RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 FAM19A3Q7Z5A8 133 aa9.71□□□□□ -0.86
PTCHD3-201ENST00000438700 FAM236AA0A1B0GUQ0 79 aa9.7□□□□□ -0.86
PTCHD3-201ENST00000438700 FAM236BA0A1B0GV22 79 aa9.7□□□□□ -0.86
PTCHD3-201ENST00000438700 CIRBPQ14011 172 aaKnown RBP9.7□□□□□ -0.86
PTCHD3-201ENST00000438700 DEFB121Q5J5C9 76 aa9.7□□□□□ -0.86
PTCHD3-201ENST00000438700 TRBV6-8A0A0A6YYG3 113 aa9.7□□□□□ -0.86
PTCHD3-201ENST00000438700 TIMM17BO60830 172 aa9.7□□□□□ -0.86
PTCHD3-201ENST00000438700 LINC00308Q8TCZ7 52 aa9.7□□□□□ -0.86
PTCHD3-201ENST00000438700 DEFB4AO15263 64 aa9.69□□□□□ -0.86
PTCHD3-201ENST00000438700 CMYA5Q8N3K9 4069 aa9.69□□□□□ -0.86
PTCHD3-201ENST00000438700 FAM240AA0A1B0GVK7 77 aa9.68□□□□□ -0.86
PTCHD3-201ENST00000438700 LINC00612Q8N6U2 182 aa9.68□□□□□ -0.86
PTCHD3-201ENST00000438700 EGFEM1PQ0D2K5 195 aa9.67□□□□□ -0.86
PTCHD3-201ENST00000438700 FAM222AQ5U5X8 452 aa9.67□□□□□ -0.86
PTCHD3-201ENST00000438700 IGHV4-28A0A0C4DH34 117 aa9.67□□□□□ -0.86
PTCHD3-201ENST00000438700 TRBV7-7A0A0K0K1E9 115 aa9.67□□□□□ -0.86
PTCHD3-201ENST00000438700 A0A096LPF7 62 aa9.66□□□□□ -0.86
PTCHD3-201ENST00000438700 GYPEP15421 78 aa9.66□□□□□ -0.86
PTCHD3-201ENST00000438700 FAM218AQ96MZ4 157 aa9.66□□□□□ -0.86
PTCHD3-201ENST00000438700 TOMM7Q9P0U1 55 aa9.66□□□□□ -0.86
PTCHD3-201ENST00000438700 MRPL23Q16540 153 aaKnown RBP9.66□□□□□ -0.86
PTCHD3-201ENST00000438700 C22orf24Q9Y442 160 aa9.65□□□□□ -0.86
PTCHD3-201ENST00000438700 Q8NAQ8 132 aa9.65□□□□□ -0.86
PTCHD3-201ENST00000438700 LYRM9A8MSI8 78 aa9.64□□□□□ -0.87
PTCHD3-201ENST00000438700 COX7A2LO14548 114 aa9.64□□□□□ -0.87
PTCHD3-201ENST00000438700 MIFP14174 115 aa9.64□□□□□ -0.87
PTCHD3-201ENST00000438700 Q9HAA7 133 aa9.64□□□□□ -0.87
PTCHD3-201ENST00000438700 BAALC-AS2P0C853 105 aa9.62□□□□□ -0.87
PTCHD3-201ENST00000438700 CLPSL2Q6UWE3 100 aa9.62□□□□□ -0.87
PTCHD3-201ENST00000438700 C5orf38Q86SI9 138 aa9.62□□□□□ -0.87
PTCHD3-201ENST00000438700 COX7B2Q8TF08 81 aa9.62□□□□□ -0.87
PTCHD3-201ENST00000438700 CELA1Q9UNI1 258 aa9.62□□□□□ -0.87
PTCHD3-201ENST00000438700 PPDPFQ9H3Y8 114 aa9.61□□□□□ -0.87
PTCHD3-201ENST00000438700 KLK5Q9Y337 293 aaPredicted RBP9.61□□□□□ -0.87
PTCHD3-201ENST00000438700 NOTCH1P46531 2555 aa9.61□□□□□ -0.87
PTCHD3-201ENST00000438700 IGHV3OR16-9A0A0B4J2B5 98 aa9.61□□□□□ -0.87
PTCHD3-201ENST00000438700 PRO0255Q9UI72 69 aa9.61□□□□□ -0.87
PTCHD3-201ENST00000438700 DAD1P61803 113 aa9.6□□□□□ -0.87
PTCHD3-201ENST00000438700 C9orf129Q5T035 196 aaKnown RBP9.6□□□□□ -0.87
PTCHD3-201ENST00000438700 RETNQ9HD89 108 aa9.6□□□□□ -0.87
PTCHD3-201ENST00000438700 C11orf68Q9H3H3 251 aaKnown RBP9.59□□□□□ -0.87
PTCHD3-201ENST00000438700 LINC00959A0A1B0GUT2 108 aa9.59□□□□□ -0.87
PTCHD3-201ENST00000438700 PAX4O43316 350 aa9.59□□□□□ -0.87
PTCHD3-201ENST00000438700 XCL1P47992 114 aa9.59□□□□□ -0.87
PTCHD3-201ENST00000438700 ANK2Q01484 3957 aa9.59□□□□□ -0.87
PTCHD3-201ENST00000438700 GAGE2AQ6NT46 116 aa9.58□□□□□ -0.88
PTCHD3-201ENST00000438700 MIR7-3HGQ8N6C7 128 aa9.58□□□□□ -0.88
PTCHD3-201ENST00000438700 SPART-AS1P0CW21 52 aa9.58□□□□□ -0.88
PTCHD3-201ENST00000438700 COPS9Q8WXC6 57 aa9.58□□□□□ -0.88
PTCHD3-201ENST00000438700 DNAH3Q8TD57 4116 aa9.58□□□□□ -0.88
PTCHD3-201ENST00000438700 C9orf153Q5TBE3 101 aa9.57□□□□□ -0.88
PTCHD3-201ENST00000438700 LINC00643Q86TS7 51 aa9.57□□□□□ -0.88
PTCHD3-201ENST00000438700 A0A087WZ39 114 aa9.57□□□□□ -0.88
PTCHD3-201ENST00000438700 ACYP1P07311 99 aa9.57□□□□□ -0.88
PTCHD3-201ENST00000438700 LOC107984640A0A0U1RRK4 108 aa9.56□□□□□ -0.88
PTCHD3-201ENST00000438700 LINC00158P58513 81 aa9.56□□□□□ -0.88
PTCHD3-201ENST00000438700 Q8N3U1 123 aa9.56□□□□□ -0.88
PTCHD3-201ENST00000438700 ATP5G1P05496 136 aa9.55□□□□□ -0.88
PTCHD3-201ENST00000438700 PFN2P35080 140 aa9.55□□□□□ -0.88
PTCHD3-201ENST00000438700 C3orf22Q8N5N4 141 aa9.55□□□□□ -0.88
PTCHD3-201ENST00000438700 LINC00337Q8N6G1 96 aa9.55□□□□□ -0.88
PTCHD3-201ENST00000438700 IMUPQ9GZP8 106 aa9.55□□□□□ -0.88
PTCHD3-201ENST00000438700 NBEAL1Q6ZS30 2694 aa9.55□□□□□ -0.88
PTCHD3-201ENST00000438700 TRACP01848 142 aa9.55□□□□□ -0.88
PTCHD3-201ENST00000438700 PRB2P02812 416 aaPredicted RBP9.55□□□□□ -0.88
PTCHD3-201ENST00000438700 HTN3P15516 51 aa9.54□□□□□ -0.88
PTCHD3-201ENST00000438700 SDIM1Q6ZPB5 146 aa9.54□□□□□ -0.88
PTCHD3-201ENST00000438700 A0A087WYN8 130 aa9.54□□□□□ -0.88
PTCHD3-201ENST00000438700 TMEM126AQ9H061 195 aa9.54□□□□□ -0.88
PTCHD3-201ENST00000438700 A0A1B0GUV1 79 aa9.53□□□□□ -0.88
PTCHD3-201ENST00000438700 SS18Q15532 418 aa9.53□□□□□ -0.88
PTCHD3-201ENST00000438700 MDFIQ99750 246 aa9.53□□□□□ -0.88
PTCHD3-201ENST00000438700 IGKV2-28A0A075B6P5 120 aa9.53□□□□□ -0.88
PTCHD3-201ENST00000438700 IGKV2D-28P01615 120 aa9.53□□□□□ -0.88
PTCHD3-201ENST00000438700 C6orf226Q5I0X4 101 aa9.53□□□□□ -0.88
PTCHD3-201ENST00000438700 LINC00269Q8N2A0 174 aa9.53□□□□□ -0.88
PTCHD3-201ENST00000438700 CYSTM1Q9H1C7 97 aa9.53□□□□□ -0.88
PTCHD3-201ENST00000438700 SND1-IT1Q9HBX3 110 aa9.53□□□□□ -0.88
PTCHD3-201ENST00000438700 TENM3Q9P273 2699 aa9.52□□□□□ -0.88
PTCHD3-201ENST00000438700 MALP21145 153 aa9.52□□□□□ -0.88
PTCHD3-201ENST00000438700 IGLV10-54A0A075B6I4 117 aa9.52□□□□□ -0.89
PTCHD3-201ENST00000438700 C14orf132Q9NPU4 83 aa9.52□□□□□ -0.89
PTCHD3-201ENST00000438700 MGAM2Q2M2H8 2515 aa9.52□□□□□ -0.89
PTCHD3-201ENST00000438700 IGKV3D-7A0A0C4DH55 119 aa9.51□□□□□ -0.89
PTCHD3-201ENST00000438700 CRPP02741 224 aa9.51□□□□□ -0.89
PTCHD3-201ENST00000438700 UQCRQO14949 82 aa9.5□□□□□ -0.89
PTCHD3-201ENST00000438700 ANGP03950 147 aaKnown RBP9.5□□□□□ -0.89
PTCHD3-201ENST00000438700 CCL18P55774 89 aa9.5□□□□□ -0.89
PTCHD3-201ENST00000438700 IBA57-AS1B1ANH7 110 aa9.5□□□□□ -0.89
PTCHD3-201ENST00000438700 SMIM11BQ8TCY0 68 aa9.5□□□□□ -0.89
PTCHD3-201ENST00000438700 C2orf48Q96LS8 159 aa9.5□□□□□ -0.89
PTCHD3-201ENST00000438700 A0A087WVE0 104 aa9.49□□□□□ -0.89
PTCHD3-201ENST00000438700 SLPIP03973 132 aa9.49□□□□□ -0.89
PTCHD3-201ENST00000438700 LINC00526Q96FQ7 95 aa9.49□□□□□ -0.89
PTCHD3-201ENST00000438700 RPL28P46779 137 aaKnown RBP9.49□□□□□ -0.89
PTCHD3-201ENST00000438700 TRAV13-2A0A0B4J235 113 aa9.48□□□□□ -0.89
PTCHD3-201ENST00000438700 hADV29S1A0JD25 119 aa9.48□□□□□ -0.89
PTCHD3-201ENST00000438700 K7EIL1 84 aa9.47□□□□□ -0.89
PTCHD3-201ENST00000438700 COX7CP15954 63 aa9.47□□□□□ -0.89
PTCHD3-201ENST00000438700 LINC00846Q9NV44 126 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms