RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 TIMM17AQ99595 171 aa13.3□□□□□ -0.28
RPUSD3-206ENST00000433535 IGLV7-43P04211 117 aa13.29□□□□□ -0.28
RPUSD3-206ENST00000433535 C2orf82Q6UX34 121 aa13.29□□□□□ -0.28
RPUSD3-206ENST00000433535 TEX43Q6ZNM6 134 aa13.29□□□□□ -0.28
RPUSD3-206ENST00000433535 ERASQ7Z444 233 aa13.29□□□□□ -0.28
RPUSD3-206ENST00000433535 UBE2D1P51668 147 aa13.28□□□□□ -0.28
RPUSD3-206ENST00000433535 Q6ZN92 141 aa13.28□□□□□ -0.28
RPUSD3-206ENST00000433535 KRTAP7-1Q8IUC3 87 aa13.28□□□□□ -0.28
RPUSD3-206ENST00000433535 VCX2Q9H322 139 aa13.28□□□□□ -0.28
RPUSD3-206ENST00000433535 A0A096LNJ9 63 aa13.26□□□□□ -0.29
RPUSD3-206ENST00000433535 LINC01549A6NIU2 74 aa13.26□□□□□ -0.29
RPUSD3-206ENST00000433535 LINC00614P0C842 121 aa13.26□□□□□ -0.29
RPUSD3-206ENST00000433535 SCGB3A1Q96QR1 104 aa13.26□□□□□ -0.29
RPUSD3-206ENST00000433535 TRBV30A0A0K0K1B3 111 aa13.25□□□□□ -0.29
RPUSD3-206ENST00000433535 COLCA2A8K830 154 aa13.25□□□□□ -0.29
RPUSD3-206ENST00000433535 M0QXV9 152 aa13.25□□□□□ -0.29
RPUSD3-206ENST00000433535 FAM19A3Q7Z5A8 133 aa13.25□□□□□ -0.29
RPUSD3-206ENST00000433535 DIRC1Q969H9 104 aa13.25□□□□□ -0.29
RPUSD3-206ENST00000433535 C2orf88Q9BSF0 95 aa13.25□□□□□ -0.29
RPUSD3-206ENST00000433535 PAPPA-AS1Q5QFB9 102 aa13.24□□□□□ -0.29
RPUSD3-206ENST00000433535 PRR26Q8N8Z3 221 aa13.24□□□□□ -0.29
RPUSD3-206ENST00000433535 NDUFC2-KCTD14E9PQ53 114 aa13.22□□□□□ -0.29
RPUSD3-206ENST00000433535 TRGC2P03986 189 aa13.22□□□□□ -0.29
RPUSD3-206ENST00000433535 C9orf129Q5T035 196 aaKnown RBP13.22□□□□□ -0.29
RPUSD3-206ENST00000433535 PACRGQ96M98 296 aaPredicted RBP13.22□□□□□ -0.29
RPUSD3-206ENST00000433535 H0Y9J4 135 aa13.21□□□□□ -0.29
RPUSD3-206ENST00000433535 RAB5BP61020 215 aa13.21□□□□□ -0.29
RPUSD3-206ENST00000433535 UBE2BP63146 152 aa13.21□□□□□ -0.29
RPUSD3-206ENST00000433535 SCO1O75880 301 aa13.2□□□□□ -0.3
RPUSD3-206ENST00000433535 LINC01561Q8N1V8 128 aa13.2□□□□□ -0.3
RPUSD3-206ENST00000433535 TOMM7Q9P0U1 55 aa13.2□□□□□ -0.3
RPUSD3-206ENST00000433535 PMCHL1Q16048 86 aa13.19□□□□□ -0.3
RPUSD3-206ENST00000433535 HBDP02042 147 aa13.18□□□□□ -0.3
RPUSD3-206ENST00000433535 PRSS2P07478 247 aa13.18□□□□□ -0.3
RPUSD3-206ENST00000433535 PDZD11Q5EBL8 140 aa13.18□□□□□ -0.3
RPUSD3-206ENST00000433535 CST9LQ9H4G1 147 aa13.18□□□□□ -0.3
RPUSD3-206ENST00000433535 CHCHD1Q96BP2 118 aaKnown RBP13.17□□□□□ -0.3
RPUSD3-206ENST00000433535 CKS1BP61024 79 aa13.16□□□□□ -0.3
RPUSD3-206ENST00000433535 LINC00469Q8N7U9 141 aa13.16□□□□□ -0.3
RPUSD3-206ENST00000433535 KRTAP1-4P0C5Y4 121 aa13.15□□□□□ -0.3
RPUSD3-206ENST00000433535 HERVK_113P63121 156 aa13.15□□□□□ -0.3
RPUSD3-206ENST00000433535 SEC11AP67812 179 aa13.15□□□□□ -0.3
RPUSD3-206ENST00000433535 PMVKQ15126 192 aa13.15□□□□□ -0.3
RPUSD3-206ENST00000433535 Q8IZM0 81 aa13.14□□□□□ -0.31
RPUSD3-206ENST00000433535 CDKN2A-AS1Q9UH64 79 aa13.14□□□□□ -0.31
RPUSD3-206ENST00000433535 TINCRA0A1B0GVN0 87 aa13.13□□□□□ -0.31
RPUSD3-206ENST00000433535 C6orf226Q5I0X4 101 aa13.13□□□□□ -0.31
RPUSD3-206ENST00000433535 RNF213Q63HN8 5207 aa13.13□□□□□ -0.31
RPUSD3-206ENST00000433535 GEMIN7Q9H840 131 aaKnown RBP13.12□□□□□ -0.31
RPUSD3-206ENST00000433535 XAGE1AQ9HD64 81 aa13.12□□□□□ -0.31
RPUSD3-206ENST00000433535 IGLV1-50A0A075B6I6 118 aa13.11□□□□□ -0.31
RPUSD3-206ENST00000433535 IGLV5-45A0A087WSX0 123 aa13.11□□□□□ -0.31
RPUSD3-206ENST00000433535 LINC00310P59036 64 aa13.11□□□□□ -0.31
RPUSD3-206ENST00000433535 BAGE3Q86Y29 109 aa13.11□□□□□ -0.31
RPUSD3-206ENST00000433535 ATP5LO75964 103 aa13.1□□□□□ -0.31
RPUSD3-206ENST00000433535 C22orf24Q9Y442 160 aa13.08□□□□□ -0.32
RPUSD3-206ENST00000433535 F8VRH5 84 aa13.07□□□□□ -0.32
RPUSD3-206ENST00000433535 HSBP1O75506 76 aa13.07□□□□□ -0.32
RPUSD3-206ENST00000433535 SERF1AO75920 110 aa13.07□□□□□ -0.32
RPUSD3-206ENST00000433535 IGLC3P0DOY3 106 aa13.07□□□□□ -0.32
RPUSD3-206ENST00000433535 FAM19A2Q8N3H0 131 aa13.07□□□□□ -0.32
RPUSD3-206ENST00000433535 NDUFA6P56556 154 aa13.06□□□□□ -0.32
RPUSD3-206ENST00000433535 SMIM1B2RUZ4 78 aa13.05□□□□□ -0.32
RPUSD3-206ENST00000433535 NUPR1O60356 82 aa13.05□□□□□ -0.32
RPUSD3-206ENST00000433535 ZNF861PO60384 105 aa13.04□□□□□ -0.32
RPUSD3-206ENST00000433535 IFI27L1Q96BM0 104 aa13.03□□□□□ -0.32
RPUSD3-206ENST00000433535 LPAP08519 4548 aa13.02□□□□□ -0.32
RPUSD3-206ENST00000433535 RPL13AP40429 203 aaKnown RBP13.02□□□□□ -0.33
RPUSD3-206ENST00000433535 CXCL5P42830 114 aa13.02□□□□□ -0.33
RPUSD3-206ENST00000433535 LBHQ53QV2 105 aaPredicted RBP13.02□□□□□ -0.33
RPUSD3-206ENST00000433535 HIST1H2BKO60814 126 aa13.01□□□□□ -0.33
RPUSD3-206ENST00000433535 HIST1H2BJP06899 126 aa13.01□□□□□ -0.33
RPUSD3-206ENST00000433535 HIST1H2BOP23527 126 aa13.01□□□□□ -0.33
RPUSD3-206ENST00000433535 HIST1H2BBP33778 126 aa13.01□□□□□ -0.33
RPUSD3-206ENST00000433535 HIST1H2BDP58876 126 aa13.01□□□□□ -0.33
RPUSD3-206ENST00000433535 HIST1H2BCP62807 126 aa13.01□□□□□ -0.33
RPUSD3-206ENST00000433535 HIST2H2BEQ16778 126 aa13.01□□□□□ -0.33
RPUSD3-206ENST00000433535 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.01□□□□□ -0.33
RPUSD3-206ENST00000433535 MRPL55Q7Z7F7 128 aaKnown RBP13.01□□□□□ -0.33
RPUSD3-206ENST00000433535 HIST1H2BHQ93079 126 aa13.01□□□□□ -0.33
RPUSD3-206ENST00000433535 HIST1H2BNQ99877 126 aa13.01□□□□□ -0.33
RPUSD3-206ENST00000433535 HIST1H2BMQ99879 126 aa13.01□□□□□ -0.33
RPUSD3-206ENST00000433535 TRAV12-1A0A0B4J245 112 aa13□□□□□ -0.33
RPUSD3-206ENST00000433535 SPINK8P0C7L1 97 aa13□□□□□ -0.33
RPUSD3-206ENST00000433535 ZNF22P17026 224 aaPredicted RBP13□□□□□ -0.33
RPUSD3-206ENST00000433535 COX7B2Q8TF08 81 aa13□□□□□ -0.33
RPUSD3-206ENST00000433535 C11orf86A6NJI1 115 aa12.99□□□□□ -0.33
RPUSD3-206ENST00000433535 S100A1P23297 94 aa12.99□□□□□ -0.33
RPUSD3-206ENST00000433535 TP73-AS1Q9UF72 201 aa12.99□□□□□ -0.33
RPUSD3-206ENST00000433535 H3BRM9 83 aa12.98□□□□□ -0.33
RPUSD3-206ENST00000433535 ATP6V1G1O75348 118 aa12.98□□□□□ -0.33
RPUSD3-206ENST00000433535 CHTOPQ9Y3Y2 248 aaKnown RBP12.98□□□□□ -0.33
RPUSD3-206ENST00000433535 IGLV5-39A0A0G2JS06 123 aa12.97□□□□□ -0.33
RPUSD3-206ENST00000433535 RPL37AP8A6NKH3 93 aa12.96□□□□□ -0.33
RPUSD3-206ENST00000433535 LEPROTL1O95214 131 aa12.96□□□□□ -0.33
RPUSD3-206ENST00000433535 BCE1O60756 84 aa12.95□□□□□ -0.34
RPUSD3-206ENST00000433535 PRR4Q16378 134 aa12.95□□□□□ -0.34
RPUSD3-206ENST00000433535 GAGE10A6NGK3 116 aa12.94□□□□□ -0.34
RPUSD3-206ENST00000433535 LINC00167Q96N53 147 aa12.94□□□□□ -0.34
RPUSD3-206ENST00000433535 RPL28P46779 137 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms