST00000439247 A0A096LPF7 62 aa9.39□□□□□ -0.91
PCNX3-202ENST00000439247 TMEM258P61165 79 aa9.39□□□□□ -0.91
PCNX3-202ENST00000439247 RPS28P62857 69 aaKnown RBP9.39□□□□□ -0.91
PCNX3-202ENST00000439247 LINC00959A0A1B0GUT2 108 aa9.38□□□□□ -0.91
PCNX3-202ENST00000439247 C9orf116Q5BN46 136 aaPredicted RBP9.38□□□□□ -0.91
PCNX3-202ENST00000439247 LINC01006Q8NI28 216 aa9.38□□□□□ -0.91
PCNX3-202ENST00000439247 HRCT1Q6UXD1 115 aa9.37□□□□□ -0.91
PCNX3-202ENST00000439247 Q8N814 137 aa9.37□□□□□ -0.91
PCNX3-202ENST00000439247 M0R2N4 97 aa9.36□□□□□ -0.91
PCNX3-202ENST00000439247 Q8NDZ9 215 aa9.36□□□□□ -0.91
PCNX3-202ENST00000439247 C20orf197Q8N268 126 aa9.36□□□□□ -0.91
PCNX3-202ENST00000439247 ATRQ13535 2644 aa9.36□□□□□ -0.91
PCNX3-202ENST00000439247 DEFB130BP0DP73 79 aa9.36□□□□□ -0.91
PCNX3-202ENST00000439247 DEFB130AP0DP74 79 aa9.36□□□□□ -0.91
PCNX3-202ENST00000439247 SPATA3Q8NHX4 192 aa9.36□□□□□ -0.91
PCNX3-202ENST00000439247 Q8N3U1 123 aa9.35□□□□□ -0.91
PCNX3-202ENST00000439247 VWFP04275 2813 aa9.34□□□□□ -0.91
PCNX3-202ENST00000439247 SEC61GP60059 68 aa9.34□□□□□ -0.91
PCNX3-202ENST00000439247 Q5XG85 94 aa9.34□□□□□ -0.91
PCNX3-202ENST00000439247 IGLV10-54A0A075B6I4 117 aa9.34□□□□□ -0.92
PCNX3-202ENST00000439247 FBN1P35555 2871 aaKnown RBP9.33□□□□□ -0.92
PCNX3-202ENST00000439247 CCL24O00175 119 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms