RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 LYRM7Q5U5X0 104 aa13.31□□□□□ -0.28
VRK2-205ENST00000432057 WFDC10BQ8IUB3 73 aa13.31□□□□□ -0.28
VRK2-205ENST00000432057 C6orf226Q5I0X4 101 aa13.3□□□□□ -0.28
VRK2-205ENST00000432057 Q8IZM0 81 aa13.3□□□□□ -0.28
VRK2-205ENST00000432057 HUWE1Q7Z6Z7 4374 aaKnown RBP13.3□□□□□ -0.28
VRK2-205ENST00000432057 FOXI1Q12951 378 aa13.29□□□□□ -0.28
VRK2-205ENST00000432057 MTURNQ8N3F0 131 aa13.29□□□□□ -0.28
VRK2-205ENST00000432057 COPS9Q8WXC6 57 aa13.29□□□□□ -0.28
VRK2-205ENST00000432057 MIR7-3HGQ8N6C7 128 aa13.29□□□□□ -0.28
VRK2-205ENST00000432057 PRR34Q9NV39 138 aa13.29□□□□□ -0.28
VRK2-205ENST00000432057 TCL1BO95988 128 aa13.28□□□□□ -0.28
VRK2-205ENST00000432057 MGAM2Q2M2H8 2515 aa13.28□□□□□ -0.28
VRK2-205ENST00000432057 SCGB1C2P0DMR2 95 aa13.27□□□□□ -0.28
VRK2-205ENST00000432057 RPL13AP40429 203 aaKnown RBP13.27□□□□□ -0.28
VRK2-205ENST00000432057 LINC00158P58513 81 aa13.27□□□□□ -0.28
VRK2-205ENST00000432057 ENHOQ6UWT2 76 aa13.27□□□□□ -0.28
VRK2-205ENST00000432057 C2orf82Q6UX34 121 aa13.27□□□□□ -0.28
VRK2-205ENST00000432057 GAGE12HA6NDE8 117 aa13.27□□□□□ -0.29
VRK2-205ENST00000432057 MALP21145 153 aa13.27□□□□□ -0.29
VRK2-205ENST00000432057 ESRGQ1W209 222 aa13.27□□□□□ -0.29
VRK2-205ENST00000432057 IBA57-AS1B1ANH7 110 aa13.26□□□□□ -0.29
VRK2-205ENST00000432057 PFN2P35080 140 aa13.25□□□□□ -0.29
VRK2-205ENST00000432057 PRO0461Q9UI25 63 aa13.25□□□□□ -0.29
VRK2-205ENST00000432057 TRIAP1O43715 76 aa13.25□□□□□ -0.29
VRK2-205ENST00000432057 KIAA0087Q14695 138 aa13.25□□□□□ -0.29
VRK2-205ENST00000432057 F8W1H4 67 aa13.24□□□□□ -0.29
VRK2-205ENST00000432057 CRPP02741 224 aa13.24□□□□□ -0.29
VRK2-205ENST00000432057 WFDC2Q14508 124 aa13.24□□□□□ -0.29
VRK2-205ENST00000432057 OCIAD2Q56VL3 154 aa13.24□□□□□ -0.29
VRK2-205ENST00000432057 UBE2WQ96B02 151 aa13.24□□□□□ -0.29
VRK2-205ENST00000432057 CFAP161Q6P656 301 aa13.23□□□□□ -0.29
VRK2-205ENST00000432057 PPDPFQ9H3Y8 114 aa13.23□□□□□ -0.29
VRK2-205ENST00000432057 TRBV20-1A0A075B6N2 111 aa13.23□□□□□ -0.29
VRK2-205ENST00000432057 TRBV30A0A0K0K1B3 111 aa13.23□□□□□ -0.29
VRK2-205ENST00000432057 CKS1BP61024 79 aa13.23□□□□□ -0.29
VRK2-205ENST00000432057 TRAV10A0A0B4J240 114 aa13.22□□□□□ -0.29
VRK2-205ENST00000432057 CCL18P55774 89 aa13.2□□□□□ -0.3
VRK2-205ENST00000432057 CXCL5P42830 114 aa13.19□□□□□ -0.3
VRK2-205ENST00000432057 SND1-IT1Q9HBX3 110 aa13.19□□□□□ -0.3
VRK2-205ENST00000432057 SMCPP49901 116 aaPredicted RBP13.18□□□□□ -0.3
VRK2-205ENST00000432057 SPAG11BQ08648 103 aa13.18□□□□□ -0.3
VRK2-205ENST00000432057 KLK5Q9Y337 293 aaPredicted RBP13.18□□□□□ -0.3
VRK2-205ENST00000432057 TRAV8-4A0A0B4J246 113 aa13.17□□□□□ -0.3
VRK2-205ENST00000432057 C6orf223Q8N319 242 aa13.16□□□□□ -0.3
VRK2-205ENST00000432057 LINC00526Q96FQ7 95 aa13.16□□□□□ -0.3
VRK2-205ENST00000432057 IGKV2-28A0A075B6P5 120 aa13.15□□□□□ -0.3
VRK2-205ENST00000432057 IGKV2D-28P01615 120 aa13.15□□□□□ -0.3
VRK2-205ENST00000432057 COL7A1Q02388 2944 aa13.15□□□□□ -0.31
VRK2-205ENST00000432057 K7ERU9 68 aa13.14□□□□□ -0.31
VRK2-205ENST00000432057 ATXN8Q156A1 80 aa13.14□□□□□ -0.31
VRK2-205ENST00000432057 KRTAP21-3Q3LHN1 58 aa13.14□□□□□ -0.31
VRK2-205ENST00000432057 ETDBQ3ZM63 59 aa13.14□□□□□ -0.31
VRK2-205ENST00000432057 C9orf116Q5BN46 136 aaPredicted RBP13.14□□□□□ -0.31
VRK2-205ENST00000432057 LINC01556Q5JQF7 62 aa13.14□□□□□ -0.31
VRK2-205ENST00000432057 C15orf53Q8NAA6 179 aa13.14□□□□□ -0.31
VRK2-205ENST00000432057 COX6CP09669 75 aa13.14□□□□□ -0.31
VRK2-205ENST00000432057 LINC00337Q8N6G1 96 aa13.14□□□□□ -0.31
VRK2-205ENST00000432057 CLEC2BQ92478 149 aa13.14□□□□□ -0.31
VRK2-205ENST00000432057 DNAH9Q9NYC9 4486 aa13.13□□□□□ -0.31
VRK2-205ENST00000432057 C10orf25Q5T742 122 aa13.12□□□□□ -0.31
VRK2-205ENST00000432057 KRTAP26-1Q6PEX3 210 aa13.12□□□□□ -0.31
VRK2-205ENST00000432057 TRAV13-2A0A0B4J235 113 aa13.12□□□□□ -0.31
VRK2-205ENST00000432057 RNF151Q2KHN1 245 aa13.12□□□□□ -0.31
VRK2-205ENST00000432057 UNQ6190/PRO20217Q6UXQ8 127 aa13.12□□□□□ -0.31
VRK2-205ENST00000432057 C9JAW5 83 aa13.11□□□□□ -0.31
VRK2-205ENST00000432057 COX17Q14061 63 aa13.1□□□□□ -0.31
VRK2-205ENST00000432057 LINC01620Q4KN68 170 aa13.1□□□□□ -0.31
VRK2-205ENST00000432057 LINC00588Q9Y4M8 146 aa13.1□□□□□ -0.31
VRK2-205ENST00000432057 DNAH10OSP0CZ25 163 aa13.08□□□□□ -0.32
VRK2-205ENST00000432057 SLC25A20O43772 301 aa13.08□□□□□ -0.32
VRK2-205ENST00000432057 LST1O00453 97 aa13.07□□□□□ -0.32
VRK2-205ENST00000432057 C1orf43Q9BWL3 253 aa13.07□□□□□ -0.32
VRK2-205ENST00000432057 HIGD2BQ4VC39 106 aa13.06□□□□□ -0.32
VRK2-205ENST00000432057 NTN5Q8WTR8 489 aaPredicted RBP13.06□□□□□ -0.32
VRK2-205ENST00000432057 IGKV2D-24A0A075B6R9 120 aa13.05□□□□□ -0.32
VRK2-205ENST00000432057 STAB2Q8WWQ8 2551 aa13.04□□□□□ -0.32
VRK2-205ENST00000432057 C15orf56Q8N910 161 aa13.04□□□□□ -0.32
VRK2-205ENST00000432057 B9D2Q9BPU9 175 aa13.04□□□□□ -0.32
VRK2-205ENST00000432057 Q9HAA7 133 aa13.04□□□□□ -0.32
VRK2-205ENST00000432057 RPL28P46779 137 aaKnown RBP13.04□□□□□ -0.32
VRK2-205ENST00000432057 ANKRD29Q8N6D5 301 aa13.03□□□□□ -0.32
VRK2-205ENST00000432057 C6orf48Q9UBA6 75 aa13.03□□□□□ -0.32
VRK2-205ENST00000432057 ZNF561-AS1K7EIQ3 104 aa13.02□□□□□ -0.32
VRK2-205ENST00000432057 TEN1Q86WV5 123 aa13.02□□□□□ -0.32
VRK2-205ENST00000432057 OR13C6PQ8NH95 151 aa13.02□□□□□ -0.32
VRK2-205ENST00000432057 SMIM11BQ8TCY0 68 aa13.02□□□□□ -0.32
VRK2-205ENST00000432057 GVQW2A0A096LPI5 108 aaPredicted RBP13.02□□□□□ -0.33
VRK2-205ENST00000432057 TRBV10-2A0A0K0K1G8 114 aa13.02□□□□□ -0.33
VRK2-205ENST00000432057 PRR3P79522 188 aaKnown RBP13.02□□□□□ -0.33
VRK2-205ENST00000432057 M0QXV9 152 aa13.01□□□□□ -0.33
VRK2-205ENST00000432057 VPS25Q9BRG1 176 aa13.01□□□□□ -0.33
VRK2-205ENST00000432057 Q8NDZ9 215 aa13□□□□□ -0.33
VRK2-205ENST00000432057 NDUFC2O95298 119 aa12.99□□□□□ -0.33
VRK2-205ENST00000432057 CAMK2N2Q96S95 79 aa12.99□□□□□ -0.33
VRK2-205ENST00000432057 DNAH1Q9P2D7 4330 aa12.99□□□□□ -0.33
VRK2-205ENST00000432057 CARD19Q96LW7 228 aa12.98□□□□□ -0.33
VRK2-205ENST00000432057 FAM218AQ96MZ4 157 aa12.98□□□□□ -0.33
VRK2-205ENST00000432057 MUC7Q8TAX7 377 aa12.97□□□□□ -0.33
VRK2-205ENST00000432057 NCR3O14931 201 aa12.97□□□□□ -0.33
VRK2-205ENST00000432057 PPDPFLQ8WWR9 84 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms