RNA–Protein interactions for RNA: ENST00000432331.1

LINC00390-201, long intergenic non-protein coding RNA 390, humanhuman

TSL 5 BASIC

Gene LINC00390, Length 340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00390-201ENST00000432331 Q9HAA7 133 aa4.9□□□□□ -1.63
LINC00390-201ENST00000432331 ESM1Q9NQ30 184 aa4.9□□□□□ -1.63
LINC00390-201ENST00000432331 ZNF580Q9UK33 172 aa4.9□□□□□ -1.63
LINC00390-201ENST00000432331 ZNF469Q96JG9 3925 aaPredicted RBP4.9□□□□□ -1.63
LINC00390-201ENST00000432331 ARHGAP32A7KAX9 2087 aa4.9□□□□□ -1.63
LINC00390-201ENST00000432331 SETXQ7Z333 2677 aaKnown RBP4.9□□□□□ -1.63
LINC00390-201ENST00000432331 PRYO14603 147 aa4.89□□□□□ -1.63
LINC00390-201ENST00000432331 IGF1P05019 195 aa4.89□□□□□ -1.63
LINC00390-201ENST00000432331 MIR7-3HGQ8N6C7 128 aa4.89□□□□□ -1.63
LINC00390-201ENST00000432331 TMEM254Q8TBM7 123 aa4.89□□□□□ -1.63
LINC00390-201ENST00000432331 ZNF702PQ9H963 129 aa4.89□□□□□ -1.63
LINC00390-201ENST00000432331 HIVEP2P31629 2446 aa4.89□□□□□ -1.63
LINC00390-201ENST00000432331 TEX15Q9BXT5 2789 aa4.88□□□□□ -1.63
LINC00390-201ENST00000432331 MED13LQ71F56 2210 aa4.88□□□□□ -1.63
LINC00390-201ENST00000432331 ABCA1O95477 2261 aa4.88□□□□□ -1.63
LINC00390-201ENST00000432331 A0A087WYN8 130 aa4.88□□□□□ -1.63
LINC00390-201ENST00000432331 CLPSL1A2RUU4 121 aa4.88□□□□□ -1.63
LINC00390-201ENST00000432331 TNP2Q05952 138 aa4.88□□□□□ -1.63
LINC00390-201ENST00000432331 NREPQ16612 68 aa4.88□□□□□ -1.63
LINC00390-201ENST00000432331 SOSTDC1Q6X4U4 206 aa4.88□□□□□ -1.63
LINC00390-201ENST00000432331 SVEP1Q4LDE5 3571 aa4.88□□□□□ -1.63
LINC00390-201ENST00000432331 CSPG4Q6UVK1 2322 aa4.88□□□□□ -1.63
LINC00390-201ENST00000432331 G3V318 75 aa4.87□□□□□ -1.63
LINC00390-201ENST00000432331 H3BUA1 57 aa4.87□□□□□ -1.63
LINC00390-201ENST00000432331 NCR3O14931 201 aa4.87□□□□□ -1.63
LINC00390-201ENST00000432331 LECT2O14960 151 aa4.87□□□□□ -1.63
LINC00390-201ENST00000432331 PRB4P10163 310 aaPredicted RBP4.87□□□□□ -1.63
LINC00390-201ENST00000432331 SMIM11BQ8TCY0 68 aa4.87□□□□□ -1.63
LINC00390-201ENST00000432331 SNURFQ9Y675 71 aa4.87□□□□□ -1.63
LINC00390-201ENST00000432331 ZANQ9Y493 2812 aa4.87□□□□□ -1.63
LINC00390-201ENST00000432331 IGHV3-16A0A0C4DH30 117 aa4.86□□□□□ -1.63
LINC00390-201ENST00000432331 IGKV2-29A2NJV5 120 aaPredicted RBP4.86□□□□□ -1.63
LINC00390-201ENST00000432331 GNRH2O43555 120 aa4.86□□□□□ -1.63
LINC00390-201ENST00000432331 LINC01547P58512 204 aaPredicted RBP4.86□□□□□ -1.63
LINC00390-201ENST00000432331 CD164L2Q6UWJ8 174 aa4.86□□□□□ -1.63
LINC00390-201ENST00000432331 Q6ZVQ6 151 aa4.86□□□□□ -1.63
LINC00390-201ENST00000432331 MPLKIPQ8TAP9 179 aa4.86□□□□□ -1.63
LINC00390-201ENST00000432331 FAM104AQ969W3 186 aa4.86□□□□□ -1.63
LINC00390-201ENST00000432331 SND1-IT1Q9HBX3 110 aa4.86□□□□□ -1.63
LINC00390-201ENST00000432331 CDKN2A-AS1Q9UH64 79 aa4.86□□□□□ -1.63
LINC00390-201ENST00000432331 CELSR1Q9NYQ6 3014 aa4.86□□□□□ -1.63
LINC00390-201ENST00000432331 ACANP16112 2415 aa4.86□□□□□ -1.63
LINC00390-201ENST00000432331 HIVEP1P15822 2718 aa4.86□□□□□ -1.63
LINC00390-201ENST00000432331 WNK2Q9Y3S1 2297 aa4.85□□□□□ -1.63
LINC00390-201ENST00000432331 A0A087WWL8 130 aa4.85□□□□□ -1.63
LINC00390-201ENST00000432331 hDV103S1A0JD37 113 aa4.85□□□□□ -1.63
LINC00390-201ENST00000432331 SMIM1B2RUZ4 78 aa4.85□□□□□ -1.63
LINC00390-201ENST00000432331 UBE2L6O14933 153 aa4.85□□□□□ -1.63
LINC00390-201ENST00000432331 C9orf66Q5T8R8 295 aa4.85□□□□□ -1.63
LINC00390-201ENST00000432331 Q9UF83 564 aa4.85□□□□□ -1.63
LINC00390-201ENST00000432331 F8P00451 2351 aa4.85□□□□□ -1.63
LINC00390-201ENST00000432331 TLN2Q9Y4G6 2542 aa4.85□□□□□ -1.63
LINC00390-201ENST00000432331 MAP1AP78559 2803 aaPredicted RBP4.85□□□□□ -1.63
LINC00390-201ENST00000432331 ANK3Q12955 4377 aaKnown RBP4.84□□□□□ -1.63
LINC00390-201ENST00000432331 NSD1Q96L73 2696 aaPredicted RBP4.84□□□□□ -1.63
LINC00390-201ENST00000432331 MAST4O15021 2626 aa4.84□□□□□ -1.63
LINC00390-201ENST00000432331 SONP18583 2426 aaKnown RBP4.84□□□□□ -1.63
LINC00390-201ENST00000432331 NACAE9PAV3 2078 aa4.84□□□□□ -1.63
LINC00390-201ENST00000432331 IGLV1-40P01703 118 aa4.84□□□□□ -1.63
LINC00390-201ENST00000432331 HOXD3P31249 432 aaPredicted RBP4.84□□□□□ -1.63
LINC00390-201ENST00000432331 UBE2AP49459 152 aa4.84□□□□□ -1.63
LINC00390-201ENST00000432331 RPL36AP83881 106 aaKnown RBP4.84□□□□□ -1.63
LINC00390-201ENST00000432331 FAM74A4Q5TZK3 123 aa4.84□□□□□ -1.63
LINC00390-201ENST00000432331 Q6ZQT0 140 aa4.84□□□□□ -1.63
LINC00390-201ENST00000432331 Q6ZTC4 211 aa4.84□□□□□ -1.63
LINC00390-201ENST00000432331 LINC00337Q8N6G1 96 aa4.84□□□□□ -1.63
LINC00390-201ENST00000432331 LINC01006Q8NI28 216 aa4.84□□□□□ -1.63
LINC00390-201ENST00000432331 RPL36ALQ969Q0 106 aaKnown RBP4.84□□□□□ -1.63
LINC00390-201ENST00000432331 USMG5Q96IX5 58 aa4.84□□□□□ -1.63
LINC00390-201ENST00000432331 CHCHD7Q9BUK0 85 aa4.84□□□□□ -1.63
LINC00390-201ENST00000432331 RBM12B-AS1Q9P1G2 102 aa4.84□□□□□ -1.63
LINC00390-201ENST00000432331 FN1P02751 2386 aaKnown RBP4.83□□□□□ -1.64
LINC00390-201ENST00000432331 IGKV2-28A0A075B6P5 120 aa4.83□□□□□ -1.64
LINC00390-201ENST00000432331 NDUFA4O00483 81 aa4.83□□□□□ -1.64
LINC00390-201ENST00000432331 IGKV2D-28P01615 120 aa4.83□□□□□ -1.64
LINC00390-201ENST00000432331 DEFB114Q30KQ6 69 aa4.83□□□□□ -1.64
LINC00390-201ENST00000432331 KHDC1LQ5JSQ8 128 aa4.83□□□□□ -1.64
LINC00390-201ENST00000432331 C9orf129Q5T035 196 aaKnown RBP4.83□□□□□ -1.64
LINC00390-201ENST00000432331 UNQ9165/PRO28630Q6UXU0 137 aa4.83□□□□□ -1.64
LINC00390-201ENST00000432331 PHF5AQ7RTV0 110 aaKnown RBP4.83□□□□□ -1.64
LINC00390-201ENST00000432331 C6orf223Q8N319 242 aa4.83□□□□□ -1.64
LINC00390-201ENST00000432331 Q8N3U1 123 aa4.83□□□□□ -1.64
LINC00390-201ENST00000432331 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.83□□□□□ -1.64
LINC00390-201ENST00000432331 C11orf44Q8N8P7 122 aa4.83□□□□□ -1.64
LINC00390-201ENST00000432331 S4R3C0 116 aa4.83□□□□□ -1.64
LINC00390-201ENST00000432331 IGHV1OR15-1A0A075B7D0 117 aa4.82□□□□□ -1.64
LINC00390-201ENST00000432331 A0A087WZ39 114 aa4.82□□□□□ -1.64
LINC00390-201ENST00000432331 VPREB1P12018 145 aa4.82□□□□□ -1.64
LINC00390-201ENST00000432331 PROK1P58294 105 aa4.82□□□□□ -1.64
LINC00390-201ENST00000432331 FAM229BQ4G0N7 80 aa4.82□□□□□ -1.64
LINC00390-201ENST00000432331 DGAT2L7PQ6IED9 249 aa4.82□□□□□ -1.64
LINC00390-201ENST00000432331 C10orf99Q6UWK7 81 aa4.82□□□□□ -1.64
LINC00390-201ENST00000432331 Q8N814 137 aa4.82□□□□□ -1.64
LINC00390-201ENST00000432331 WFDC9Q8NEX5 89 aa4.82□□□□□ -1.64
LINC00390-201ENST00000432331 LINC00588Q9Y4M8 146 aa4.82□□□□□ -1.64
LINC00390-201ENST00000432331 MTORP42345 2549 aa4.81□□□□□ -1.64
LINC00390-201ENST00000432331 TRAV10A0A0B4J240 114 aa4.81□□□□□ -1.64
LINC00390-201ENST00000432331 TRBV6-4A0A1B0GX49 114 aa4.81□□□□□ -1.64
LINC00390-201ENST00000432331 BPY2O14599 106 aa4.81□□□□□ -1.64
LINC00390-201ENST00000432331 LINC00242Q5T6M2 205 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms