RNA–Protein interactions for RNA: ENST00000437966.3

CHRNA7-202, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 1,788 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-202ENST00000437966 HERV-K104P63124 156 aa13.07□□□□□ -0.32
CHRNA7-202ENST00000437966 Q8IZM0 81 aa13.07□□□□□ -0.32
CHRNA7-202ENST00000437966 C6orf223Q8N319 242 aa13.07□□□□□ -0.32
CHRNA7-202ENST00000437966 UPK3BQ9BT76 320 aa13.07□□□□□ -0.32
CHRNA7-202ENST00000437966 STARD9Q9P2P6 4700 aa13.06□□□□□ -0.32
CHRNA7-202ENST00000437966 NUPR2A6NF83 97 aa13.06□□□□□ -0.32
CHRNA7-202ENST00000437966 TIMM17BO60830 172 aa13.06□□□□□ -0.32
CHRNA7-202ENST00000437966 UBE2DNLQ8IWF7 75 aa13.06□□□□□ -0.32
CHRNA7-202ENST00000437966 NAA38Q9BRA0 125 aaKnown RBP13.06□□□□□ -0.32
CHRNA7-202ENST00000437966 SPANXDQ9BXN6 97 aa13.06□□□□□ -0.32
CHRNA7-202ENST00000437966 SPANXCQ9NY87 97 aa13.06□□□□□ -0.32
CHRNA7-202ENST00000437966 CIRBPQ14011 172 aaKnown RBP13.05□□□□□ -0.32
CHRNA7-202ENST00000437966 C1orf43Q9BWL3 253 aa13.05□□□□□ -0.32
CHRNA7-202ENST00000437966 KLK5Q9Y337 293 aaPredicted RBP13.05□□□□□ -0.32
CHRNA7-202ENST00000437966 FBN3Q75N90 2809 aa13.05□□□□□ -0.32
CHRNA7-202ENST00000437966 CFAP161Q6P656 301 aa13.04□□□□□ -0.32
CHRNA7-202ENST00000437966 IBA57-AS1B1ANH7 110 aa13.04□□□□□ -0.32
CHRNA7-202ENST00000437966 CKS1BP61024 79 aa13.04□□□□□ -0.32
CHRNA7-202ENST00000437966 A4D1N5 150 aa13.03□□□□□ -0.32
CHRNA7-202ENST00000437966 APOMO95445 188 aa13.03□□□□□ -0.32
CHRNA7-202ENST00000437966 SPAG11BQ08648 103 aa13.03□□□□□ -0.32
CHRNA7-202ENST00000437966 PFN2P35080 140 aa13.02□□□□□ -0.32
CHRNA7-202ENST00000437966 COX11Q9Y6N1 276 aa13.02□□□□□ -0.32
CHRNA7-202ENST00000437966 LINC00158P58513 81 aa13.02□□□□□ -0.33
CHRNA7-202ENST00000437966 HIGD2BQ4VC39 106 aa13.02□□□□□ -0.33
CHRNA7-202ENST00000437966 CFC1BP0CG36 223 aa13□□□□□ -0.33
CHRNA7-202ENST00000437966 CFC1P0CG37 223 aa13□□□□□ -0.33
CHRNA7-202ENST00000437966 C10orf25Q5T742 122 aa13□□□□□ -0.33
CHRNA7-202ENST00000437966 SOSTDC1Q6X4U4 206 aa13□□□□□ -0.33
CHRNA7-202ENST00000437966 TENM2Q9NT68 2774 aa13□□□□□ -0.33
CHRNA7-202ENST00000437966 TMEM238LA0A1B0GVL6 79 aa12.99□□□□□ -0.33
CHRNA7-202ENST00000437966 A6NJY4 79 aa12.99□□□□□ -0.33
CHRNA7-202ENST00000437966 RPL24P83731 157 aaKnown RBP12.99□□□□□ -0.33
CHRNA7-202ENST00000437966 C9orf116Q5BN46 136 aaPredicted RBP12.99□□□□□ -0.33
CHRNA7-202ENST00000437966 CASC10Q5T4H9 136 aa12.99□□□□□ -0.33
CHRNA7-202ENST00000437966 UNQ6190/PRO20217Q6UXQ8 127 aa12.99□□□□□ -0.33
CHRNA7-202ENST00000437966 LINC00308Q8TCZ7 52 aa12.99□□□□□ -0.33
CHRNA7-202ENST00000437966 KRTAP1-5Q9BYS1 174 aa12.99□□□□□ -0.33
CHRNA7-202ENST00000437966 A0A1B0GWB2 263 aa12.99□□□□□ -0.33
CHRNA7-202ENST00000437966 MIR7-3HGQ8N6C7 128 aa12.99□□□□□ -0.33
CHRNA7-202ENST00000437966 ERG28Q9UKR5 140 aa12.99□□□□□ -0.33
CHRNA7-202ENST00000437966 H3BUT2 72 aa12.98□□□□□ -0.33
CHRNA7-202ENST00000437966 C9orf118A6NHY6 69 aa12.97□□□□□ -0.33
CHRNA7-202ENST00000437966 C15orf56Q8N910 161 aa12.97□□□□□ -0.33
CHRNA7-202ENST00000437966 IFITM1P13164 125 aa12.96□□□□□ -0.34
CHRNA7-202ENST00000437966 CXCL5P42830 114 aa12.94□□□□□ -0.34
CHRNA7-202ENST00000437966 SFTA2Q6UW10 78 aa12.94□□□□□ -0.34
CHRNA7-202ENST00000437966 NTN5Q8WTR8 489 aaPredicted RBP12.94□□□□□ -0.34
CHRNA7-202ENST00000437966 ZNF561-AS1K7EIQ3 104 aa12.94□□□□□ -0.34
CHRNA7-202ENST00000437966 VPS13DQ5THJ4 4388 aa12.93□□□□□ -0.34
CHRNA7-202ENST00000437966 PGPEP1Q9NXJ5 209 aa12.92□□□□□ -0.34
CHRNA7-202ENST00000437966 DNAH10Q8IVF4 4471 aa12.92□□□□□ -0.34
CHRNA7-202ENST00000437966 VAMP3Q15836 100 aa12.92□□□□□ -0.34
CHRNA7-202ENST00000437966 TGP01266 2768 aa12.91□□□□□ -0.34
CHRNA7-202ENST00000437966 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.91□□□□□ -0.34
CHRNA7-202ENST00000437966 H7C2G1 150 aa12.91□□□□□ -0.34
CHRNA7-202ENST00000437966 LECT2O14960 151 aa12.9□□□□□ -0.34
CHRNA7-202ENST00000437966 CAMK2N2Q96S95 79 aa12.9□□□□□ -0.34
CHRNA7-202ENST00000437966 C6orf48Q9UBA6 75 aa12.9□□□□□ -0.34
CHRNA7-202ENST00000437966 PRO1854Q9UHT4 67 aa12.9□□□□□ -0.34
CHRNA7-202ENST00000437966 TSPAN13O95857 204 aa12.89□□□□□ -0.35
CHRNA7-202ENST00000437966 MUC7Q8TAX7 377 aa12.89□□□□□ -0.35
CHRNA7-202ENST00000437966 RMI2Q96E14 147 aa12.89□□□□□ -0.35
CHRNA7-202ENST00000437966 A0A0B4J2C4 111 aa12.89□□□□□ -0.35
CHRNA7-202ENST00000437966 A0A1W2PPM0 123 aa12.88□□□□□ -0.35
CHRNA7-202ENST00000437966 USP17L23D6RBM5 183 aa12.87□□□□□ -0.35
CHRNA7-202ENST00000437966 Q6ZRU5 148 aa12.87□□□□□ -0.35
CHRNA7-202ENST00000437966 GVQW2A0A096LPI5 108 aaPredicted RBP12.86□□□□□ -0.35
CHRNA7-202ENST00000437966 COPS9Q8WXC6 57 aa12.86□□□□□ -0.35
CHRNA7-202ENST00000437966 SND1-IT1Q9HBX3 110 aa12.86□□□□□ -0.35
CHRNA7-202ENST00000437966 NBDYA0A0U1RRE5 68 aa12.85□□□□□ -0.35
CHRNA7-202ENST00000437966 M0R2N4 97 aa12.85□□□□□ -0.35
CHRNA7-202ENST00000437966 COX17Q14061 63 aa12.85□□□□□ -0.35
CHRNA7-202ENST00000437966 C2orf48Q96LS8 159 aa12.84□□□□□ -0.35
CHRNA7-202ENST00000437966 FABP2P12104 132 aa12.83□□□□□ -0.36
CHRNA7-202ENST00000437966 WFDC2Q14508 124 aa12.83□□□□□ -0.36
CHRNA7-202ENST00000437966 SLPIP03973 132 aa12.82□□□□□ -0.36
CHRNA7-202ENST00000437966 RPL13AP40429 203 aaKnown RBP12.82□□□□□ -0.36
CHRNA7-202ENST00000437966 Q1RN00 199 aa12.82□□□□□ -0.36
CHRNA7-202ENST00000437966 PRR3P79522 188 aaKnown RBP12.81□□□□□ -0.36
CHRNA7-202ENST00000437966 WWC2-AS2Q96NR7 200 aa12.81□□□□□ -0.36
CHRNA7-202ENST00000437966 IGKV2-28A0A075B6P5 120 aa12.81□□□□□ -0.36
CHRNA7-202ENST00000437966 LOC107984156A0A0G2JMH3 177 aa12.81□□□□□ -0.36
CHRNA7-202ENST00000437966 IGKV2D-28P01615 120 aa12.81□□□□□ -0.36
CHRNA7-202ENST00000437966 SYCNQ0VAF6 134 aa12.81□□□□□ -0.36
CHRNA7-202ENST00000437966 ARL17AQ8IVW1 177 aa12.81□□□□□ -0.36
CHRNA7-202ENST00000437966 TRBV30A0A0K0K1B3 111 aa12.8□□□□□ -0.36
CHRNA7-202ENST00000437966 PSCAO43653 123 aa12.8□□□□□ -0.36
CHRNA7-202ENST00000437966 SPCS1Q9Y6A9 102 aa12.8□□□□□ -0.36
CHRNA7-202ENST00000437966 GAGE10A6NGK3 116 aa12.79□□□□□ -0.36
CHRNA7-202ENST00000437966 Q8NDZ9 215 aa12.79□□□□□ -0.36
CHRNA7-202ENST00000437966 PPDPFQ9H3Y8 114 aa12.79□□□□□ -0.36
CHRNA7-202ENST00000437966 UBE2V1Q13404 147 aa12.79□□□□□ -0.36
CHRNA7-202ENST00000437966 PSMB2P49721 201 aa12.78□□□□□ -0.36
CHRNA7-202ENST00000437966 TTC32Q5I0X7 151 aa12.78□□□□□ -0.36
CHRNA7-202ENST00000437966 LINC00337Q8N6G1 96 aa12.78□□□□□ -0.36
CHRNA7-202ENST00000437966 XAGE1AQ9HD64 81 aa12.78□□□□□ -0.36
CHRNA7-202ENST00000437966 K7EP34 96 aa12.77□□□□□ -0.36
CHRNA7-202ENST00000437966 CARD19Q96LW7 228 aa12.76□□□□□ -0.37
CHRNA7-202ENST00000437966 SCGB1C2P0DMR2 95 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms