RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 TIMM17AQ99595 171 aa3.67□□□□□ -1.82
HMGB3P24-201ENST00000433260 GEMIN7Q9H840 131 aaKnown RBP3.67□□□□□ -1.82
HMGB3P24-201ENST00000433260 TOMM7Q9P0U1 55 aa3.67□□□□□ -1.82
HMGB3P24-201ENST00000433260 HECTD4Q9Y4D8 3996 aa3.67□□□□□ -1.82
HMGB3P24-201ENST00000433260 DNAH11Q96DT5 4516 aa3.67□□□□□ -1.82
HMGB3P24-201ENST00000433260 DYNC1H1Q14204 4646 aaKnown RBP3.66□□□□□ -1.82
HMGB3P24-201ENST00000433260 A0A087WZ39 114 aa3.66□□□□□ -1.82
HMGB3P24-201ENST00000433260 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P24-201ENST00000433260 ATP6V1G1O75348 118 aa3.66□□□□□ -1.82
HMGB3P24-201ENST00000433260 SCO1O75880 301 aa3.66□□□□□ -1.82
HMGB3P24-201ENST00000433260 TRGC2P03986 189 aa3.66□□□□□ -1.82
HMGB3P24-201ENST00000433260 RPL18AQ02543 176 aaKnown RBP3.66□□□□□ -1.82
HMGB3P24-201ENST00000433260 C10orf25Q5T742 122 aa3.66□□□□□ -1.82
HMGB3P24-201ENST00000433260 C2orf82Q6UX34 121 aa3.66□□□□□ -1.82
HMGB3P24-201ENST00000433260 OR10D4PQ8NGN7 298 aa3.66□□□□□ -1.82
HMGB3P24-201ENST00000433260 CST9LQ9H4G1 147 aa3.66□□□□□ -1.82
HMGB3P24-201ENST00000433260 CDKN2A-AS1Q9UH64 79 aa3.66□□□□□ -1.82
HMGB3P24-201ENST00000433260 A0A096LNJ9 63 aa3.65□□□□□ -1.83
HMGB3P24-201ENST00000433260 LOC107984640A0A0U1RRK4 108 aa3.65□□□□□ -1.83
HMGB3P24-201ENST00000433260 COLCA2A8K830 154 aa3.65□□□□□ -1.83
HMGB3P24-201ENST00000433260 NDUFA1O15239 70 aa3.65□□□□□ -1.83
HMGB3P24-201ENST00000433260 PRSS2P07478 247 aa3.65□□□□□ -1.83
HMGB3P24-201ENST00000433260 RAB5BP61020 215 aa3.65□□□□□ -1.83
HMGB3P24-201ENST00000433260 HERVK_113P63121 156 aa3.65□□□□□ -1.83
HMGB3P24-201ENST00000433260 KIAA0087Q14695 138 aa3.65□□□□□ -1.83
HMGB3P24-201ENST00000433260 PMVKQ15126 192 aa3.65□□□□□ -1.83
HMGB3P24-201ENST00000433260 GAGE2EQ4V326 116 aa3.65□□□□□ -1.83
HMGB3P24-201ENST00000433260 C6orf226Q5I0X4 101 aa3.65□□□□□ -1.83
HMGB3P24-201ENST00000433260 BAGE3Q86Y29 109 aa3.65□□□□□ -1.83
HMGB3P24-201ENST00000433260 SPACA4Q8TDM5 124 aa3.65□□□□□ -1.83
HMGB3P24-201ENST00000433260 C2orf48Q96LS8 159 aa3.65□□□□□ -1.83
HMGB3P24-201ENST00000433260 PACRGQ96M98 296 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P24-201ENST00000433260 GAGE2DQ9UEU5 116 aa3.65□□□□□ -1.83
HMGB3P24-201ENST00000433260 RYR1P21817 5038 aa3.65□□□□□ -1.83
HMGB3P24-201ENST00000433260 HERC2O95714 4834 aa3.65□□□□□ -1.83
HMGB3P24-201ENST00000433260 TINCRA0A1B0GVN0 87 aa3.64□□□□□ -1.83
HMGB3P24-201ENST00000433260 LINC01549A6NIU2 74 aa3.64□□□□□ -1.83
HMGB3P24-201ENST00000433260 HBDP02042 147 aa3.64□□□□□ -1.83
HMGB3P24-201ENST00000433260 CKS1BP61024 79 aa3.64□□□□□ -1.83
HMGB3P24-201ENST00000433260 RPL37AP61513 92 aaKnown RBP3.64□□□□□ -1.83
HMGB3P24-201ENST00000433260 SEC11AP67812 179 aa3.64□□□□□ -1.83
HMGB3P24-201ENST00000433260 CIRBPQ14011 172 aaKnown RBP3.64□□□□□ -1.83
HMGB3P24-201ENST00000433260 C9orf116Q5BN46 136 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P24-201ENST00000433260 PDZD11Q5EBL8 140 aa3.64□□□□□ -1.83
HMGB3P24-201ENST00000433260 FAM19A3Q7Z5A8 133 aa3.64□□□□□ -1.83
HMGB3P24-201ENST00000433260 FAM19A2Q8N3H0 131 aa3.64□□□□□ -1.83
HMGB3P24-201ENST00000433260 KRTAP9-3Q9BYQ3 159 aa3.64□□□□□ -1.83
HMGB3P24-201ENST00000433260 C6orf48Q9UBA6 75 aa3.64□□□□□ -1.83
HMGB3P24-201ENST00000433260 DNAH5Q8TE73 4624 aa3.63□□□□□ -1.83
HMGB3P24-201ENST00000433260 A0A1W2PNN7 141 aa3.63□□□□□ -1.83
HMGB3P24-201ENST00000433260 HSBP1O75506 76 aa3.63□□□□□ -1.83
HMGB3P24-201ENST00000433260 SPINK8P0C7L1 97 aa3.63□□□□□ -1.83
HMGB3P24-201ENST00000433260 CHCHD1Q96BP2 118 aaKnown RBP3.63□□□□□ -1.83
HMGB3P24-201ENST00000433260 MRPL35Q9NZE8 188 aaKnown RBP3.63□□□□□ -1.83
HMGB3P24-201ENST00000433260 PLAC8Q9NZF1 115 aa3.63□□□□□ -1.83
HMGB3P24-201ENST00000433260 PKIGQ9Y2B9 76 aa3.63□□□□□ -1.83
HMGB3P24-201ENST00000433260 FAM168BA1KXE4 195 aa3.62□□□□□ -1.83
HMGB3P24-201ENST00000433260 NUPR1O60356 82 aa3.62□□□□□ -1.83
HMGB3P24-201ENST00000433260 ATP5LO75964 103 aa3.62□□□□□ -1.83
HMGB3P24-201ENST00000433260 KRTAP10-4P60372 401 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P24-201ENST00000433260 SERTAD4-AS1Q5TG53 156 aa3.62□□□□□ -1.83
HMGB3P24-201ENST00000433260 Q6ZRP5 223 aa3.62□□□□□ -1.83
HMGB3P24-201ENST00000433260 LINC01561Q8N1V8 128 aa3.62□□□□□ -1.83
HMGB3P24-201ENST00000433260 COX7B2Q8TF08 81 aa3.62□□□□□ -1.83
HMGB3P24-201ENST00000433260 C7orf33Q8WU49 177 aa3.62□□□□□ -1.83
HMGB3P24-201ENST00000433260 LINC00474Q9P2X8 69 aa3.62□□□□□ -1.83
HMGB3P24-201ENST00000433260 TRBV30A0A0K0K1B3 111 aa3.61□□□□□ -1.83
HMGB3P24-201ENST00000433260 SMIM1B2RUZ4 78 aa3.61□□□□□ -1.83
HMGB3P24-201ENST00000433260 H3BRM9 83 aa3.61□□□□□ -1.83
HMGB3P24-201ENST00000433260 SERF1AO75920 110 aa3.61□□□□□ -1.83
HMGB3P24-201ENST00000433260 IGLC3P0DOY3 106 aa3.61□□□□□ -1.83
HMGB3P24-201ENST00000433260 FABP4P15090 132 aa3.61□□□□□ -1.83
HMGB3P24-201ENST00000433260 HNRNPA3P51991 378 aaKnown RBP3.61□□□□□ -1.83
HMGB3P24-201ENST00000433260 VAMP3Q15836 100 aa3.61□□□□□ -1.83
HMGB3P24-201ENST00000433260 TMEM170BQ5T4T1 132 aa3.61□□□□□ -1.83
HMGB3P24-201ENST00000433260 PHF5AQ7RTV0 110 aaKnown RBP3.61□□□□□ -1.83
HMGB3P24-201ENST00000433260 FAM19A5Q7Z5A7 132 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P24-201ENST00000433260 Q8IZM0 81 aa3.61□□□□□ -1.83
HMGB3P24-201ENST00000433260 IFI27L1Q96BM0 104 aa3.61□□□□□ -1.83
HMGB3P24-201ENST00000433260 LRP1BQ9NZR2 4599 aa3.61□□□□□ -1.83
HMGB3P24-201ENST00000433260 PKHD1P08F94 4074 aa3.61□□□□□ -1.83
HMGB3P24-201ENST00000433260 IGLV5-45A0A087WSX0 123 aa3.6□□□□□ -1.83
HMGB3P24-201ENST00000433260 C11orf86A6NJI1 115 aa3.6□□□□□ -1.83
HMGB3P24-201ENST00000433260 LEPROTL1O95214 131 aa3.6□□□□□ -1.83
HMGB3P24-201ENST00000433260 ZNF22P17026 224 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P24-201ENST00000433260 ZNF625Q96I27 306 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P24-201ENST00000433260 XAGE1AQ9HD64 81 aa3.6□□□□□ -1.83
HMGB3P24-201ENST00000433260 PCLOQ9Y6V0 5065 aa3.59□□□□□ -1.83
HMGB3P24-201ENST00000433260 NDUFC2-KCTD14E9PQ53 114 aa3.59□□□□□ -1.83
HMGB3P24-201ENST00000433260 F8VRH5 84 aa3.59□□□□□ -1.83
HMGB3P24-201ENST00000433260 TLX1NBP0CAT3 122 aa3.59□□□□□ -1.83
HMGB3P24-201ENST00000433260 PFN2P35080 140 aa3.59□□□□□ -1.83
HMGB3P24-201ENST00000433260 C9orf129Q5T035 196 aaKnown RBP3.59□□□□□ -1.83
HMGB3P24-201ENST00000433260 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.83
HMGB3P24-201ENST00000433260 APOBP04114 4563 aaKnown RBP3.59□□□□□ -1.84
HMGB3P24-201ENST00000433260 ABCA13Q86UQ4 5058 aa3.58□□□□□ -1.84
HMGB3P24-201ENST00000433260 A0A0U1RRA0 63 aa3.58□□□□□ -1.84
HMGB3P24-201ENST00000433260 HIST1H2BKO60814 126 aa3.58□□□□□ -1.84
HMGB3P24-201ENST00000433260 HIST1H2BJP06899 126 aa3.58□□□□□ -1.84
HMGB3P24-201ENST00000433260 S100A1P23297 94 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms