RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 REG3AQ06141 175 aa14.41□□□□□ -0.1
PTPRF-207ENST00000436724 IGLV10-54A0A075B6I4 117 aa14.4□□□□□ -0.1
PTPRF-207ENST00000436724 SS18Q15532 418 aa14.4□□□□□ -0.1
PTPRF-207ENST00000436724 ESRGQ1W209 222 aa14.4□□□□□ -0.1
PTPRF-207ENST00000436724 WFDC10BQ8IUB3 73 aa14.4□□□□□ -0.1
PTPRF-207ENST00000436724 SIGMAR1Q99720 223 aa14.39□□□□□ -0.11
PTPRF-207ENST00000436724 CARD19Q96LW7 228 aa14.39□□□□□ -0.11
PTPRF-207ENST00000436724 Q9H8V8 135 aa14.39□□□□□ -0.11
PTPRF-207ENST00000436724 TRAV10A0A0B4J240 114 aa14.38□□□□□ -0.11
PTPRF-207ENST00000436724 MIAQ16674 131 aa14.38□□□□□ -0.11
PTPRF-207ENST00000436724 ZNF625Q96I27 306 aaPredicted RBP14.38□□□□□ -0.11
PTPRF-207ENST00000436724 KLK12Q9UKR0 248 aa14.38□□□□□ -0.11
PTPRF-207ENST00000436724 A0A087WZ39 114 aa14.37□□□□□ -0.11
PTPRF-207ENST00000436724 NDUFA1O15239 70 aa14.37□□□□□ -0.11
PTPRF-207ENST00000436724 TOMM7Q9P0U1 55 aa14.36□□□□□ -0.11
PTPRF-207ENST00000436724 TEN1Q86WV5 123 aa14.36□□□□□ -0.11
PTPRF-207ENST00000436724 CHCHD10Q8WYQ3 142 aaPredicted RBP14.35□□□□□ -0.11
PTPRF-207ENST00000436724 TIMM17BO60830 172 aa14.34□□□□□ -0.11
PTPRF-207ENST00000436724 NPC2P61916 151 aa14.34□□□□□ -0.11
PTPRF-207ENST00000436724 B9D2Q9BPU9 175 aa14.34□□□□□ -0.11
PTPRF-207ENST00000436724 Q1RN00 199 aa14.34□□□□□ -0.11
PTPRF-207ENST00000436724 TRBV30A0A0K0K1B3 111 aa14.33□□□□□ -0.11
PTPRF-207ENST00000436724 COX7B2Q8TF08 81 aa14.33□□□□□ -0.11
PTPRF-207ENST00000436724 PPDPFLQ8WWR9 84 aa14.33□□□□□ -0.11
PTPRF-207ENST00000436724 TRIAP1O43715 76 aa14.32□□□□□ -0.12
PTPRF-207ENST00000436724 ENHOQ6UWT2 76 aa14.32□□□□□ -0.12
PTPRF-207ENST00000436724 DAND5Q8N907 189 aa14.32□□□□□ -0.12
PTPRF-207ENST00000436724 PRR34Q9NV39 138 aa14.32□□□□□ -0.12
PTPRF-207ENST00000436724 A0A0U1RRA0 63 aa14.32□□□□□ -0.12
PTPRF-207ENST00000436724 C9JAW5 83 aa14.32□□□□□ -0.12
PTPRF-207ENST00000436724 CD164L2Q6UWJ8 174 aa14.32□□□□□ -0.12
PTPRF-207ENST00000436724 SLC25A20O43772 301 aa14.31□□□□□ -0.12
PTPRF-207ENST00000436724 ANKRD29Q8N6D5 301 aa14.31□□□□□ -0.12
PTPRF-207ENST00000436724 MEGF8Q7Z7M0 2845 aa14.31□□□□□ -0.12
PTPRF-207ENST00000436724 IFITM1P13164 125 aa14.3□□□□□ -0.12
PTPRF-207ENST00000436724 CDIP1Q9H305 208 aa14.3□□□□□ -0.12
PTPRF-207ENST00000436724 UBE2WQ96B02 151 aa14.29□□□□□ -0.12
PTPRF-207ENST00000436724 M0QXV9 152 aa14.29□□□□□ -0.12
PTPRF-207ENST00000436724 ATXN8Q156A1 80 aa14.29□□□□□ -0.12
PTPRF-207ENST00000436724 PRKDCP78527 4128 aaKnown RBP14.29□□□□□ -0.12
PTPRF-207ENST00000436724 COX7A2LO14548 114 aa14.27□□□□□ -0.13
PTPRF-207ENST00000436724 SCGB1A1P11684 91 aa14.27□□□□□ -0.13
PTPRF-207ENST00000436724 LINC01620Q4KN68 170 aa14.27□□□□□ -0.13
PTPRF-207ENST00000436724 C15orf53Q8NAA6 179 aa14.27□□□□□ -0.13
PTPRF-207ENST00000436724 MEIG1Q5JSS6 88 aa14.26□□□□□ -0.13
PTPRF-207ENST00000436724 CRPP02741 224 aa14.25□□□□□ -0.13
PTPRF-207ENST00000436724 CIRBPQ14011 172 aaKnown RBP14.25□□□□□ -0.13
PTPRF-207ENST00000436724 LINC01600Q96MT4 127 aa14.24□□□□□ -0.13
PTPRF-207ENST00000436724 HERV-K104P63124 156 aa14.24□□□□□ -0.13
PTPRF-207ENST00000436724 C6orf226Q5I0X4 101 aa14.24□□□□□ -0.13
PTPRF-207ENST00000436724 LINC00308Q8TCZ7 52 aa14.24□□□□□ -0.13
PTPRF-207ENST00000436724 LINC00588Q9Y4M8 146 aa14.24□□□□□ -0.13
PTPRF-207ENST00000436724 MALP21145 153 aa14.23□□□□□ -0.13
PTPRF-207ENST00000436724 C2orf82Q6UX34 121 aa14.23□□□□□ -0.13
PTPRF-207ENST00000436724 LYSTQ99698 3801 aa14.22□□□□□ -0.13
PTPRF-207ENST00000436724 RPL13AP40429 203 aaKnown RBP14.22□□□□□ -0.13
PTPRF-207ENST00000436724 LINC01556Q5JQF7 62 aa14.22□□□□□ -0.13
PTPRF-207ENST00000436724 TRBV10-2A0A0K0K1G8 114 aa14.21□□□□□ -0.13
PTPRF-207ENST00000436724 SOSTDC1Q6X4U4 206 aa14.21□□□□□ -0.13
PTPRF-207ENST00000436724 Q8IZM0 81 aa14.21□□□□□ -0.13
PTPRF-207ENST00000436724 LINC01561Q8N1V8 128 aa14.21□□□□□ -0.13
PTPRF-207ENST00000436724 CSMD3Q7Z407 3707 aa14.2□□□□□ -0.14
PTPRF-207ENST00000436724 KIAA0087Q14695 138 aa14.2□□□□□ -0.14
PTPRF-207ENST00000436724 COX6CP09669 75 aa14.19□□□□□ -0.14
PTPRF-207ENST00000436724 NTN5Q8WTR8 489 aaPredicted RBP14.19□□□□□ -0.14
PTPRF-207ENST00000436724 CLEC2BQ92478 149 aa14.19□□□□□ -0.14
PTPRF-207ENST00000436724 TRAV8-4A0A0B4J246 113 aa14.18□□□□□ -0.14
PTPRF-207ENST00000436724 CCL18P55774 89 aa14.17□□□□□ -0.14
PTPRF-207ENST00000436724 LINC00526Q96FQ7 95 aa14.17□□□□□ -0.14
PTPRF-207ENST00000436724 DNAH10OSP0CZ25 163 aa14.17□□□□□ -0.14
PTPRF-207ENST00000436724 XGP55808 180 aa14.17□□□□□ -0.14
PTPRF-207ENST00000436724 MT-ATP8P03928 68 aa14.16□□□□□ -0.14
PTPRF-207ENST00000436724 PFN2P35080 140 aa14.16□□□□□ -0.14
PTPRF-207ENST00000436724 CKS1BP61024 79 aa14.16□□□□□ -0.14
PTPRF-207ENST00000436724 LST1O00453 97 aa14.15□□□□□ -0.14
PTPRF-207ENST00000436724 LINC00158P58513 81 aa14.15□□□□□ -0.14
PTPRF-207ENST00000436724 KRTAP26-1Q6PEX3 210 aa14.15□□□□□ -0.14
PTPRF-207ENST00000436724 MIR7-3HGQ8N6C7 128 aa14.15□□□□□ -0.14
PTPRF-207ENST00000436724 NHLRC4P0CG21 123 aaPredicted RBP14.15□□□□□ -0.15
PTPRF-207ENST00000436724 C6orf223Q8N319 242 aa14.15□□□□□ -0.15
PTPRF-207ENST00000436724 TENM2Q9NT68 2774 aa14.14□□□□□ -0.15
PTPRF-207ENST00000436724 CFAP161Q6P656 301 aa14.14□□□□□ -0.15
PTPRF-207ENST00000436724 TEX49A0A1B0GTD5 131 aa14.13□□□□□ -0.15
PTPRF-207ENST00000436724 Q9HAA7 133 aa14.13□□□□□ -0.15
PTPRF-207ENST00000436724 KLK5Q9Y337 293 aaPredicted RBP14.13□□□□□ -0.15
PTPRF-207ENST00000436724 IBA57-AS1B1ANH7 110 aa14.12□□□□□ -0.15
PTPRF-207ENST00000436724 SPAG11BQ08648 103 aa14.12□□□□□ -0.15
PTPRF-207ENST00000436724 COPS9Q8WXC6 57 aa14.12□□□□□ -0.15
PTPRF-207ENST00000436724 IGKV2D-24A0A075B6R9 120 aa14.1□□□□□ -0.15
PTPRF-207ENST00000436724 C9orf116Q5BN46 136 aaPredicted RBP14.1□□□□□ -0.15
PTPRF-207ENST00000436724 C1orf43Q9BWL3 253 aa14.1□□□□□ -0.15
PTPRF-207ENST00000436724 H3BT86 120 aa14.1□□□□□ -0.15
PTPRF-207ENST00000436724 KRTAP21-3Q3LHN1 58 aa14.1□□□□□ -0.15
PTPRF-207ENST00000436724 C10orf25Q5T742 122 aa14.09□□□□□ -0.15
PTPRF-207ENST00000436724 PPDPFQ9H3Y8 114 aa14.09□□□□□ -0.15
PTPRF-207ENST00000436724 CXCL5P42830 114 aa14.08□□□□□ -0.16
PTPRF-207ENST00000436724 UNQ6190/PRO20217Q6UXQ8 127 aa14.08□□□□□ -0.16
PTPRF-207ENST00000436724 APLNQ9ULZ1 77 aa14.08□□□□□ -0.16
PTPRF-207ENST00000436724 DYNC2H1Q8NCM8 4307 aaKnown RBP14.08□□□□□ -0.16
PTPRF-207ENST00000436724 HIGD2BQ4VC39 106 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms