RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 GNB1LQ9BYB4 327 aa9.55□□□□□ -0.88
NUP50-210ENST00000434760 TOMM7Q9P0U1 55 aa9.55□□□□□ -0.88
NUP50-210ENST00000434760 IGLV5-45A0A087WSX0 123 aa9.54□□□□□ -0.88
NUP50-210ENST00000434760 SMIM1B2RUZ4 78 aa9.54□□□□□ -0.88
NUP50-210ENST00000434760 H0Y9J4 135 aa9.54□□□□□ -0.88
NUP50-210ENST00000434760 PRSS2P07478 247 aa9.54□□□□□ -0.88
NUP50-210ENST00000434760 SEC11AP67812 179 aa9.54□□□□□ -0.88
NUP50-210ENST00000434760 COMMD7Q86VX2 200 aa9.54□□□□□ -0.88
NUP50-210ENST00000434760 KRTAP1-4P0C5Y4 121 aa9.53□□□□□ -0.88
NUP50-210ENST00000434760 G0S2P27469 103 aa9.53□□□□□ -0.88
NUP50-210ENST00000434760 C10orf91Q5T1B1 145 aa9.53□□□□□ -0.88
NUP50-210ENST00000434760 DIRC1Q969H9 104 aa9.53□□□□□ -0.88
NUP50-210ENST00000434760 F8VRH5 84 aa9.52□□□□□ -0.89
NUP50-210ENST00000434760 CKS1BP61024 79 aa9.52□□□□□ -0.89
NUP50-210ENST00000434760 SCGB3A1Q96QR1 104 aa9.52□□□□□ -0.89
NUP50-210ENST00000434760 GEMIN7Q9H840 131 aaKnown RBP9.52□□□□□ -0.89
NUP50-210ENST00000434760 CARHSP1Q9Y2V2 147 aaKnown RBP9.52□□□□□ -0.89
NUP50-210ENST00000434760 S100PP25815 95 aa9.51□□□□□ -0.89
NUP50-210ENST00000434760 LINC00469Q8N7U9 141 aa9.51□□□□□ -0.89
NUP50-210ENST00000434760 LPAP08519 4548 aa9.5□□□□□ -0.89
NUP50-210ENST00000434760 TINCRA0A1B0GVN0 87 aa9.5□□□□□ -0.89
NUP50-210ENST00000434760 CXCL5P42830 114 aa9.5□□□□□ -0.89
NUP50-210ENST00000434760 UBE2BP63146 152 aa9.5□□□□□ -0.89
NUP50-210ENST00000434760 C6orf226Q5I0X4 101 aa9.5□□□□□ -0.89
NUP50-210ENST00000434760 XAGE1AQ9HD64 81 aa9.5□□□□□ -0.89
NUP50-210ENST00000434760 RHEBQ15382 184 aa9.49□□□□□ -0.89
NUP50-210ENST00000434760 COX19Q49B96 90 aa9.49□□□□□ -0.89
NUP50-210ENST00000434760 PRR26Q8N8Z3 221 aa9.49□□□□□ -0.89
NUP50-210ENST00000434760 MRPL18Q9H0U6 180 aaKnown RBP9.49□□□□□ -0.89
NUP50-210ENST00000434760 A0A096LNJ9 63 aa9.48□□□□□ -0.89
NUP50-210ENST00000434760 LINC01549A6NIU2 74 aa9.48□□□□□ -0.89
NUP50-210ENST00000434760 CST9LQ9H4G1 147 aa9.48□□□□□ -0.89
NUP50-210ENST00000434760 PDZD11Q5EBL8 140 aa9.47□□□□□ -0.89
NUP50-210ENST00000434760 C22orf24Q9Y442 160 aa9.47□□□□□ -0.89
NUP50-210ENST00000434760 PMVKQ15126 192 aa9.46□□□□□ -0.9
NUP50-210ENST00000434760 FA2HQ7L5A8 372 aa9.46□□□□□ -0.9
NUP50-210ENST00000434760 COX7B2Q8TF08 81 aa9.46□□□□□ -0.9
NUP50-210ENST00000434760 URB1-AS1Q96HZ7 61 aa9.46□□□□□ -0.9
NUP50-210ENST00000434760 TP73-AS1Q9UF72 201 aa9.46□□□□□ -0.9
NUP50-210ENST00000434760 SPINK8P0C7L1 97 aa9.45□□□□□ -0.9
NUP50-210ENST00000434760 FABP9Q0Z7S8 132 aa9.45□□□□□ -0.9
NUP50-210ENST00000434760 RPS10P5Q9NQ39 176 aa9.45□□□□□ -0.9
NUP50-210ENST00000434760 C18orf32Q8TCD1 76 aa9.44□□□□□ -0.9
NUP50-210ENST00000434760 SMCO4Q9NRQ5 59 aa9.44□□□□□ -0.9
NUP50-210ENST00000434760 IGLV1-50A0A075B6I6 118 aa9.43□□□□□ -0.9
NUP50-210ENST00000434760 NUPR1O60356 82 aa9.43□□□□□ -0.9
NUP50-210ENST00000434760 IGLC3P0DOY3 106 aa9.43□□□□□ -0.9
NUP50-210ENST00000434760 MRPL55Q7Z7F7 128 aaKnown RBP9.43□□□□□ -0.9
NUP50-210ENST00000434760 IGLV5-39A0A0G2JS06 123 aa9.42□□□□□ -0.9
NUP50-210ENST00000434760 IGLV5-37A0A075B6J1 123 aa9.41□□□□□ -0.9
NUP50-210ENST00000434760 ZNF861PO60384 105 aa9.41□□□□□ -0.9
NUP50-210ENST00000434760 ZNF22P17026 224 aaPredicted RBP9.4□□□□□ -0.9
NUP50-210ENST00000434760 LBHQ53QV2 105 aaPredicted RBP9.4□□□□□ -0.9
NUP50-210ENST00000434760 HBDP02042 147 aa9.39□□□□□ -0.91
NUP50-210ENST00000434760 H3BRM9 83 aa9.38□□□□□ -0.91
NUP50-210ENST00000434760 PMCHL1Q16048 86 aa9.38□□□□□ -0.91
NUP50-210ENST00000434760 TRAPPC1Q9Y5R8 145 aa9.38□□□□□ -0.91
NUP50-210ENST00000434760 BCE1O60756 84 aa9.37□□□□□ -0.91
NUP50-210ENST00000434760 LINC00614P0C842 121 aa9.37□□□□□ -0.91
NUP50-210ENST00000434760 KRTAP13-1Q8IUC0 172 aa9.37□□□□□ -0.91
NUP50-210ENST00000434760 LINC00167Q96N53 147 aa9.37□□□□□ -0.91
NUP50-210ENST00000434760 RPL13AP40429 203 aaKnown RBP9.36□□□□□ -0.91
NUP50-210ENST00000434760 YPEL4Q96NS1 127 aa9.36□□□□□ -0.91
NUP50-210ENST00000434760 C11orf86A6NJI1 115 aa9.35□□□□□ -0.91
NUP50-210ENST00000434760 RPL37AP8A6NKH3 93 aa9.35□□□□□ -0.91
NUP50-210ENST00000434760 ATP5LO75964 103 aa9.35□□□□□ -0.91
NUP50-210ENST00000434760 APOC3P02656 99 aa9.35□□□□□ -0.91
NUP50-210ENST00000434760 RAB5BP61020 215 aa9.35□□□□□ -0.91
NUP50-210ENST00000434760 A0A087X002 238 aa9.34□□□□□ -0.91
NUP50-210ENST00000434760 GAGE10A6NGK3 116 aa9.34□□□□□ -0.91
NUP50-210ENST00000434760 SCO1O75880 301 aa9.33□□□□□ -0.92
NUP50-210ENST00000434760 RPL28P46779 137 aaKnown RBP9.33□□□□□ -0.92
NUP50-210ENST00000434760 SVBPQ8N300 66 aa9.33□□□□□ -0.92
NUP50-210ENST00000434760 Q8NDZ9 215 aa9.33□□□□□ -0.92
NUP50-210ENST00000434760 SNAPINO95295 136 aa9.32□□□□□ -0.92
NUP50-210ENST00000434760 VPREB1P12018 145 aa9.32□□□□□ -0.92
NUP50-210ENST00000434760 NDUFA6P56556 154 aa9.32□□□□□ -0.92
NUP50-210ENST00000434760 ERG28Q9UKR5 140 aa9.32□□□□□ -0.92
NUP50-210ENST00000434760 PFN2P35080 140 aa9.31□□□□□ -0.92
NUP50-210ENST00000434760 NKAPP1Q8N9T2 125 aa9.31□□□□□ -0.92
NUP50-210ENST00000434760 ZNF625Q96I27 306 aaPredicted RBP9.31□□□□□ -0.92
NUP50-210ENST00000434760 SND1-IT1Q9HBX3 110 aa9.31□□□□□ -0.92
NUP50-210ENST00000434760 BAGE3Q86Y29 109 aa9.3□□□□□ -0.92
NUP50-210ENST00000434760 IGKV2-28A0A075B6P5 120 aa9.29□□□□□ -0.92
NUP50-210ENST00000434760 IGKV2D-28P01615 120 aa9.29□□□□□ -0.92
NUP50-210ENST00000434760 NDUFA5Q16718 116 aa9.29□□□□□ -0.92
NUP50-210ENST00000434760 COX17Q14061 63 aa9.28□□□□□ -0.92
NUP50-210ENST00000434760 TMEM170BQ5T4T1 132 aa9.28□□□□□ -0.92
NUP50-210ENST00000434760 SFTA2Q6UW10 78 aa9.27□□□□□ -0.93
NUP50-210ENST00000434760 TRAV12-1A0A0B4J245 112 aa9.26□□□□□ -0.93
NUP50-210ENST00000434760 KRTAP13-2Q52LG2 175 aa9.26□□□□□ -0.93
NUP50-210ENST00000434760 CHCHD1Q96BP2 118 aaKnown RBP9.26□□□□□ -0.93
NUP50-210ENST00000434760 CHTOPQ9Y3Y2 248 aaKnown RBP9.26□□□□□ -0.93
NUP50-210ENST00000434760 TMEM223A0PJW6 202 aa9.25□□□□□ -0.93
NUP50-210ENST00000434760 UBE2AP49459 152 aa9.25□□□□□ -0.93
NUP50-210ENST00000434760 TMEM126AQ9H061 195 aa9.25□□□□□ -0.93
NUP50-210ENST00000434760 ANAPC11Q9NYG5 84 aa9.25□□□□□ -0.93
NUP50-210ENST00000434760 TMEM238C9JI98 176 aa9.24□□□□□ -0.93
NUP50-210ENST00000434760 M0R378 163 aa9.24□□□□□ -0.93
NUP50-210ENST00000434760 CRYGAP11844 174 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms