RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 CHCHD10Q8WYQ3 142 aaPredicted RBP8.95□□□□□ -0.98
LRRTM1-206ENST00000433224 KIF25-AS1Q9Y6Z4 181 aa8.95□□□□□ -0.98
LRRTM1-206ENST00000433224 APCP25054 2843 aa8.95□□□□□ -0.98
LRRTM1-206ENST00000433224 LINC01546A6NGU7 62 aa8.94□□□□□ -0.98
LRRTM1-206ENST00000433224 NDUFA1O15239 70 aa8.94□□□□□ -0.98
LRRTM1-206ENST00000433224 MRPS36P82909 103 aaKnown RBP8.94□□□□□ -0.98
LRRTM1-206ENST00000433224 LYRM9A8MSI8 78 aa8.94□□□□□ -0.98
LRRTM1-206ENST00000433224 XAGE1AQ9HD64 81 aa8.94□□□□□ -0.98
LRRTM1-206ENST00000433224 HRNRQ86YZ3 2850 aaPredicted RBP8.94□□□□□ -0.98
LRRTM1-206ENST00000433224 H0YGX0 51 aa8.93□□□□□ -0.98
LRRTM1-206ENST00000433224 FSHBP01225 129 aa8.93□□□□□ -0.98
LRRTM1-206ENST00000433224 LINC00315P59091 139 aa8.93□□□□□ -0.98
LRRTM1-206ENST00000433224 Q8N2B8 174 aa8.93□□□□□ -0.98
LRRTM1-206ENST00000433224 A0A0J9YWU9 116 aa8.93□□□□□ -0.98
LRRTM1-206ENST00000433224 SMIM9A6NGZ8 99 aa8.93□□□□□ -0.98
LRRTM1-206ENST00000433224 MIFP14174 115 aa8.93□□□□□ -0.98
LRRTM1-206ENST00000433224 DEFB105AQ8NG35 78 aa8.93□□□□□ -0.98
LRRTM1-206ENST00000433224 C16orf95Q9H693 158 aa8.93□□□□□ -0.98
LRRTM1-206ENST00000433224 KPRPQ5T749 579 aaPredicted RBP8.92□□□□□ -0.98
LRRTM1-206ENST00000433224 IGLV4-60A0A075B6I1 120 aa8.92□□□□□ -0.98
LRRTM1-206ENST00000433224 SPANXDQ9BXN6 97 aa8.92□□□□□ -0.98
LRRTM1-206ENST00000433224 SPANXCQ9NY87 97 aa8.92□□□□□ -0.98
LRRTM1-206ENST00000433224 NIPBLQ6KC79 2804 aaeCLIP8.92□□□□□ -0.98
LRRTM1-206ENST00000433224 SMG1Q96Q15 3661 aaKnown RBP8.91□□□□□ -0.98
LRRTM1-206ENST00000433224 ATOX1O00244 68 aa8.91□□□□□ -0.98
LRRTM1-206ENST00000433224 IGKV2-24A0A0C4DH68 120 aa8.9□□□□□ -0.98
LRRTM1-206ENST00000433224 TIRAPP58753 221 aa8.9□□□□□ -0.98
LRRTM1-206ENST00000433224 COX6A2Q02221 97 aa8.9□□□□□ -0.99
LRRTM1-206ENST00000433224 Q6ZTC4 211 aa8.89□□□□□ -0.99
LRRTM1-206ENST00000433224 LINC00242Q5T6M2 205 aa8.89□□□□□ -0.99
LRRTM1-206ENST00000433224 DSCR8Q96T75 97 aa8.89□□□□□ -0.99
LRRTM1-206ENST00000433224 hADV29S1A0JD25 119 aa8.88□□□□□ -0.99
LRRTM1-206ENST00000433224 TRAV23DV6A0A075B6W5 121 aa8.88□□□□□ -0.99
LRRTM1-206ENST00000433224 KRTAP1-3Q8IUG1 177 aa8.88□□□□□ -0.99
LRRTM1-206ENST00000433224 CHCHD7Q9BUK0 85 aa8.88□□□□□ -0.99
LRRTM1-206ENST00000433224 FHL2Q14192 279 aa8.88□□□□□ -0.99
LRRTM1-206ENST00000433224 C11orf72Q8NBR9 251 aa8.88□□□□□ -0.99
LRRTM1-206ENST00000433224 CDC42SE2Q9NRR3 84 aa8.87□□□□□ -0.99
LRRTM1-206ENST00000433224 HIVEP1P15822 2718 aa8.87□□□□□ -0.99
LRRTM1-206ENST00000433224 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.87□□□□□ -0.99
LRRTM1-206ENST00000433224 GHRHP01286 108 aa8.86□□□□□ -0.99
LRRTM1-206ENST00000433224 KRTAP24-1Q3LI83 254 aa8.86□□□□□ -0.99
LRRTM1-206ENST00000433224 AMELXQ99217 191 aa8.86□□□□□ -0.99
LRRTM1-206ENST00000433224 LINC00959A0A1B0GUT2 108 aa8.86□□□□□ -0.99
LRRTM1-206ENST00000433224 FHL3Q13643 280 aa8.86□□□□□ -0.99
LRRTM1-206ENST00000433224 KIR2DL5BQ8NHK3 375 aa8.86□□□□□ -0.99
LRRTM1-206ENST00000433224 M0R2N4 97 aa8.85□□□□□ -0.99
LRRTM1-206ENST00000433224 UQCRQO14949 82 aa8.85□□□□□ -0.99
LRRTM1-206ENST00000433224 TIMM17BO60830 172 aa8.85□□□□□ -0.99
LRRTM1-206ENST00000433224 UBE2BP63146 152 aa8.85□□□□□ -0.99
LRRTM1-206ENST00000433224 C9orf116Q5BN46 136 aaPredicted RBP8.85□□□□□ -0.99
LRRTM1-206ENST00000433224 FAM19A4Q96LR4 140 aa8.85□□□□□ -0.99
LRRTM1-206ENST00000433224 CELA1Q9UNI1 258 aa8.85□□□□□ -0.99
LRRTM1-206ENST00000433224 SMIM1B2RUZ4 78 aa8.85□□□□□ -0.99
LRRTM1-206ENST00000433224 J3KT08 172 aa8.84□□□□□ -0.99
LRRTM1-206ENST00000433224 SMIM11BQ8TCY0 68 aa8.84□□□□□ -0.99
LRRTM1-206ENST00000433224 RMI2Q96E14 147 aa8.84□□□□□ -0.99
LRRTM1-206ENST00000433224 C3orf22Q8N5N4 141 aa8.84□□□□□ -0.99
LRRTM1-206ENST00000433224 BEAN1Q3B7T3 259 aa8.83□□□□□ -1
LRRTM1-206ENST00000433224 C20orf197Q8N268 126 aa8.82□□□□□ -1
LRRTM1-206ENST00000433224 A0A087WVE0 104 aa8.81□□□□□ -1
LRRTM1-206ENST00000433224 NTM-AS1Q6ZSK4 140 aa8.81□□□□□ -1
LRRTM1-206ENST00000433224 PRR3P79522 188 aaKnown RBP8.81□□□□□ -1
LRRTM1-206ENST00000433224 RBM3P98179 157 aaKnown RBP8.81□□□□□ -1
LRRTM1-206ENST00000433224 WFDC9Q8NEX5 89 aa8.81□□□□□ -1
LRRTM1-206ENST00000433224 KLK5Q9Y337 293 aaPredicted RBP8.81□□□□□ -1
LRRTM1-206ENST00000433224 Q8N3U1 123 aa8.81□□□□□ -1
LRRTM1-206ENST00000433224 ZNF575Q86XF7 245 aa8.8□□□□□ -1
LRRTM1-206ENST00000433224 JMJD7-PLA2G4BH0Y9G9 81 aa8.8□□□□□ -1
LRRTM1-206ENST00000433224 Q6Q795 121 aa8.8□□□□□ -1
LRRTM1-206ENST00000433224 ENHOQ6UWT2 76 aa8.8□□□□□ -1
LRRTM1-206ENST00000433224 UNQ6190/PRO20217Q6UXQ8 127 aa8.79□□□□□ -1
LRRTM1-206ENST00000433224 IBA57-AS1B1ANH7 110 aa8.79□□□□□ -1
LRRTM1-206ENST00000433224 C6orf99Q4VX62 202 aa8.79□□□□□ -1
LRRTM1-206ENST00000433224 FAM240AA0A1B0GVK7 77 aa8.79□□□□□ -1
LRRTM1-206ENST00000433224 SCXQ7RTU7 201 aa8.79□□□□□ -1
LRRTM1-206ENST00000433224 KRTAP10-3P60369 221 aa8.78□□□□□ -1
LRRTM1-206ENST00000433224 KRTAP1-1Q07627 177 aa8.78□□□□□ -1
LRRTM1-206ENST00000433224 LELP1Q5T871 98 aa8.78□□□□□ -1
LRRTM1-206ENST00000433224 TMEM256-PLSCR3K7ERE1 68 aa8.78□□□□□ -1
LRRTM1-206ENST00000433224 WFDC10BQ8IUB3 73 aa8.78□□□□□ -1
LRRTM1-206ENST00000433224 SPATA3Q8NHX4 192 aa8.78□□□□□ -1
LRRTM1-206ENST00000433224 A0A087WYN8 130 aa8.77□□□□□ -1
LRRTM1-206ENST00000433224 USP17L23D6RBM5 183 aa8.77□□□□□ -1
LRRTM1-206ENST00000433224 ETDCA0A1B0GVM5 59 aa8.77□□□□□ -1.01
LRRTM1-206ENST00000433224 CXCL5P42830 114 aa8.77□□□□□ -1.01
LRRTM1-206ENST00000433224 CD164L2Q6UWJ8 174 aa8.77□□□□□ -1.01
LRRTM1-206ENST00000433224 KLK9Q2XQG4 91 aa8.77□□□□□ -1.01
LRRTM1-206ENST00000433224 IMUPQ9GZP8 106 aa8.77□□□□□ -1.01
LRRTM1-206ENST00000433224 F8WEM9 126 aa8.77□□□□□ -1.01
LRRTM1-206ENST00000433224 C6orf223Q8N319 242 aa8.76□□□□□ -1.01
LRRTM1-206ENST00000433224 UPK3BQ9BT76 320 aa8.76□□□□□ -1.01
LRRTM1-206ENST00000433224 CUBNO60494 3623 aa8.76□□□□□ -1.01
LRRTM1-206ENST00000433224 TRAV10A0A0B4J240 114 aa8.76□□□□□ -1.01
LRRTM1-206ENST00000433224 EIF4EBP3O60516 100 aaPredicted RBP8.76□□□□□ -1.01
LRRTM1-206ENST00000433224 IGKV2-28A0A075B6P5 120 aa8.76□□□□□ -1.01
LRRTM1-206ENST00000433224 IGKV2D-28P01615 120 aa8.76□□□□□ -1.01
LRRTM1-206ENST00000433224 SBSPONQ8IVN8 264 aa8.76□□□□□ -1.01
LRRTM1-206ENST00000433224 CR1P17927 2039 aa8.75□□□□□ -1.01
LRRTM1-206ENST00000433224 COX7CP15954 63 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms