RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 Q8IZM0 81 aa10.19□□□□□ -0.78
LINC00163-202ENST00000439088 C15orf53Q8NAA6 179 aa10.19□□□□□ -0.78
LINC00163-202ENST00000439088 COPS9Q8WXC6 57 aa10.19□□□□□ -0.78
LINC00163-202ENST00000439088 EIF4EBP3O60516 100 aaPredicted RBP10.18□□□□□ -0.78
LINC00163-202ENST00000439088 LINC00308Q8TCZ7 52 aa10.18□□□□□ -0.78
LINC00163-202ENST00000439088 TSPAN13O95857 204 aa10.18□□□□□ -0.78
LINC00163-202ENST00000439088 NPC2P61916 151 aa10.18□□□□□ -0.78
LINC00163-202ENST00000439088 TRAV8-4A0A0B4J246 113 aa10.17□□□□□ -0.78
LINC00163-202ENST00000439088 A0A0U1RRA0 63 aa10.17□□□□□ -0.78
LINC00163-202ENST00000439088 MALP21145 153 aa10.17□□□□□ -0.78
LINC00163-202ENST00000439088 VPS25Q9BRG1 176 aa10.17□□□□□ -0.78
LINC00163-202ENST00000439088 PPDPFQ9H3Y8 114 aa10.16□□□□□ -0.78
LINC00163-202ENST00000439088 GAGE12HA6NDE8 117 aa10.16□□□□□ -0.78
LINC00163-202ENST00000439088 IBA57-AS1B1ANH7 110 aa10.16□□□□□ -0.78
LINC00163-202ENST00000439088 CRPP02741 224 aa10.16□□□□□ -0.78
LINC00163-202ENST00000439088 B9D2Q9BPU9 175 aa10.16□□□□□ -0.78
LINC00163-202ENST00000439088 K7ERU9 68 aa10.15□□□□□ -0.78
LINC00163-202ENST00000439088 KIAA0087Q14695 138 aa10.15□□□□□ -0.78
LINC00163-202ENST00000439088 UBE2WQ96B02 151 aa10.15□□□□□ -0.78
LINC00163-202ENST00000439088 ERG28Q9UKR5 140 aa10.15□□□□□ -0.79
LINC00163-202ENST00000439088 DNHD1Q96M86 4753 aa10.14□□□□□ -0.79
LINC00163-202ENST00000439088 LINC01556Q5JQF7 62 aa10.14□□□□□ -0.79
LINC00163-202ENST00000439088 KLK5Q9Y337 293 aaPredicted RBP10.14□□□□□ -0.79
LINC00163-202ENST00000439088 SOSTDC1Q6X4U4 206 aa10.13□□□□□ -0.79
LINC00163-202ENST00000439088 CXCL5P42830 114 aa10.13□□□□□ -0.79
LINC00163-202ENST00000439088 LINC00158P58513 81 aa10.13□□□□□ -0.79
LINC00163-202ENST00000439088 CKS1BP61024 79 aa10.13□□□□□ -0.79
LINC00163-202ENST00000439088 CFAP161Q6P656 301 aa10.13□□□□□ -0.79
LINC00163-202ENST00000439088 MIR7-3HGQ8N6C7 128 aa10.12□□□□□ -0.79
LINC00163-202ENST00000439088 HUWE1Q7Z6Z7 4374 aaKnown RBP10.12□□□□□ -0.79
LINC00163-202ENST00000439088 LOC107984156A0A0G2JMH3 177 aa10.11□□□□□ -0.79
LINC00163-202ENST00000439088 LYRM7Q5U5X0 104 aa10.11□□□□□ -0.79
LINC00163-202ENST00000439088 C2orf82Q6UX34 121 aa10.11□□□□□ -0.79
LINC00163-202ENST00000439088 ARL17AQ8IVW1 177 aa10.11□□□□□ -0.79
LINC00163-202ENST00000439088 DNAH10OSP0CZ25 163 aa10.1□□□□□ -0.79
LINC00163-202ENST00000439088 LINC00588Q9Y4M8 146 aa10.1□□□□□ -0.79
LINC00163-202ENST00000439088 H7C2G1 150 aa10.09□□□□□ -0.79
LINC00163-202ENST00000439088 PFN2P35080 140 aa10.09□□□□□ -0.79
LINC00163-202ENST00000439088 CCL18P55774 89 aa10.09□□□□□ -0.79
LINC00163-202ENST00000439088 KRTAP26-1Q6PEX3 210 aa10.09□□□□□ -0.79
LINC00163-202ENST00000439088 PSMB2P49721 201 aa10.08□□□□□ -0.8
LINC00163-202ENST00000439088 Q1RN00 199 aa10.08□□□□□ -0.8
LINC00163-202ENST00000439088 SCGB1C2P0DMR2 95 aa10.07□□□□□ -0.8
LINC00163-202ENST00000439088 SPAG11BQ08648 103 aa10.07□□□□□ -0.8
LINC00163-202ENST00000439088 COX17Q14061 63 aa10.07□□□□□ -0.8
LINC00163-202ENST00000439088 TRBV30A0A0K0K1B3 111 aa10.07□□□□□ -0.8
LINC00163-202ENST00000439088 H3BMG7 143 aa10.07□□□□□ -0.8
LINC00163-202ENST00000439088 NHLRC4P0CG21 123 aaPredicted RBP10.07□□□□□ -0.8
LINC00163-202ENST00000439088 TRBV20-1A0A075B6N2 111 aa10.06□□□□□ -0.8
LINC00163-202ENST00000439088 RPL13AP40429 203 aaKnown RBP10.05□□□□□ -0.8
LINC00163-202ENST00000439088 C1orf43Q9BWL3 253 aa10.05□□□□□ -0.8
LINC00163-202ENST00000439088 SND1-IT1Q9HBX3 110 aa10.05□□□□□ -0.8
LINC00163-202ENST00000439088 F8W1H4 67 aa10.04□□□□□ -0.8
LINC00163-202ENST00000439088 C6orf223Q8N319 242 aa10.04□□□□□ -0.8
LINC00163-202ENST00000439088 UPK3BQ9BT76 320 aa10.04□□□□□ -0.8
LINC00163-202ENST00000439088 TCL1BO95988 128 aa10.03□□□□□ -0.8
LINC00163-202ENST00000439088 UNQ6190/PRO20217Q6UXQ8 127 aa10.03□□□□□ -0.8
LINC00163-202ENST00000439088 NTN5Q8WTR8 489 aaPredicted RBP10.03□□□□□ -0.8
LINC00163-202ENST00000439088 TRIAP1O43715 76 aa10.03□□□□□ -0.8
LINC00163-202ENST00000439088 TRAV13-2A0A0B4J235 113 aa10.02□□□□□ -0.81
LINC00163-202ENST00000439088 C10orf25Q5T742 122 aa10.02□□□□□ -0.81
LINC00163-202ENST00000439088 LINC00526Q96FQ7 95 aa10.02□□□□□ -0.81
LINC00163-202ENST00000439088 IGKV2D-24A0A075B6R9 120 aa10.01□□□□□ -0.81
LINC00163-202ENST00000439088 COX6CP09669 75 aa10.01□□□□□ -0.81
LINC00163-202ENST00000439088 IGKV2-28A0A075B6P5 120 aa10.01□□□□□ -0.81
LINC00163-202ENST00000439088 GVQW2A0A096LPI5 108 aaPredicted RBP10.01□□□□□ -0.81
LINC00163-202ENST00000439088 IGKV2D-28P01615 120 aa10.01□□□□□ -0.81
LINC00163-202ENST00000439088 C9orf116Q5BN46 136 aaPredicted RBP10.01□□□□□ -0.81
LINC00163-202ENST00000439088 MUC7Q8TAX7 377 aa10.01□□□□□ -0.81
LINC00163-202ENST00000439088 ZNF561-AS1K7EIQ3 104 aa10□□□□□ -0.81
LINC00163-202ENST00000439088 PRO0461Q9UI25 63 aa10□□□□□ -0.81
LINC00163-202ENST00000439088 DNAH9Q9NYC9 4486 aa10□□□□□ -0.81
LINC00163-202ENST00000439088 LINC00337Q8N6G1 96 aa9.98□□□□□ -0.81
LINC00163-202ENST00000439088 C15orf56Q8N910 161 aa9.98□□□□□ -0.81
LINC00163-202ENST00000439088 Q9HAA7 133 aa9.98□□□□□ -0.81
LINC00163-202ENST00000439088 APLNQ9ULZ1 77 aa9.98□□□□□ -0.81
LINC00163-202ENST00000439088 WFDC2Q14508 124 aa9.98□□□□□ -0.81
LINC00163-202ENST00000439088 ATXN8Q156A1 80 aa9.98□□□□□ -0.81
LINC00163-202ENST00000439088 HIGD2BQ4VC39 106 aa9.97□□□□□ -0.81
LINC00163-202ENST00000439088 C2orf48Q96LS8 159 aa9.97□□□□□ -0.81
LINC00163-202ENST00000439088 F8WDY8 70 aa9.97□□□□□ -0.81
LINC00163-202ENST00000439088 C6orf48Q9UBA6 75 aa9.97□□□□□ -0.81
LINC00163-202ENST00000439088 COL7A1Q02388 2944 aa9.96□□□□□ -0.81
LINC00163-202ENST00000439088 NDUFC2O95298 119 aa9.96□□□□□ -0.82
LINC00163-202ENST00000439088 KRTAP21-3Q3LHN1 58 aa9.96□□□□□ -0.82
LINC00163-202ENST00000439088 CAMK2N2Q96S95 79 aa9.96□□□□□ -0.82
LINC00163-202ENST00000439088 RMI2Q96E14 147 aa9.95□□□□□ -0.82
LINC00163-202ENST00000439088 MTURNQ8N3F0 131 aa9.95□□□□□ -0.82
LINC00163-202ENST00000439088 RPL28P46779 137 aaKnown RBP9.94□□□□□ -0.82
LINC00163-202ENST00000439088 SMCPP49901 116 aaPredicted RBP9.94□□□□□ -0.82
LINC00163-202ENST00000439088 NUPR2A6NF83 97 aa9.93□□□□□ -0.82
LINC00163-202ENST00000439088 STAB2Q8WWQ8 2551 aa9.93□□□□□ -0.82
LINC00163-202ENST00000439088 LST1O00453 97 aa9.92□□□□□ -0.82
LINC00163-202ENST00000439088 LINC01620Q4KN68 170 aa9.92□□□□□ -0.82
LINC00163-202ENST00000439088 Q6ZRU5 148 aa9.92□□□□□ -0.82
LINC00163-202ENST00000439088 CLEC2BQ92478 149 aa9.92□□□□□ -0.82
LINC00163-202ENST00000439088 MEGF8Q7Z7M0 2845 aa9.92□□□□□ -0.82
LINC00163-202ENST00000439088 PRKDCP78527 4128 aaKnown RBP9.91□□□□□ -0.82
LINC00163-202ENST00000439088 UBE2DNLQ8IWF7 75 aa9.91□□□□□ -0.82
LINC00163-202ENST00000439088 OR13C6PQ8NH95 151 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms